Interactive Phylogenetics Module

Gene Id
Zm00007a00012257

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00007a00012257 Zea mays B104 HOM04x5M001926 ORTHO04x5M001925 2.4e-191 671.0 425 100.0
Zm00008a028484 Zea mays PH207 HOM04x5M001926 ORTHO04x5M001925 4.9e-112 407.5 234 97.4
Zm00008a031678 Zea mays PH207 HOM04x5M001926 ORTHO04x5M001925 8.4e-88 327.0 234 84.6
Zm00001d042567 Zea mays B73 HOM04x5M001926 ORTHO04x5M001925 1.0e-85 320.1 195 91.3
Zm00001d049733 Zea mays B73 HOM04x5M001926 ORTHO04x5M001925 2.1e-83 312.4 235 79.1
Zm00008a013092 Zea mays PH207 HOM04x5M001926 ORTHO04x5M001925 4.2e-71 271.6 230 71.7
Misin06G352200 Miscanthus sinensis HOM04x5M001926 ORTHO04x5M001925 1.1e-68 263.5 211 73.5
Sobic.003G383300 Sorghum bicolor HOM04x5M001926 ORTHO04x5M001925 1.0e-64 250.4 211 71.6
Seita.5G408500 Setaria italica HOM04x5M001926 ORTHO04x5M001925 3.1e-58 228.8 212 65.1
Sspon.03G0001590-2B Saccharum spontaneum HOM04x5M001926 ORTHO04x5M001925 2.2e-56 222.6 231 64.5
Zm00008a015702 Zea mays PH207 HOM04x5M001926 ORTHO04x5M001925 5.5e-55 218.0 117 97.4
Sspon.03G0001590-1A Saccharum spontaneum HOM04x5M001926 ORTHO04x5M001925 3.0e-53 212.2 170 77.6
Zm00008a026057 Zea mays PH207 HOM04x5M002334 ORTHO04x5M001925 1.7e-48 196.4 212 61.8
Zm00007a00020553 Zea mays B104 HOM04x5M007277 ORTHO04x5M012024 7.2e-47 191.0 137 89.1
Zm00001d021088 Zea mays B73 HOM04x5M001926 ORTHO04x5M001925 4.7e-46 188.3 108 100.0
Zm00007a00042426 Zea mays B104 HOM04x5M007277 ORTHO04x5M012024 1.5e-44 183.3 181 76.8
Sspon.05G0027680-1B Saccharum spontaneum HOM04x5M001926 ORTHO04x5M001925 9.4e-39 164.1 211 50.2
Zm00007a00021765 Zea mays B104 HOM04x5M001926 ORTHO04x5M001925 3.3e-36 155.6 100 83.0
Zm00007a00013200 Zea mays B104 HOM04x5M007277 ORTHO04x5M012024 3.7e-35 152.1 206 60.2
Zm00007a00005404 Zea mays B104 HOM04x5M007277 ORTHO04x5M012024 1.1e-31 140.6 137 75.2
Sspon.03G0001600-2C Saccharum spontaneum HOM04x5M001926 ORTHO04x5M001925 2.5e-31 139.4 184 57.6
Zm00007a00017640 Zea mays B104 HOM04x5M007277 ORTHO04x5M012024 5.5e-31 138.3 132 77.3
Pgl_GLEAN_10032357 Cenchrus americanus HOM04x5M001926 ORTHO04x5M001925 1.2e-28 130.6 182 46.7
OsR498G0102487400.01 Oryza sativa ssp. indica HOM04x5M001926 ORTHO04x5M001925 4.4e-28 128.6 210 49.5
Zm00007a00035280 Zea mays B104 HOM04x5M007277 ORTHO04x5M012024 4.1e-26 122.1 346 40.2
Oropetium_20150105_13040 Oropetium thomaeum HOM04x5M001926 ORTHO04x5M001925 1.6e-25 120.2 176 53.4
TraesCS3D02G397500 Triticum aestivum HOM04x5M001926 ORTHO04x5M001925 2.1e-22 109.8 215 45.1
TRITD3Bv1G222700 Triticum turgidum HOM04x5M001926 ORTHO04x5M001925 1.4e-21 107.1 217 47.9
TraesCS3B02G435900 Triticum aestivum HOM04x5M001926 ORTHO04x5M001925 1.8e-21 106.7 215 48.4
Bradi2g57360 Brachypodium distachyon HOM04x5M001926 ORTHO04x5M001925 5.2e-21 105.1 204 46.1
TraesCS3A02G402500 Triticum aestivum HOM04x5M001926 ORTHO04x5M001925 8.8e-21 104.4 211 47.9
Zm00007a00012964 Zea mays B104 HOM04x5M000045 ORTHO04x5M000508 1.2e-20 104.0 195 38.5
LP027322 Lolium perenne HOM04x5M001926 ORTHO04x5M001925 2.8e-19 99.4 204 45.6
Zm00007a00034806 Zea mays B104 HOM04x5M007277 ORTHO04x5M012024 2.9e-16 89.4 354 33.3
TRITD3Av1G233870 Triticum turgidum HOM04x5M001926 ORTHO04x5M001925 6.6e-16 88.2 236 41.9
Zm00007a00039397 Zea mays B104 HOM04x5M001131 ORTHO04x5M017940 1.9e-15 86.7 47 93.6
Zm00008a034985 Zea mays PH207 HOM04x5M001131 ORTHO04x5M017940 1.9e-15 86.7 47 93.6
Zjn_sc00009.1.g04000.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001926 ORTHO04x5M001925 9.5e-15 84.3 173 35.8
HORVU3Hr1G090350 Hordeum vulgare HOM04x5M001926 ORTHO04x5M001925 5.2e-13 78.6 177 42.9
Zm00007a00014154 Zea mays B104 HOM04x5M001536 ORTHO04x5M006834 5.2e-13 78.6 47 87.2
Zm00008a016485 Zea mays PH207 HOM04x5M001536 ORTHO04x5M006834 5.2e-13 78.6 47 87.2
Zm00008a038215 Zea mays PH207 HOM04x5M007277 ORTHO04x5M017940 2.0e-12 76.6 43 90.7
Zm00008a021325 Zea mays PH207 HOM04x5M001087 ORTHO04x5M017940 5.7e-12 75.1 43 90.7
LOC_Os01g66580 Oryza sativa ssp. japonica HOM04x5M001926 ORTHO04x5M001925 2.0e-09 66.6 209 31.1

Amborella trichopoda (0 genes)
Ananas comosus (0 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (0 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (0 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (1 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (0 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (0 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Picea abies (0 genes)
Populus trichocarpa (0 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (1 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (0 genes)
Zea mays B73 (3 genes)
Zea mays B104 (12 genes)
Zea mays PH207 (9 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings