Interactive Phylogenetics Module

Gene Id
Zm00007a00014538

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00007a00014538 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1268.4 677 100.0
Zm00008a004117 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1249.6 677 99.0
Zm00001d032632 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1218.8 651 100.0
Misin01G188300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1218.0 674 92.7
Sspon.01G0020010-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1212.6 674 92.4
Misin02G189500 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1211.4 674 92.4
Sobic.001G211500 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1210.7 695 94.2
Sspon.01G0019980-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1201.4 617 98.2
Seita.9G212100 Setaria italica HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1191.0 617 96.6
Pgl_GLEAN_10028670 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1169.8 604 97.2
Sspon.01G0020010-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1165.2 649 92.1
OB10G21140 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1151.0 617 92.9
LOC_Os10g34750 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1149.0 617 92.7
OsR498G1018951400.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1149.0 617 92.7
Sspon.01G0020010-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1145.6 649 91.1
Bradi3g29530 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1145.2 614 92.7
TraesCS1D02G172600 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1142.1 617 91.6
TraesCS1B02G184700 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1141.7 617 91.4
TraesCS1A02G172100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1140.9 617 91.6
HORVU1Hr1G044350 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1136.7 617 91.2
LP020896 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1127.1 617 90.3
TRITD1Bv1G107980 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1094.0 591 91.5
Aco007673 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1087.0 617 87.5
Ma04_g22700 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 1.9e-307 1057.7 618 84.6
TRITD1Av1G110770 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 4.1e-302 1040.0 565 91.3
Spipo16G0032600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 1.7e-300 1034.6 617 81.8
ASH_gene2944 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 3.8e-292 1006.9 623 80.6
PEQU_15249 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 1.7e-287 991.5 618 79.4
Zosma34g01290 Zostera marina HOM04x5M001747 ORTHO04x5M002018 1.8e-286 988.0 617 78.3
CALSI_Maker00032487 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 1.5e-275 951.8 617 77.1
PH01001204G0070 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 2.1e-274 948.0 565 85.3
GSVIVG01031470001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 2.3e-273 944.5 616 75.5
Solyc11g066370.1 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 5.7e-272 939.9 616 73.5
ATR0329G039 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 2.8e-271 937.6 616 74.4
Potri.009G005900 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 1.1e-270 935.6 615 73.3
AT1G08130 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 8.8e-265 916.0 610 72.0
Mapoly0033s0129 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 2.4e-254 881.3 616 69.2
gene13434 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 1.0e-252 875.9 612 69.9
gene26512 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 3.9e-252 874.0 612 69.6
Pp3c13_20200 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 8.6e-252 872.8 616 68.3
Pp3c13_20209 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 8.6e-252 872.8 616 68.3
evm.TU.AsparagusV1_04.2270.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 6.2e-234 813.5 487 83.2
Sspon.01G0019980-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 2.8e-226 788.1 477 87.6
AT1G49250 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 8.1e-218 760.0 580 64.3
MCO11G338 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 8.7e-196 686.8 608 58.2
Oropetium_20150105_11084 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 3.1e-193 678.3 658 58.7
Cre07.g325716 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 6.1e-181 637.5 622 52.7
PH01000186G0040 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 2.9e-151 538.9 299 91.6
Mapoly0069s0045 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 2.8e-141 505.8 637 42.4
gene13766 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 8.9e-140 500.7 622 42.4
OB01G36030 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 1.5e-134 483.4 627 39.2
TraesCS3D02G265000 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 2.5e-134 482.6 624 39.4
TraesCS3A02G264800 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 3.3e-134 482.3 627 39.1
TRITD3Av1G176280 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 3.3e-134 482.3 627 39.1
HORVU3Hr1G063470 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 1.6e-133 479.9 624 39.3
OsR498G0101784200.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 1.6e-133 479.9 624 39.4
Misin06G224100 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 1.1e-132 477.2 624 38.8
LP029527 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 1.8e-132 476.5 624 39.1
TRITD3Bv1G156800 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 2.3e-132 476.1 624 38.9
Bradi2g46780 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 3.1e-132 475.7 624 39.4
TraesCS3B02G298100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 3.1e-132 475.7 622 38.9
Seita.5G274300 Setaria italica HOM04x5M001747 ORTHO04x5M002018 2.0e-131 473.0 623 38.8
ATR0691G097 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 9.8e-131 470.7 636 39.8
GSVIVG01030942001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 1.3e-130 470.3 627 39.1
AT1G66730 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 2.9e-130 469.2 629 39.4
Ma04_g00670 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 1.9e-129 466.5 628 38.7
CALSI_Maker00050199 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 2.4e-129 466.1 643 38.7
ASH_gene7517 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 3.2e-129 465.7 632 39.1
Solyc02g091120.2 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 3.2e-129 465.7 657 37.1
Sspon.01G0019980-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 9.2e-129 464.2 230 98.7
LOC_Os01g49180 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 6.0e-120 434.9 689 35.1
PEQU_31644 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 1.8e-116 423.3 627 36.5
gene13033 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 2.4e-113 412.9 513 42.5
Sobic.003G260400 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 5.4e-113 411.8 540 38.9
Pgl_GLEAN_10032519 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 1.5e-110 403.7 624 35.4
Zjn_sc00017.1.g06380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 1.3e-98 364.0 591 42.6
Oropetium_20150105_11565 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 4.9e-98 362.1 627 32.5
Potri.004G094300 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 2.7e-96 356.3 460 39.1
MCO09G458 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 7.9e-96 354.8 603 37.6
PH01000704G0390 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 1.1e-81 307.8 453 36.2
Sspon.03G0031770-1B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 3.2e-81 306.2 404 38.9
Cre06.g278177 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 2.3e-63 246.9 1014 23.1
p5.00_sc00008_p0159 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 3.3e-62 243.0 344 37.5
Aco000044 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 1.1e-60 238.0 424 33.3
Zm00001d043835 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 3.8e-58 229.6 391 33.2
Zm00008a014124 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 1.4e-55 221.1 249 41.0
Sspon.03G0031770-2C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.1e-49 201.4 393 31.3
evm.TU.AsparagusV1_09.814.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 1.6e-48 197.6 427 28.6
PAB00005808 Picea abies HOM04x5M001747 ORTHO04x5M002018 2.1e-48 197.2 187 46.0
ATR0749G104 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 1.2e-46 191.4 109 82.6
p5.00_sc00008_p0160 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 5.7e-46 189.1 190 46.3
ATR0749G050 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 3.7e-45 186.4 128 71.9
Spipo19G0024700 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 1.8e-44 184.1 243 39.9
PAB00000364 Picea abies HOM04x5M001747 ORTHO04x5M002018 1.2e-43 181.4 116 73.3
PAB00001978 Picea abies HOM04x5M001747 ORTHO04x5M002018 4.7e-40 169.5 110 74.5
Zm00007a00029335 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 8.0e-40 168.7 276 34.1
PAB00036263 Picea abies HOM04x5M001747 ORTHO04x5M002018 7.7e-35 152.1 90 76.7
Spipo19G0024800 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 3.6e-32 143.3 228 36.4
gene15054 Selaginella moellendorffii HOM04x5M004601 ORTHO04x5M005443 8.0e-32 142.1 579 24.4
gene25806 Selaginella moellendorffii HOM04x5M004601 ORTHO04x5M005443 4.0e-31 139.8 579 24.2
Pgl_GLEAN_10020369 Cenchrus americanus HOM04x5M004601 ORTHO04x5M005443 1.2e-30 138.3 369 28.5
TraesCS2A02G431800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 2.0e-30 137.5 587 24.4
TraesCS2D02G429800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 3.4e-30 136.7 589 24.6
PAB00006638 Picea abies HOM04x5M001747 ORTHO04x5M002018 5.7e-30 136.0 176 35.8
TraesCS2B02G453300 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 6.3e-29 132.5 378 28.3
Bradi5g20927 Brachypodium distachyon HOM04x5M004601 ORTHO04x5M005443 8.3e-29 132.1 380 27.6
TRITD2Av1G250540 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 1.4e-28 131.3 380 28.7
Ma01_g18780 Musa acuminata HOM04x5M004601 ORTHO04x5M005443 3.1e-28 130.2 380 26.8
TRITD2Bv1G212650 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 4.1e-28 129.8 589 24.1
Potri.018G141900 Populus trichocarpa HOM04x5M004601 ORTHO04x5M005443 9.2e-28 128.6 379 26.9
Sobic.006G207300 Sorghum bicolor HOM04x5M004601 ORTHO04x5M005443 1.2e-27 128.3 582 22.5
Spipo28G0023000 Spirodela polyrhiza HOM04x5M004601 ORTHO04x5M005443 1.2e-27 128.3 379 26.9
Zjn_sc00023.1.g02440.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004601 ORTHO04x5M005443 1.6e-27 127.9 381 27.6
PEQU_25681 Phalaenopsis equestris HOM04x5M004601 ORTHO04x5M005443 2.0e-27 127.5 378 27.8
AT5G57160 Arabidopsis thaliana HOM04x5M004601 ORTHO04x5M005443 2.7e-27 127.1 381 27.6
ATR0626G236 Amborella trichopoda HOM04x5M004601 ORTHO04x5M005443 2.7e-27 127.1 388 27.6
GSVIVG01029314001 Vitis vinifera HOM04x5M004601 ORTHO04x5M005443 7.8e-27 125.6 381 26.2
Zjn_sc00011.1.g00310.1.cf.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 7.8e-27 125.6 140 42.9
Seita.7G229000 Setaria italica HOM04x5M004601 ORTHO04x5M005443 1.3e-26 124.8 407 25.8
LP005256 Lolium perenne HOM04x5M004601 ORTHO04x5M005443 1.7e-26 124.4 377 28.9
PH01000224G0720 Phyllostachys edulis HOM04x5M004601 ORTHO04x5M005443 2.3e-26 124.0 386 27.5
Solyc07g017990.2 Solanum lycopersicum HOM04x5M004601 ORTHO04x5M005443 1.5e-25 121.3 345 26.4
Zm00008a014123 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 1.9e-25 120.9 155 38.7
Potri.004G094200 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 1.2e-24 118.2 162 38.3
Sspon.03G0009130-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.2e-24 118.2 137 41.6
Mapoly0001s0137 Marchantia polymorpha HOM04x5M004601 ORTHO04x5M005443 1.6e-24 117.9 384 26.0
Zm00001d002390 Zea mays B73 HOM04x5M004601 ORTHO04x5M005443 2.1e-24 117.5 375 26.1
evm.TU.AsparagusV1_01.2163.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 2.8e-24 117.1 108 48.1
evm.TU.AsparagusV1_08.2229.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 1.4e-23 114.8 102 48.0
Zm00007a00034356 Zea mays B104 HOM04x5M004601 ORTHO04x5M005443 1.8e-23 114.4 362 27.3
CALSI_Maker00020618 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 5.8e-22 109.4 140 41.4
OsR498G0409240600.01 Oryza sativa ssp. indica HOM04x5M004601 ORTHO04x5M005443 1.3e-21 108.2 452 24.6
Oropetium_20150105_01621 Oropetium thomaeum HOM04x5M004601 ORTHO04x5M005443 1.3e-18 98.2 378 24.3
OB04G31400 Oryza brachyantha HOM04x5M004601 ORTHO04x5M005443 3.0e-18 97.1 197 33.5
Zm00008a014122 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 8.6e-18 95.5 106 42.5
PAB00058901 Picea abies HOM04x5M001747 ORTHO04x5M002018 1.5e-17 94.7 52 82.7
Cre10.g433550 Chlamydomonas reinhardtii HOM04x5M004601 ORTHO04x5M005443 1.9e-17 94.4 420 23.6
Zm00008a006350 Zea mays PH207 HOM04x5M004601 ORTHO04x5M005443 1.1e-15 88.6 362 24.3
evm.TU.AsparagusV1_04.1989.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 2.3e-15 87.4 69 53.6
ATR0749G026 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 1.2e-14 85.1 55 72.7
Misin05G212300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 8.3e-13 79.0 76 42.1
Zm00007a00052093 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 1.4e-12 78.2 76 42.1
CALSI_Maker00023721 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 7.0e-12 75.9 67 50.7
CALSI_Maker00003384 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 7.0e-12 75.9 74 45.9
Misin05G212200 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 3.5e-11 73.6 193 27.5
Zm00007a00029334 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 1.0e-10 72.0 76 42.1
Sspon.03G0031770-3D Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.3e-10 71.6 237 25.7
CALSI_Maker00001347 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 8.6e-10 68.9 68 45.6
Spipo0G0169600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M013120 5.6e-09 66.2 93 37.6

Amborella trichopoda (6 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (5 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (6 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (3 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (2 genes)
Picea abies (6 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (6 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (5 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (3 genes)
Zea mays B73 (3 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (5 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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