Interactive Phylogenetics Module

Gene Id
Zm00007a00015682

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00007a00015682 Zea mays B104 HOM04x5M003245 ORTHO04x5M005668 1.1e-280 968.0 482 100.0
Zm00001d017492 Zea mays B73 HOM04x5M003245 ORTHO04x5M005668 3.1e-280 966.5 481 99.8
Sspon.01G0000930-1P Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 1.8e-251 870.9 483 91.9
Seita.1G260300 Setaria italica HOM04x5M003245 ORTHO04x5M005668 1.5e-247 857.8 483 89.9
Sspon.01G0000930-3D Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 5.2e-243 842.8 485 89.5
Sspon.01G0000930-1A Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 4.1e-240 833.2 485 88.5
Misin08G230600 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 1.5e-234 814.7 449 92.4
Oropetium_20150105_21240 Oropetium thomaeum HOM04x5M003245 ORTHO04x5M005668 4.4e-234 813.1 484 85.7
Misin07G434300 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 9.4e-229 795.4 442 92.1
HORVU6Hr1G063100 Hordeum vulgare HOM04x5M003245 ORTHO04x5M005668 1.9e-221 771.2 483 82.0
TraesCS6A02G249800 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 2.1e-220 767.7 483 82.2
TRITD6Av1G159240 Triticum turgidum HOM04x5M003245 ORTHO04x5M005668 2.1e-220 767.7 483 82.2
TraesCS6B02G275600 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 1.8e-219 764.6 482 82.0
TRITD6Bv1G145190 Triticum turgidum HOM04x5M003245 ORTHO04x5M005668 1.8e-219 764.6 482 82.0
Bradi3g50726 Brachypodium distachyon HOM04x5M003245 ORTHO04x5M005668 3.4e-218 760.4 481 80.9
TraesCS6D02G231500 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 3.7e-217 756.9 482 81.1
LP006587 Lolium perenne HOM04x5M003245 ORTHO04x5M005668 1.4e-211 738.4 485 78.1
OsR498G0204455800.01 Oryza sativa ssp. indica HOM04x5M003245 ORTHO04x5M005668 8.3e-209 729.2 483 78.5
LOC_Os02g44104 Oryza sativa ssp. japonica HOM04x5M003245 ORTHO04x5M005668 5.4e-208 726.5 484 78.1
OB02G33900 Oryza brachyantha HOM04x5M003245 ORTHO04x5M005668 1.0e-206 722.2 485 78.6
Sobic.004G294700 Sorghum bicolor HOM04x5M003245 ORTHO04x5M005668 9.8e-202 705.7 395 91.4
PH01000995G0530 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 4.0e-195 683.7 392 87.8
PH01003305G0030 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 3.1e-187 657.5 598 61.5
Zjn_sc00007.1.g10190.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M003245 ORTHO04x5M005668 3.8e-169 597.4 436 73.2
Zm00008a022532 Zea mays PH207 HOM04x5M003245 ORTHO04x5M005668 1.5e-162 575.5 281 99.6
p5.00_sc00002_p0220 Elaeis guineensis HOM04x5M003245 ORTHO04x5M005668 2.0e-162 575.1 474 61.2
Aco012817 Ananas comosus HOM04x5M003245 ORTHO04x5M005668 2.1e-159 565.1 474 61.8
Ma04_g20220 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 1.0e-150 536.2 483 58.2
Pgl_GLEAN_10009580 Cenchrus americanus HOM04x5M003245 ORTHO04x5M005668 5.1e-150 533.9 280 92.5
Ma05_g13320 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 2.5e-149 531.6 472 57.2
Ma04_g36850 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 2.0e-146 521.9 476 57.8
Spipo11G0034400 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 8.8e-142 506.5 484 55.4
Spipo17G0022500 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 6.7e-134 480.3 474 53.2
CALSI_Maker00016894 Calamus simplicifolius HOM04x5M003245 ORTHO04x5M005668 3.2e-128 461.5 329 66.0
PEQU_14480 Phalaenopsis equestris HOM04x5M003245 ORTHO04x5M005668 8.8e-126 453.4 450 53.8
ASH_gene6044 Apostasia shenzhenica HOM04x5M003245 ORTHO04x5M005668 1.7e-121 439.1 484 49.4
Potri.003G107900 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 2.7e-119 431.8 433 52.9
PAB00017842 Picea abies HOM04x5M003245 ORTHO04x5M005668 5.2e-118 427.6 444 51.4
Zosma85g00440 Zostera marina HOM04x5M003245 ORTHO04x5M005668 6.8e-118 427.2 437 50.1
Potri.001G125800 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 8.8e-118 426.8 435 52.9
GSVIVG01014046001 Vitis vinifera HOM04x5M003245 ORTHO04x5M005668 1.5e-117 426.0 427 52.7
Potri.002G143200 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 1.7e-116 422.5 463 50.5
Zosma85g00410 Zostera marina HOM04x5M003245 ORTHO04x5M005668 6.1e-111 404.1 468 44.9
Solyc01g095800.2 Solanum lycopersicum HOM04x5M003245 ORTHO04x5M005668 1.8e-110 402.5 424 50.9
Solyc03g093310.2 Solanum lycopersicum HOM04x5M003245 ORTHO04x5M005668 1.5e-109 399.4 433 50.6
ATR0317G122 Amborella trichopoda HOM04x5M003245 ORTHO04x5M005668 3.4e-109 398.3 489 46.2
AT5G51380 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 4.1e-107 391.3 478 46.0
AT5G51370 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 4.0e-102 374.8 441 46.9
GSVIVG01018169001 Vitis vinifera HOM04x5M003245 ORTHO04x5M005668 1.8e-99 365.9 287 61.3
Potri.014G059100 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 2.4e-99 365.5 270 64.4
gene2101 Selaginella moellendorffii HOM04x5M003245 ORTHO04x5M005668 3.5e-98 361.7 489 44.2
gene5137 Selaginella moellendorffii HOM04x5M003245 ORTHO04x5M005668 3.5e-98 361.7 490 44.1
Pp3c14_8820 Physcomitrium patens HOM04x5M003245 ORTHO04x5M005668 9.2e-91 337.0 527 38.7
Pp3c10_7500 Physcomitrium patens HOM04x5M003245 ORTHO04x5M005668 4.7e-87 324.7 528 37.9
Spipo1G0082300 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 2.0e-85 319.3 350 48.9
AT5G07670 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 2.6e-85 318.9 478 42.3
PAB00008675 Picea abies HOM04x5M003245 ORTHO04x5M005668 9.8e-85 317.0 465 41.3
Mapoly0089s0010 Marchantia polymorpha HOM04x5M003245 ORTHO04x5M005668 5.8e-77 291.2 597 34.7
Sobic.001G303825 Sorghum bicolor HOM04x5M003245 ORTHO04x5M005668 3.2e-75 285.4 177 86.4
p5.00_sc00023_p0055 Elaeis guineensis HOM04x5M003245 ORTHO04x5M005668 5.6e-72 274.6 289 52.9
Sspon.01G0000930-2C Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 1.5e-69 266.5 154 91.6
gene29505 Selaginella moellendorffii HOM04x5M007241 ORTHO04x5M009064 8.5e-12 74.7 415 27.0
gene31603 Selaginella moellendorffii HOM04x5M007241 ORTHO04x5M009064 1.9e-11 73.6 415 26.7
Seita.3G037200 Setaria italica HOM04x5M000398 ORTHO04x5M000623 1.8e-09 67.0 408 26.7
Seita.7G329600 Setaria italica HOM04x5M002561 ORTHO04x5M002801 3.0e-09 66.2 277 24.5
gene9569 Selaginella moellendorffii HOM04x5M005129 ORTHO04x5M007169 3.0e-09 66.2 464 23.5
Sspon.07G0012970-3C Saccharum spontaneum HOM04x5M000398 ORTHO04x5M000623 8.8e-09 64.7 428 26.9
GSVIVG01017859001 Vitis vinifera HOM04x5M005490 ORTHO04x5M004478 8.8e-09 64.7 167 32.3
gene32676 Selaginella moellendorffii HOM04x5M005129 ORTHO04x5M007169 1.2e-08 64.3 464 23.5
Spipo25G0007400 Spirodela polyrhiza HOM04x5M001710 ORTHO04x5M001818 1.2e-08 64.3 370 24.6
PH01000035G0470 Phyllostachys edulis HOM04x5M000398 ORTHO04x5M000623 4.4e-08 62.4 433 26.8
TraesCS5B02G097800 Triticum aestivum HOM04x5M003741 ORTHO04x5M004639 4.4e-08 62.4 289 25.6
TRITD5Bv1G046450 Triticum turgidum HOM04x5M003741 ORTHO04x5M004639 4.4e-08 62.4 289 25.6
GSVIVG01030257001 Vitis vinifera HOM04x5M002561 ORTHO04x5M002801 4.4e-08 62.4 282 20.6
Ma09_g11000 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 7.5e-08 61.6 383 27.2
gene10300 Selaginella moellendorffii HOM04x5M001710 ORTHO04x5M001818 7.5e-08 61.6 415 25.8
gene29354 Selaginella moellendorffii HOM04x5M001710 ORTHO04x5M001818 7.5e-08 61.6 415 25.8
Zm00008a014757 Zea mays PH207 HOM04x5M002561 ORTHO04x5M002801 9.7e-08 61.2 190 24.7
Solyc06g054440.2 Solanum lycopersicum HOM04x5M005490 ORTHO04x5M004478 1.3e-07 60.8 154 31.2
Potri.014G023500 Populus trichocarpa HOM04x5M001710 ORTHO04x5M001818 1.7e-07 60.5 419 23.2
Sspon.04G0024290-1B Saccharum spontaneum HOM04x5M001801 ORTHO04x5M000731 2.2e-07 60.1 380 23.2
HORVU5Hr1G024060 Hordeum vulgare HOM04x5M003741 ORTHO04x5M004639 2.8e-07 59.7 174 29.3
LOC_Os05g05800 Oryza sativa ssp. japonica HOM04x5M000398 ORTHO04x5M000623 2.8e-07 59.7 431 26.5
CALSI_Maker00010146 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 3.7e-07 59.3 419 24.8
CALSI_Maker00028890 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 3.7e-07 59.3 200 25.0
CALSI_Maker00037456 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 3.7e-07 59.3 419 24.8
Misin15G032600 Miscanthus sinensis HOM04x5M002561 ORTHO04x5M002801 3.7e-07 59.3 276 22.8
PH01001592G0190 Phyllostachys edulis HOM04x5M000398 ORTHO04x5M000623 3.7e-07 59.3 396 26.5
Spipo27G0021100 Spirodela polyrhiza HOM04x5M001828 ORTHO04x5M001806 4.8e-07 58.9 163 30.1
Sspon.07G0016810-1A Saccharum spontaneum HOM04x5M002561 ORTHO04x5M002801 4.8e-07 58.9 281 22.1
Sspon.07G0016810-2C Saccharum spontaneum HOM04x5M002561 ORTHO04x5M002801 4.8e-07 58.9 276 22.8
GSVIVG01024623001 Vitis vinifera HOM04x5M002561 ORTHO04x5M002801 4.8e-07 58.9 136 25.7
LP026565 Lolium perenne HOM04x5M006240 ORTHO04x5M008259 6.3e-07 58.5 125 29.6
Sspon.07G0012970-1A Saccharum spontaneum HOM04x5M000398 ORTHO04x5M000623 6.3e-07 58.5 357 26.1
Misin16G034100 Miscanthus sinensis HOM04x5M000398 ORTHO04x5M000623 8.2e-07 58.2 390 25.9
Sobic.009G045300 Sorghum bicolor HOM04x5M000398 ORTHO04x5M000623 8.2e-07 58.2 400 25.8
gene429 Selaginella moellendorffii HOM04x5M002561 ORTHO04x5M002801 8.2e-07 58.2 234 25.2
Sspon.07G0012970-2B Saccharum spontaneum HOM04x5M000398 ORTHO04x5M000623 1.1e-06 57.8 438 26.5
evm.TU.AsparagusV1_05.3229.V1.1 Asparagus officinalis HOM04x5M001710 ORTHO04x5M001818 2.4e-06 56.6 199 29.6
CALSI_Maker00022218 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 3.1e-06 56.2 185 26.5
PH01001549G0530 Phyllostachys edulis HOM04x5M003741 ORTHO04x5M004639 3.1e-06 56.2 426 24.6
TraesCS1B02G008900 Triticum aestivum HOM04x5M001010 ORTHO04x5M000824 3.1e-06 56.2 310 24.8
Zosma41g00420 Zostera marina HOM04x5M005490 ORTHO04x5M004478 3.1e-06 56.2 325 28.3
ATR0490G002 Amborella trichopoda HOM04x5M001710 ORTHO04x5M001818 4.1e-06 55.8 221 29.9
p5.00_sc00109_p0004 Elaeis guineensis HOM04x5M001710 ORTHO04x5M001818 4.1e-06 55.8 433 24.2
Bradi2g35720 Brachypodium distachyon HOM04x5M000398 ORTHO04x5M000623 5.3e-06 55.5 422 26.3
p5.00_sc00004_p0111 Elaeis guineensis HOM04x5M001710 ORTHO04x5M001818 5.3e-06 55.5 214 26.6
Spipo6G0036000 Spirodela polyrhiza HOM04x5M005490 ORTHO04x5M004478 5.3e-06 55.5 164 26.8
Aco010022 Ananas comosus HOM04x5M005129 ORTHO04x5M007169 7.0e-06 55.1 429 25.4
Spipo23G0043100 Spirodela polyrhiza HOM04x5M002561 ORTHO04x5M002801 9.1e-06 54.7 167 24.0

Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (5 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (4 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (2 genes)
Picea abies (2 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (9 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (7 genes)
Triticum aestivum (5 genes)
Triticum turgidum (3 genes)
Vitis vinifera (5 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (2 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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