Interactive Phylogenetics Module

Gene Id
Zm00007a00015624

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d048238 Zea mays B73 HOM04x5M004164 ORTHO04x5M004913 2.0e-67 258.5 199 100.0
Zm00007a00015624 Zea mays B104 HOM04x5M004164 ORTHO04x5M004913 2.0e-67 258.5 199 100.0
Zm00008a035969 Zea mays PH207 HOM04x5M004164 ORTHO04x5M004913 7.7e-67 256.5 198 100.0
Sspon.01G0004760-1P Saccharum spontaneum HOM04x5M004164 ORTHO04x5M004913 1.6e-51 205.7 101 91.1
Sspon.01G0004760-1A Saccharum spontaneum HOM04x5M004164 ORTHO04x5M004913 1.6e-51 205.7 101 91.1
Sspon.01G0004760-2C Saccharum spontaneum HOM04x5M004164 ORTHO04x5M004913 1.6e-51 205.7 101 91.1
Sspon.01G0004760-3D Saccharum spontaneum HOM04x5M004164 ORTHO04x5M004913 1.6e-51 205.7 101 91.1
Misin02G451000 Miscanthus sinensis HOM04x5M004164 ORTHO04x5M004913 5.9e-51 203.8 101 91.1
Sobic.001G477900 Sorghum bicolor HOM04x5M004164 ORTHO04x5M004913 1.3e-50 202.6 101 89.1
Misin01G451400 Miscanthus sinensis HOM04x5M004164 ORTHO04x5M004913 1.7e-50 202.2 101 90.1
Pgl_GLEAN_10008734 Cenchrus americanus HOM04x5M004164 ORTHO04x5M004913 1.9e-49 198.7 101 85.1
Seita.9G513500 Setaria italica HOM04x5M004164 ORTHO04x5M004913 9.5e-49 196.4 99 86.9
Bradi1g72100 Brachypodium distachyon HOM04x5M004164 ORTHO04x5M004913 4.7e-48 194.1 103 85.4
TraesCS4D02G301400 Triticum aestivum HOM04x5M004164 ORTHO04x5M004913 6.8e-47 190.3 99 83.8
TraesCS4A02G002200 Triticum aestivum HOM04x5M004164 ORTHO04x5M004913 6.8e-47 190.3 197 75.6
TraesCS4B02G302900 Triticum aestivum HOM04x5M004164 ORTHO04x5M004913 6.8e-47 190.3 99 83.8
TRITD4Bv1G175160 Triticum turgidum HOM04x5M004164 ORTHO04x5M004913 6.8e-47 190.3 99 83.8
Zm00001d027967 Zea mays B73 HOM04x5M004164 ORTHO04x5M004913 8.9e-47 189.9 101 82.2
Zm00007a00023826 Zea mays B104 HOM04x5M004164 ORTHO04x5M004913 8.9e-47 189.9 101 82.2
Zm00008a000568 Zea mays PH207 HOM04x5M004164 ORTHO04x5M004913 8.9e-47 189.9 101 82.2
Oropetium_20150105_00317 Oropetium thomaeum HOM04x5M004164 ORTHO04x5M004913 2.6e-46 188.3 101 82.2
LP029393 Lolium perenne HOM04x5M004164 ORTHO04x5M004913 9.8e-46 186.4 98 81.6
PH01000038G1650 Phyllostachys edulis HOM04x5M004164 ORTHO04x5M004913 2.2e-45 185.3 99 81.8
OB03G16460 Oryza brachyantha HOM04x5M004164 ORTHO04x5M004913 2.9e-45 184.9 98 83.7
LOC_Os03g08810 Oryza sativa ssp. japonica HOM04x5M004164 ORTHO04x5M004913 1.4e-44 182.6 99 81.8
OsR498G0305352100.01 Oryza sativa ssp. indica HOM04x5M004164 ORTHO04x5M004913 1.4e-44 182.6 99 81.8
HORVU4Hr1G078020 Hordeum vulgare HOM04x5M004164 ORTHO04x5M004913 2.4e-44 181.8 198 73.7
PH01000115G1360 Phyllostachys edulis HOM04x5M004164 ORTHO04x5M004913 7.0e-44 180.3 99 79.8
Aco004039 Ananas comosus HOM04x5M004164 ORTHO04x5M004913 1.1e-39 166.4 105 71.4
p5.00_sc00031_p0081 Elaeis guineensis HOM04x5M004164 ORTHO04x5M004913 1.5e-38 162.5 104 68.3
evm.TU.AsparagusV1_03.1691.V1.1 Asparagus officinalis HOM04x5M004164 ORTHO04x5M004913 1.7e-37 159.1 106 67.0
Ma08_g18550 Musa acuminata HOM04x5M004164 ORTHO04x5M004913 1.1e-36 156.4 96 68.8
Spipo30G0001600 Spirodela polyrhiza HOM04x5M004164 ORTHO04x5M004913 5.4e-36 154.1 96 67.7
evm.TU.AsparagusV1_07.3532.V1.1 Asparagus officinalis HOM04x5M004164 ORTHO04x5M004913 1.2e-35 152.9 97 66.0
Potri.005G033100 Populus trichocarpa HOM04x5M004164 ORTHO04x5M004913 1.6e-35 152.5 97 68.0
Ma05_g26110 Musa acuminata HOM04x5M004164 ORTHO04x5M004913 2.7e-35 151.8 97 69.1
CALSI_Maker00023298 Calamus simplicifolius HOM04x5M004164 ORTHO04x5M004913 3.5e-35 151.4 91 69.2
ASH_gene3381 Apostasia shenzhenica HOM04x5M004164 ORTHO04x5M004913 6.0e-35 150.6 96 65.6
p5.00_sc00001_p0929 Elaeis guineensis HOM04x5M004164 ORTHO04x5M004913 3.0e-34 148.3 96 66.7
Ma06_g04930 Musa acuminata HOM04x5M004164 ORTHO04x5M004913 3.0e-34 148.3 96 67.7
ATR1127G116 Amborella trichopoda HOM04x5M004164 ORTHO04x5M004913 6.6e-34 147.1 96 63.5
CALSI_Maker00036135 Calamus simplicifolius HOM04x5M004164 ORTHO04x5M004913 1.1e-33 146.4 101 67.3
CALSI_Maker00017113 Calamus simplicifolius HOM04x5M004164 ORTHO04x5M004913 1.1e-33 146.4 96 64.6
Potri.013G022500 Populus trichocarpa HOM04x5M004164 ORTHO04x5M004913 1.5e-33 146.0 97 67.0
AT5G62440 Arabidopsis thaliana HOM04x5M004164 ORTHO04x5M004913 5.6e-33 144.1 96 63.5
Zosma20g01140 Zostera marina HOM04x5M004164 ORTHO04x5M004913 7.3e-33 143.7 97 64.9
Zjn_sc00993.1.g00010.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M004164 ORTHO04x5M004913 3.6e-32 141.4 70 85.7
Solyc06g069770.2 Solanum lycopersicum HOM04x5M004164 ORTHO04x5M004913 6.2e-32 140.6 97 66.0
PEQU_12315 Phalaenopsis equestris HOM04x5M004164 ORTHO04x5M004913 1.8e-31 139.0 99 63.6
GSVIVG01007999001 Vitis vinifera HOM04x5M004164 ORTHO04x5M004913 2.0e-30 135.6 90 66.7
Solyc03g116020.2 Solanum lycopersicum HOM04x5M004164 ORTHO04x5M004913 2.2e-29 132.1 96 62.5
Zosma10g00220 Zostera marina HOM04x5M004164 ORTHO04x5M004913 4.1e-28 127.9 96 60.4
Mapoly0139s0003 Marchantia polymorpha HOM04x5M004164 ORTHO04x5M004913 1.6e-27 125.9 95 53.7
Potri.013G021800 Populus trichocarpa HOM04x5M004164 ORTHO04x5M004913 1.0e-26 123.2 97 54.6
gene19167 Selaginella moellendorffii HOM04x5M004164 ORTHO04x5M004913 3.0e-26 121.7 101 53.5
gene16535 Selaginella moellendorffii HOM04x5M004164 ORTHO04x5M004913 3.0e-26 121.7 101 53.5
Pp3c23_7150 Physcomitrium patens HOM04x5M004164 ORTHO04x5M004913 8.7e-26 120.2 101 52.5
Pp3c20_9520 Physcomitrium patens HOM04x5M004164 ORTHO04x5M004913 1.2e-24 116.3 101 48.5
PAB00023376 Picea abies HOM04x5M004164 ORTHO04x5M004913 3.8e-21 104.8 77 58.4
PAB00054859 Picea abies HOM04x5M004164 ORTHO04x5M004913 1.2e-19 99.8 68 63.2
Pp3c10_17790 Physcomitrium patens HOM04x5M004164 ORTHO04x5M004913 1.0e-18 96.7 95 45.3
MCO11G674 Micromonas commoda HOM04x5M004164 ORTHO04x5M004913 6.6e-18 94.0 90 46.7
Cre02.g085950 Chlamydomonas reinhardtii HOM04x5M004164 ORTHO04x5M004913 1.1e-09 66.6 91 39.6
ATR1102G051 Amborella trichopoda HOM04x5M002429 ORTHO04x5M002480 8.1e-08 60.5 86 39.5
Pp3c24_12900 Physcomitrium patens HOM04x5M004164 ORTHO04x5M004913 2.4e-07 58.9 65 41.5
gene32181 Selaginella moellendorffii HOM04x5M002429 ORTHO04x5M002480 2.0e-06 55.8 62 40.3
Aco015559 Ananas comosus HOM04x5M001688 ORTHO04x5M005344 3.4e-06 55.1 87 40.2
Mapoly0006s0043 Marchantia polymorpha HOM04x5M000643 ORTHO04x5M005344 4.5e-06 54.7 60 41.7
TraesCS6B02G094400 Triticum aestivum HOM04x5M001688 ORTHO04x5M002815 4.5e-06 54.7 61 37.7
Misin07G504800 Miscanthus sinensis HOM04x5M002429 ORTHO04x5M002480 5.8e-06 54.3 65 44.6
Misin08G298700 Miscanthus sinensis HOM04x5M002429 ORTHO04x5M002480 5.8e-06 54.3 65 44.6
Sobic.002G144275 Sorghum bicolor HOM04x5M002429 ORTHO04x5M002480 5.8e-06 54.3 58 41.4
Sobic.004G309400 Sorghum bicolor HOM04x5M002429 ORTHO04x5M002480 5.8e-06 54.3 65 44.6
Sspon.04G0002720-2B Saccharum spontaneum HOM04x5M002429 ORTHO04x5M002480 5.8e-06 54.3 65 44.6
Sspon.04G0002720-1A Saccharum spontaneum HOM04x5M002429 ORTHO04x5M002480 5.8e-06 54.3 65 44.6
Sspon.04G0002720-4D Saccharum spontaneum HOM04x5M002429 ORTHO04x5M002480 5.8e-06 54.3 65 44.6
Sspon.04G0002720-3C Saccharum spontaneum HOM04x5M002429 ORTHO04x5M002480 5.8e-06 54.3 65 44.6
Zosma1g02080 Zostera marina HOM04x5M001688 ORTHO04x5M005344 5.8e-06 54.3 47 51.1
Misin04G136400 Miscanthus sinensis HOM04x5M002429 ORTHO04x5M002480 7.6e-06 53.9 58 36.2
Potri.001G111300 Populus trichocarpa HOM04x5M001688 ORTHO04x5M005344 7.6e-06 53.9 79 35.4
Pgl_GLEAN_10002524 Cenchrus americanus HOM04x5M002429 ORTHO04x5M002480 9.9e-06 53.5 65 43.1
HORVU0Hr1G017250 Hordeum vulgare HOM04x5M002429 ORTHO04x5M002480 9.9e-06 53.5 65 41.5
HORVU6Hr1G080760 Hordeum vulgare HOM04x5M002429 ORTHO04x5M002480 9.9e-06 53.5 65 41.5
LP023451 Lolium perenne HOM04x5M002429 ORTHO04x5M002480 9.9e-06 53.5 65 41.5
TraesCS6A02G333800 Triticum aestivum HOM04x5M002429 ORTHO04x5M002480 9.9e-06 53.5 65 41.5
TraesCS6B02G364500 Triticum aestivum HOM04x5M002429 ORTHO04x5M002480 9.9e-06 53.5 65 41.5
TraesCS6D02G313000 Triticum aestivum HOM04x5M002429 ORTHO04x5M002480 9.9e-06 53.5 65 41.5
TRITD6Av1G199650 Triticum turgidum HOM04x5M002429 ORTHO04x5M002480 9.9e-06 53.5 65 41.5
TRITD6Bv1G194970 Triticum turgidum HOM04x5M002429 ORTHO04x5M002480 9.9e-06 53.5 65 41.5

Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (3 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (3 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (4 genes)
Picea abies (2 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (8 genes)
Selaginella moellendorffii (3 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (7 genes)
Triticum turgidum (3 genes)
Vitis vinifera (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (2 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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