Interactive Phylogenetics Module

Gene Id
Zm00007a00012939

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00007a00012939 Zea mays B104 HOM04x5M004993 ORTHO04x5M007440 1.2e-114 415.2 212 100.0
Zm00001d019950 Zea mays B73 HOM04x5M004993 ORTHO04x5M007440 1.3e-102 375.2 215 91.2
Zm00008a027627 Zea mays PH207 HOM04x5M004993 ORTHO04x5M007440 1.3e-102 375.2 215 91.2
Sobic.002G152900 Sorghum bicolor HOM04x5M004993 ORTHO04x5M007440 6.9e-99 362.8 215 87.4
Seita.2G163500 Setaria italica HOM04x5M004993 ORTHO04x5M007440 1.5e-98 361.7 215 86.0
MisinT396000 Miscanthus sinensis HOM04x5M004993 ORTHO04x5M007440 2.6e-98 360.9 215 87.0
Pgl_GLEAN_10009201 Cenchrus americanus HOM04x5M004993 ORTHO04x5M007440 5.8e-98 359.8 215 85.1
Misin03G039400 Miscanthus sinensis HOM04x5M004993 ORTHO04x5M007440 1.1e-96 355.5 215 86.0
PH01004131G0010 Phyllostachys edulis HOM04x5M004993 ORTHO04x5M007440 5.5e-96 353.2 214 85.5
LOC_Os09g10770 Oryza sativa ssp. japonica HOM04x5M004993 ORTHO04x5M007440 1.6e-95 351.7 214 83.6
OsR498G0916907100.01 Oryza sativa ssp. indica HOM04x5M004993 ORTHO04x5M007440 1.6e-95 351.7 214 83.6
Bradi4g27057 Brachypodium distachyon HOM04x5M004993 ORTHO04x5M007440 3.5e-95 350.5 215 84.2
TraesCS5D02G178400 Triticum aestivum HOM04x5M004993 ORTHO04x5M007440 3.0e-94 347.4 215 81.9
HORVU5Hr1G053310 Hordeum vulgare HOM04x5M004993 ORTHO04x5M007440 3.9e-94 347.1 215 81.9
TraesCS5A02G173900 Triticum aestivum HOM04x5M004993 ORTHO04x5M007440 3.9e-94 347.1 215 81.9
TRITD5Av1G127580 Triticum turgidum HOM04x5M004993 ORTHO04x5M007440 3.9e-94 347.1 215 81.9
OB09G12250 Oryza brachyantha HOM04x5M004993 ORTHO04x5M007440 8.7e-94 345.9 214 82.7
LP024950 Lolium perenne HOM04x5M004993 ORTHO04x5M007440 1.9e-93 344.7 215 80.9
TraesCS5B02G171400 Triticum aestivum HOM04x5M004993 ORTHO04x5M007440 4.3e-93 343.6 215 80.9
TRITD5Bv1G107070 Triticum turgidum HOM04x5M004993 ORTHO04x5M007440 4.3e-93 343.6 215 80.9
Aco017116 Ananas comosus HOM04x5M004993 ORTHO04x5M007440 1.5e-82 308.5 215 73.0
p5.00_sc00020_p0166 Elaeis guineensis HOM04x5M004993 ORTHO04x5M007440 7.6e-82 306.2 215 72.6
Sspon.07G0009390-3C Saccharum spontaneum HOM04x5M000049 ORTHO04x5M000028 2.2e-81 304.7 183 86.3
Ma01_g00040 Musa acuminata HOM04x5M004993 ORTHO04x5M007440 5.5e-80 300.1 215 70.7
Zjn_sc00035.1.g00590.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004993 ORTHO04x5M007440 1.6e-79 298.5 206 75.7
Oropetium_20150105_25268 Oropetium thomaeum HOM04x5M004993 ORTHO04x5M007440 3.9e-78 293.9 184 81.5
PEQU_01216 Phalaenopsis equestris HOM04x5M004993 ORTHO04x5M007440 2.6e-74 281.2 215 68.4
evm.TU.AsparagusV1_01.217.V1.1 Asparagus officinalis HOM04x5M004993 ORTHO04x5M007440 1.2e-71 272.3 215 67.0
GSVIVG01025336001 Vitis vinifera HOM04x5M004993 ORTHO04x5M007440 3.3e-69 264.2 213 63.4
AT3G20780 Arabidopsis thaliana HOM04x5M004993 ORTHO04x5M007440 3.1e-67 257.7 216 62.0
Spipo5G0015900 Spirodela polyrhiza HOM04x5M004993 ORTHO04x5M007440 3.1e-67 257.7 216 64.8
ATR0605G091 Amborella trichopoda HOM04x5M004993 ORTHO04x5M007440 5.9e-66 253.4 213 62.4
Solyc01g014490.2 Solanum lycopersicum HOM04x5M004993 ORTHO04x5M007440 5.9e-66 253.4 217 59.9
Zosma418g00070 Zostera marina HOM04x5M004993 ORTHO04x5M007440 7.7e-66 253.1 215 62.8
Potri.003G211000 Populus trichocarpa HOM04x5M004993 ORTHO04x5M007440 1.7e-65 251.9 215 58.6
Mapoly0042s0060 Marchantia polymorpha HOM04x5M004993 ORTHO04x5M007440 2.0e-58 228.4 213 56.8
Pp3c22_12720 Physcomitrium patens HOM04x5M004993 ORTHO04x5M007440 7.7e-58 226.5 213 56.8
gene10704 Selaginella moellendorffii HOM04x5M004993 ORTHO04x5M007440 1.7e-57 225.3 215 57.2
gene23251 Selaginella moellendorffii HOM04x5M004993 ORTHO04x5M007440 1.7e-57 225.3 215 57.2
Misin04G142500 Miscanthus sinensis HOM04x5M004993 ORTHO04x5M007440 3.8e-49 197.6 131 80.2
CALSI_Maker00003273 Calamus simplicifolius HOM04x5M004993 ORTHO04x5M007440 7.2e-48 193.4 194 56.2
Cre01.g019750 Chlamydomonas reinhardtii HOM04x5M004993 ORTHO04x5M007440 2.1e-39 165.2 221 43.0
MCO09G243 Micromonas commoda HOM04x5M004993 ORTHO04x5M007440 2.3e-33 145.2 232 41.4
CALSI_Maker00003260 Calamus simplicifolius HOM04x5M004993 ORTHO04x5M007440 2.8e-31 138.3 96 70.8
PAB00044103 Picea abies HOM04x5M004993 ORTHO04x5M007440 1.1e-16 89.7 48 85.4

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (1 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (1 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings