Interactive Phylogenetics Module

Gene Id
Zm00007a00020034

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00007a00020034 Zea mays B104 HOM04x5M005130 ORTHO04x5M030950 1.1e-79 298.5 145 100.0
Zm00001d021258 Zea mays B73 HOM04x5M000032 ORTHO04x5M000037 3.2e-39 164.1 148 62.8
Zm00007a00003740 Zea mays B104 HOM04x5M004053 ORTHO04x5M004830 2.1e-30 134.8 130 62.3
Zm00001d012536 Zea mays B73 HOM04x5M005130 ORTHO04x5M006265 1.8e-29 131.7 105 65.7
Zm00007a00040066 Zea mays B104 HOM04x5M005130 ORTHO04x5M006265 1.8e-29 131.7 105 65.7
Zm00008a033044 Zea mays PH207 HOM04x5M005130 ORTHO04x5M006265 1.8e-29 131.7 105 65.7
Misin05G310200 Miscanthus sinensis HOM04x5M005130 ORTHO04x5M006265 2.5e-28 127.9 105 64.8
Sobic.003G332500 Sorghum bicolor HOM04x5M005130 ORTHO04x5M006265 2.5e-28 127.9 105 64.8
Seita.5G356500 Setaria italica HOM04x5M005130 ORTHO04x5M006265 2.5e-28 127.9 105 64.8
Sspon.03G0030110-1B Saccharum spontaneum HOM04x5M005130 ORTHO04x5M006265 1.7e-27 125.2 102 65.7
Zm00007a00027511 Zea mays B104 HOM04x5M005130 ORTHO04x5M006265 1.7e-27 125.2 105 63.8
Sspon.03G0030110-1P Saccharum spontaneum HOM04x5M005130 ORTHO04x5M006265 2.8e-27 124.4 82 78.0
TRITD3Av1G208300 Triticum turgidum HOM04x5M005130 ORTHO04x5M006265 2.8e-27 124.4 109 63.3
Misin06G299600 Miscanthus sinensis HOM04x5M005130 ORTHO04x5M006265 3.7e-27 124.0 85 75.3
TraesCS3B02G368700 Triticum aestivum HOM04x5M005130 ORTHO04x5M006265 8.2e-27 122.9 83 75.9
TraesCS3A02G337500 Triticum aestivum HOM04x5M005130 ORTHO04x5M006265 8.2e-27 122.9 83 75.9
TRITD3Bv1G188530 Triticum turgidum HOM04x5M005130 ORTHO04x5M006265 8.2e-27 122.9 83 75.9
Zm00001d043112 Zea mays B73 HOM04x5M005130 ORTHO04x5M006265 1.4e-26 122.1 105 62.9
HORVU3Hr1G079710 Hordeum vulgare HOM04x5M005130 ORTHO04x5M006265 1.8e-26 121.7 83 74.7
Zm00008a032699 Zea mays PH207 HOM04x5M000032 ORTHO04x5M000137 4.1e-26 120.6 61 96.7
Zm00008a034029 Zea mays PH207 HOM04x5M004053 ORTHO04x5M030950 6.9e-26 119.8 56 96.4
Sspon.03G0030110-2C Saccharum spontaneum HOM04x5M005130 ORTHO04x5M006265 9.1e-26 119.4 116 57.8
evm.TU.AsparagusV1_08.3241.V1.1 Asparagus officinalis HOM04x5M005130 ORTHO04x5M006265 1.2e-25 119.0 102 59.8
Zjn_sc00040.1.g03120.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005130 ORTHO04x5M006265 2.6e-25 117.9 102 62.7
Aco007189 Ananas comosus HOM04x5M005130 ORTHO04x5M006265 3.4e-25 117.5 83 71.1
Bradi2g53090 Brachypodium distachyon HOM04x5M005130 ORTHO04x5M006265 5.9e-25 116.7 96 65.6
OB01G43660 Oryza brachyantha HOM04x5M005130 ORTHO04x5M006265 7.7e-25 116.3 83 72.3
PEQU_16026 Phalaenopsis equestris HOM04x5M005130 ORTHO04x5M006265 1.0e-24 115.9 85 68.2
LOC_Os01g59800 Oryza sativa ssp. japonica HOM04x5M005130 ORTHO04x5M006265 2.9e-24 114.4 83 71.1
OsR498G0102200600.01 Oryza sativa ssp. indica HOM04x5M005130 ORTHO04x5M006265 6.5e-24 113.2 83 69.9
Ma03_g03450 Musa acuminata HOM04x5M005130 ORTHO04x5M006265 1.1e-23 112.5 83 68.7
CALSI_Maker00002081 Calamus simplicifolius HOM04x5M005130 ORTHO04x5M006265 1.9e-23 111.7 93 62.4
p5.00_sc00015_p0121 Elaeis guineensis HOM04x5M005130 ORTHO04x5M006265 1.9e-23 111.7 83 67.5
Zm00007a00010655 Zea mays B104 HOM04x5M004053 ORTHO04x5M004830 7.2e-23 109.8 189 40.7
Pgl_GLEAN_10000993 Cenchrus americanus HOM04x5M005130 ORTHO04x5M006265 1.6e-22 108.6 116 54.3
ASH_gene16758 Apostasia shenzhenica HOM04x5M005130 ORTHO04x5M006265 3.6e-22 107.5 83 62.7
Potri.010G246400 Populus trichocarpa HOM04x5M005130 ORTHO04x5M006265 8.8e-21 102.8 95 55.8
ATR0068G025 Amborella trichopoda HOM04x5M005130 ORTHO04x5M006265 1.7e-19 98.6 60 78.3
GSVIVG01027217001 Vitis vinifera HOM04x5M005130 ORTHO04x5M006265 1.7e-19 98.6 93 54.8
GSVIVG01010707001 Vitis vinifera HOM04x5M005130 ORTHO04x5M006265 2.8e-19 97.8 93 54.8
Solyc01g096910.2 Solanum lycopersicum HOM04x5M005130 ORTHO04x5M006265 1.1e-18 95.9 83 57.8
Zosma18g01020 Zostera marina HOM04x5M005130 ORTHO04x5M006265 1.4e-18 95.5 83 60.2
PH01000009G0360 Phyllostachys edulis HOM04x5M005130 ORTHO04x5M006265 1.8e-18 95.1 72 69.4
Oropetium_20150105_18656 Oropetium thomaeum HOM04x5M005130 ORTHO04x5M006265 4.1e-18 94.0 73 71.2
PH01000029G2170 Phyllostachys edulis HOM04x5M005130 ORTHO04x5M006265 1.0e-16 89.4 73 64.4
Spipo22G0020900 Spirodela polyrhiza HOM04x5M005130 ORTHO04x5M006265 1.0e-16 89.4 85 51.8
AT5G04920 Arabidopsis thaliana HOM04x5M005130 ORTHO04x5M006265 4.2e-15 84.0 83 50.6
Zm00001d050161 Zea mays B73 HOM04x5M004053 ORTHO04x5M004830 5.5e-15 83.6 41 87.8
PAB00004295 Picea abies HOM04x5M005130 ORTHO04x5M006265 2.3e-13 78.2 61 62.3
Mapoly0072s0023 Marchantia polymorpha HOM04x5M005130 ORTHO04x5M006265 1.1e-12 75.9 100 42.0
Pp3c23_21630 Physcomitrium patens HOM04x5M005130 ORTHO04x5M006265 8.2e-11 69.7 93 38.7
gene37060 Selaginella moellendorffii HOM04x5M005130 ORTHO04x5M006265 9.1e-10 66.2 85 43.5
Zm00001d002560 Zea mays B73 HOM04x5M001827 ORTHO04x5M001967 1.2e-09 65.9 47 72.3
Zm00001d031734 Zea mays B73 HOM04x5M011436 ORTHO04x5M013228 2.0e-09 65.1 31 100.0
Zm00001d043471 Zea mays B73 HOM04x5M004054 ORTHO04x5M004697 2.0e-09 65.1 31 100.0
Zm00007a00038438 Zea mays B104 HOM04x5M001827 ORTHO04x5M001967 2.0e-09 65.1 31 100.0
Zm00007a00002447 Zea mays B104 HOM04x5M002112 ORTHO04x5M249839 2.0e-09 65.1 31 100.0
Zm00007a00005154 Zea mays B104 HOM04x5M001827 ORTHO04x5M001967 2.0e-09 65.1 31 100.0
Zm00007a00043400 Zea mays B104 HOM04x5M011436 ORTHO04x5M013228 2.0e-09 65.1 31 100.0
Zm00007a00012809 Zea mays B104 HOM04x5M004054 ORTHO04x5M004697 2.0e-09 65.1 31 100.0
Zm00007a00016981 Zea mays B104 HOM04x5M001827 ORTHO04x5M001967 2.0e-09 65.1 31 100.0
Zm00008a013833 Zea mays PH207 HOM04x5M004054 ORTHO04x5M004697 2.0e-09 65.1 31 100.0
Zm00007a00037326 Zea mays B104 HOM04x5M000051 ORTHO04x5M000285 2.6e-09 64.7 31 96.8
gene31810 Selaginella moellendorffii HOM04x5M005130 ORTHO04x5M006265 5.9e-09 63.5 85 42.4
Zm00001d038143 Zea mays B73 HOM04x5M000051 ORTHO04x5M000285 5.9e-09 63.5 31 96.8
Zm00007a00010707 Zea mays B104 HOM04x5M000051 ORTHO04x5M000285 5.9e-09 63.5 31 96.8
Zm00008a025760 Zea mays PH207 HOM04x5M000051 ORTHO04x5M000285 5.9e-09 63.5 31 96.8
Misin16G133700 Miscanthus sinensis HOM04x5M000051 ORTHO04x5M000285 1.3e-08 62.4 31 93.5
Misin17G134100 Miscanthus sinensis HOM04x5M000051 ORTHO04x5M000285 1.3e-08 62.4 31 93.5
PAB00030332 Picea abies HOM04x5M005130 ORTHO04x5M006265 1.3e-08 62.4 93 41.9
Sspon.07G0008370-1A Saccharum spontaneum HOM04x5M000051 ORTHO04x5M000285 1.3e-08 62.4 31 93.5
Sspon.07G0008370-1T Saccharum spontaneum HOM04x5M000051 ORTHO04x5M000285 1.3e-08 62.4 31 93.5
Sspon.07G0008370-3C Saccharum spontaneum HOM04x5M000051 ORTHO04x5M000285 1.3e-08 62.4 31 93.5
Sspon.07G0008370-2B Saccharum spontaneum HOM04x5M000051 ORTHO04x5M000285 1.3e-08 62.4 31 93.5
Sspon.07G0008370-4D Saccharum spontaneum HOM04x5M000051 ORTHO04x5M000285 1.3e-08 62.4 31 93.5
PAB00004327 Picea abies HOM04x5M005130 ORTHO04x5M006265 2.2e-08 61.6 68 51.5
Sobic.009G130600 Sorghum bicolor HOM04x5M000051 ORTHO04x5M000285 2.9e-08 61.2 31 90.3
Zm00008a013534 Zea mays PH207 HOM04x5M005130 ORTHO04x5M006265 3.8e-08 60.8 27 100.0
Pgl_GLEAN_10008888 Cenchrus americanus HOM04x5M000051 ORTHO04x5M000285 5.0e-08 60.5 31 90.3
PH01000011G1890 Phyllostachys edulis HOM04x5M000051 ORTHO04x5M000285 6.5e-08 60.1 31 90.3
TraesCS1D02G250700 Triticum aestivum HOM04x5M000051 ORTHO04x5M000285 6.5e-08 60.1 31 90.3
TraesCS1B02G261700 Triticum aestivum HOM04x5M000051 ORTHO04x5M000285 6.5e-08 60.1 31 90.3
TRITD1Bv1G146410 Triticum turgidum HOM04x5M000051 ORTHO04x5M000285 6.5e-08 60.1 31 90.3
Bradi2g25920 Brachypodium distachyon HOM04x5M000051 ORTHO04x5M000285 1.5e-07 58.9 31 87.1
Seita.3G249700 Setaria italica HOM04x5M000051 ORTHO04x5M000285 1.5e-07 58.9 31 87.1
LP004555 Lolium perenne HOM04x5M000051 ORTHO04x5M000285 2.5e-07 58.2 31 87.1
Zjn_sc00025.1.g01090.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M000051 ORTHO04x5M000285 2.5e-07 58.2 31 87.1
CALSI_Maker00041240 Calamus simplicifolius HOM04x5M000051 ORTHO04x5M000285 3.2e-07 57.8 31 87.1
HORVU1Hr1G061820 Hordeum vulgare HOM04x5M000051 ORTHO04x5M000285 3.2e-07 57.8 31 87.1
Ma10_g12640 Musa acuminata HOM04x5M000051 ORTHO04x5M000285 3.2e-07 57.8 31 87.1
TraesCS1A02G251100 Triticum aestivum HOM04x5M000051 ORTHO04x5M000285 3.2e-07 57.8 31 87.1
TRITD1Av1G160790 Triticum turgidum HOM04x5M000051 ORTHO04x5M000285 3.2e-07 57.8 31 87.1
p5.00_sc00108_p0040 Elaeis guineensis HOM04x5M000051 ORTHO04x5M000285 7.2e-07 56.6 31 83.9
LOC_Os05g33270 Oryza sativa ssp. japonica HOM04x5M000051 ORTHO04x5M000285 1.6e-06 55.5 31 83.9
OsR498G0510795700.01 Oryza sativa ssp. indica HOM04x5M000051 ORTHO04x5M000285 1.6e-06 55.5 31 83.9
Oropetium_20150105_05140 Oropetium thomaeum HOM04x5M000051 ORTHO04x5M000285 2.7e-06 54.7 31 80.6
ASH_gene5041 Apostasia shenzhenica HOM04x5M000051 ORTHO04x5M000285 4.7e-06 53.9 31 80.6
OB05G23670 Oryza brachyantha HOM04x5M000051 ORTHO04x5M000285 4.7e-06 53.9 31 80.6
PEQU_01909 Phalaenopsis equestris HOM04x5M000051 ORTHO04x5M000285 4.7e-06 53.9 31 77.4
Aco025013 Ananas comosus HOM04x5M000051 ORTHO04x5M000285 6.1e-06 53.5 31 80.6

Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (1 genes)
Picea abies (3 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (8 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (5 genes)
Triticum turgidum (4 genes)
Vitis vinifera (2 genes)
Zea mays B73 (8 genes)
Zea mays B104 (13 genes)
Zea mays PH207 (6 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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