Interactive Phylogenetics Module

Gene Id
Zm00007a00023329

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00007a00023329 Zea mays B104 HOM04x5M003355 ORTHO04x5M004677 0.0e+00 1278.5 761 100.0
Zm00001d047128 Zea mays B73 HOM04x5M003355 ORTHO04x5M004677 0.0e+00 1276.9 761 99.9
Zm00008a035059 Zea mays PH207 HOM04x5M003355 ORTHO04x5M004677 0.0e+00 1235.3 697 99.9
Sobic.001G305700 Sorghum bicolor HOM04x5M003355 ORTHO04x5M004677 0.0e+00 1176.4 764 91.9
Sspon.01G0013910-3C Saccharum spontaneum HOM04x5M003355 ORTHO04x5M004677 0.0e+00 1147.1 758 91.4
Misin02G278200 Miscanthus sinensis HOM04x5M003355 ORTHO04x5M004677 0.0e+00 1142.9 765 90.2
Sspon.01G0013910-1A Saccharum spontaneum HOM04x5M003355 ORTHO04x5M004677 0.0e+00 1120.1 765 89.8
OB10G24860 Oryza brachyantha HOM04x5M003355 ORTHO04x5M004677 0.0e+00 1109.4 767 80.8
Seita.9G333200 Setaria italica HOM04x5M003355 ORTHO04x5M004677 0.0e+00 1099.3 764 86.4
OsR498G1019142000.01 Oryza sativa ssp. indica HOM04x5M003355 ORTHO04x5M004677 0.0e+00 1090.1 770 81.6
LOC_Os10g40130 Oryza sativa ssp. japonica HOM04x5M003355 ORTHO04x5M004677 0.0e+00 1088.6 770 81.6
Bradi3g32820 Brachypodium distachyon HOM04x5M003355 ORTHO04x5M004677 0.0e+00 1084.3 769 80.2
Oropetium_20150105_22050 Oropetium thomaeum HOM04x5M003355 ORTHO04x5M004677 4.1e-312 1072.8 697 83.1
Pgl_GLEAN_10035164 Cenchrus americanus HOM04x5M003355 ORTHO04x5M004677 5.4e-311 1069.3 694 86.7
Zjn_sc00102.1.g00600.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003355 ORTHO04x5M004677 4.7e-307 1056.2 703 84.5
LP029848 Lolium perenne HOM04x5M003355 ORTHO04x5M004677 2.2e-304 1047.3 701 78.5
TraesCS1A02G208400 Triticum aestivum HOM04x5M003355 ORTHO04x5M004677 1.4e-303 1044.6 701 83.2
TraesCS1B02G222400 Triticum aestivum HOM04x5M003355 ORTHO04x5M004677 4.5e-302 1039.6 766 77.8
TRITD1Bv1G128980 Triticum turgidum HOM04x5M003355 ORTHO04x5M004677 3.6e-299 1030.0 766 81.3
PH01000377G0960 Phyllostachys edulis HOM04x5M003355 ORTHO04x5M004677 3.0e-298 1026.9 706 77.2
TraesCS1D02G211600 Triticum aestivum HOM04x5M003355 ORTHO04x5M004677 4.9e-296 1019.6 701 82.5
HORVU1Hr1G053310 Hordeum vulgare HOM04x5M003355 ORTHO04x5M004677 8.1e-283 975.7 703 79.4
Sspon.01G0013910-2B Saccharum spontaneum HOM04x5M003355 ORTHO04x5M004677 1.1e-274 948.7 539 94.4
Misin01G288600 Miscanthus sinensis HOM04x5M003355 ORTHO04x5M004677 2.7e-270 934.1 566 86.2
Sspon.01G0013910-4D Saccharum spontaneum HOM04x5M003355 ORTHO04x5M004677 9.6e-236 819.3 612 87.9
Aco011760 Ananas comosus HOM04x5M003355 ORTHO04x5M004677 5.3e-234 813.5 732 63.8
Ma05_g12140 Musa acuminata HOM04x5M003355 ORTHO04x5M004677 1.9e-231 805.1 714 62.3
TRITD1Av1G134900 Triticum turgidum HOM04x5M003355 ORTHO04x5M004677 9.0e-226 786.2 488 82.0
p5.00_sc00097_p0008 Elaeis guineensis HOM04x5M003355 ORTHO04x5M004677 4.2e-223 777.3 658 63.1
CALSI_Maker00009677 Calamus simplicifolius HOM04x5M003355 ORTHO04x5M004677 1.7e-219 765.4 655 62.3
evm.TU.AsparagusV1_Unassigned.219.V1.1 Asparagus officinalis HOM04x5M003355 ORTHO04x5M004677 1.0e-216 756.1 708 58.1
ASH_gene11961 Apostasia shenzhenica HOM04x5M003355 ORTHO04x5M004677 1.6e-214 748.8 649 60.1
Potri.001G103300 Populus trichocarpa HOM04x5M003355 ORTHO04x5M004677 7.9e-214 746.5 709 56.7
Solyc08g081170.2 Solanum lycopersicum HOM04x5M003355 ORTHO04x5M004677 2.8e-211 738.0 718 57.1
Zosma16g00460 Zostera marina HOM04x5M003355 ORTHO04x5M004677 3.7e-211 737.6 721 55.6
Spipo1G0029900 Spirodela polyrhiza HOM04x5M003355 ORTHO04x5M004677 3.1e-210 734.6 706 58.5
ATR0680G162 Amborella trichopoda HOM04x5M003355 ORTHO04x5M004677 1.0e-208 729.6 709 55.4
PEQU_22706 Phalaenopsis equestris HOM04x5M003355 ORTHO04x5M004677 4.0e-205 717.6 703 57.9
AT1G63680 Arabidopsis thaliana HOM04x5M003355 ORTHO04x5M004677 5.0e-200 700.7 712 55.6
CALSI_Maker00016688 Calamus simplicifolius HOM04x5M003355 ORTHO04x5M004677 3.8e-192 674.5 607 60.5
Pp3c24_18820 Physcomitrium patens HOM04x5M003355 ORTHO04x5M004677 3.3e-175 618.2 646 52.5
Mapoly0091s0082 Marchantia polymorpha HOM04x5M003355 ORTHO04x5M004677 1.0e-173 613.2 539 57.0
p5.00_sc00017_p0168 Elaeis guineensis HOM04x5M003355 ORTHO04x5M004677 3.3e-167 591.7 532 57.3
p5.00_sc00197_p0046 Elaeis guineensis HOM04x5M003355 ORTHO04x5M004677 1.7e-163 579.3 533 55.7
gene13859 Selaginella moellendorffii HOM04x5M003355 ORTHO04x5M004677 2.2e-163 578.9 561 54.0
gene30760 Selaginella moellendorffii HOM04x5M003355 ORTHO04x5M004677 2.2e-163 578.9 561 54.0
ASH_gene14768 Apostasia shenzhenica HOM04x5M003355 ORTHO04x5M004677 1.4e-162 576.2 542 54.6
CALSI_Maker00021578 Calamus simplicifolius HOM04x5M003355 ORTHO04x5M004677 3.4e-156 555.1 533 52.7
evm.TU.AsparagusV1_07.2213.V1.1 Asparagus officinalis HOM04x5M003355 ORTHO04x5M004677 5.8e-156 554.3 536 51.7
GSVIVG01019746001 Vitis vinifera HOM04x5M003355 ORTHO04x5M004677 2.9e-155 552.0 310 85.2
PEQU_17496 Phalaenopsis equestris HOM04x5M003355 ORTHO04x5M004677 5.6e-151 537.7 549 51.0
evm.TU.AsparagusV1_Unassigned.218.V1.1 Asparagus officinalis HOM04x5M003355 ORTHO04x5M004677 2.4e-149 532.3 551 49.2
Pp3c23_15810 Physcomitrium patens HOM04x5M003355 ORTHO04x5M004677 9.3e-146 520.4 514 52.7
evm.TU.AsparagusV1_07.2214.V1.1 Asparagus officinalis HOM04x5M003355 ORTHO04x5M004677 6.0e-145 517.7 539 49.2
Aco010253 Ananas comosus HOM04x5M003355 ORTHO04x5M004677 2.3e-144 515.8 532 49.1
Ma10_g07880 Musa acuminata HOM04x5M003355 ORTHO04x5M004677 3.6e-134 481.9 546 49.6
p5.00_sc00196_p0006 Elaeis guineensis HOM04x5M003355 ORTHO04x5M004677 7.9e-129 464.2 533 47.7
Ma10_g07890 Musa acuminata HOM04x5M003355 ORTHO04x5M004677 2.4e-125 452.6 515 49.3
Ma10_g07900 Musa acuminata HOM04x5M003355 ORTHO04x5M004677 1.3e-115 420.2 468 50.2
PAB00064689 Picea abies HOM04x5M003355 ORTHO04x5M004677 3.2e-114 415.6 494 50.2
CALSI_Maker00046832 Calamus simplicifolius HOM04x5M003355 ORTHO04x5M004677 3.1e-93 345.9 533 39.8
CALSI_Maker00012390 Calamus simplicifolius HOM04x5M003355 ORTHO04x5M004677 5.9e-92 341.7 255 62.7
ASH_gene19923 Apostasia shenzhenica HOM04x5M003355 ORTHO04x5M004677 2.3e-88 329.7 400 47.0
MCO12G378 Micromonas commoda HOM04x5M003355 ORTHO04x5M004677 1.6e-76 290.4 495 37.2
CALSI_Maker00020244 Calamus simplicifolius HOM04x5M003355 ORTHO04x5M004677 7.0e-69 265.0 239 57.3
Cre12.g519900 Chlamydomonas reinhardtii HOM04x5M003355 ORTHO04x5M004677 2.0e-63 246.9 714 32.8
CALSI_Maker00036353 Calamus simplicifolius HOM04x5M003355 ORTHO04x5M004677 2.2e-38 163.7 246 41.1
ASH_gene8599 Apostasia shenzhenica HOM04x5M003355 ORTHO04x5M004677 9.2e-37 158.3 137 48.9
CALSI_Maker00046826 Calamus simplicifolius HOM04x5M003355 ORTHO04x5M002569 2.1e-33 147.1 332 30.7
Ma05_g16890 Musa acuminata HOM04x5M003355 ORTHO04x5M094184 3.0e-11 73.6 79 49.4
CALSI_Maker00002475 Calamus simplicifolius HOM04x5M003355 ORTHO04x5M065074 3.9e-11 73.2 121 34.7
Aco001969 Ananas comosus HOM04x5M003355 ORTHO04x5M032002 1.5e-07 61.2 121 47.1
CALSI_Maker00035849 Calamus simplicifolius HOM04x5M003355 ORTHO04x5M065736 2.0e-07 60.8 114 34.2

Amborella trichopoda (1 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (4 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (10 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (4 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (5 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings