Interactive Phylogenetics Module

Gene Id
Zm00001d042450

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d042450 Zea mays B73 HOM04x5M005382 ORTHO04x5M006527 0.0e+00 1129.8 611 100.0
Zm00007a00017129 Zea mays B104 HOM04x5M005382 ORTHO04x5M006527 0.0e+00 1129.8 611 100.0
Sobic.003G394300 Sorghum bicolor HOM04x5M005382 ORTHO04x5M006527 0.0e+00 1080.1 613 94.8
Misin06G362700 Miscanthus sinensis HOM04x5M005382 ORTHO04x5M006527 1.3e-310 1067.8 612 94.9
Seita.5G420200 Setaria italica HOM04x5M005382 ORTHO04x5M006527 1.9e-290 1000.7 614 89.6
Zm00008a013007 Zea mays PH207 HOM04x5M005382 ORTHO04x5M006527 1.5e-287 991.1 555 92.8
Pgl_GLEAN_10010471 Cenchrus americanus HOM04x5M005382 ORTHO04x5M006527 7.4e-279 962.2 569 87.5
Sspon.03G0028620-2C Saccharum spontaneum HOM04x5M005382 ORTHO04x5M006527 2.5e-274 947.2 849 67.4
Bradi2g58077 Brachypodium distachyon HOM04x5M005382 ORTHO04x5M006527 4.4e-255 883.2 614 79.8
LP034953 Lolium perenne HOM04x5M005382 ORTHO04x5M006527 4.7e-249 863.2 551 81.1
Misin06G412600 Miscanthus sinensis HOM04x5M005382 ORTHO04x5M006527 2.0e-239 831.2 477 95.2
OsR498G0102541400.01 Oryza sativa ssp. indica HOM04x5M005382 ORTHO04x5M006527 1.2e-236 822.0 553 80.1
OB01G49790 Oryza brachyantha HOM04x5M005382 ORTHO04x5M006527 5.9e-236 819.7 555 80.9
TraesCS3B02G422600 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 1.0e-235 818.9 616 74.7
TraesCS3A02G390800 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 1.5e-234 815.1 617 74.4
HORVU3Hr1G088460 Hordeum vulgare HOM04x5M005382 ORTHO04x5M006527 9.5e-234 812.4 618 74.3
TraesCS3D02G383400 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 1.8e-232 808.1 598 73.4
Aco024203 Ananas comosus HOM04x5M005382 ORTHO04x5M006527 1.7e-230 801.6 552 72.1
HORVU3Hr1G088480 Hordeum vulgare HOM04x5M005382 ORTHO04x5M006527 1.1e-229 798.9 557 74.7
TRITD3Bv1G217010 Triticum turgidum HOM04x5M005382 ORTHO04x5M006527 1.8e-229 798.1 618 73.8
TRITD3Av1G230650 Triticum turgidum HOM04x5M005382 ORTHO04x5M006527 9.2e-229 795.8 578 72.5
PH01000229G0250 Phyllostachys edulis HOM04x5M005382 ORTHO04x5M006527 2.9e-227 790.8 628 68.8
LOC_Os01g67920 Oryza sativa ssp. japonica HOM04x5M005382 ORTHO04x5M006527 1.2e-209 732.3 454 82.2
Oropetium_20150105_13135 Oropetium thomaeum HOM04x5M005382 ORTHO04x5M006527 4.6e-204 713.8 438 84.0
evm.TU.AsparagusV1_04.597.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 5.6e-202 706.8 601 59.9
Ma08_g08710 Musa acuminata HOM04x5M005382 ORTHO04x5M006527 2.8e-201 704.5 598 60.2
PEQU_32184 Phalaenopsis equestris HOM04x5M005382 ORTHO04x5M006527 1.5e-194 682.2 552 60.9
Solyc06g071850.2 Solanum lycopersicum HOM04x5M005382 ORTHO04x5M006527 2.0e-183 645.2 524 61.1
PH01000031G1370 Phyllostachys edulis HOM04x5M005382 ORTHO04x5M006527 1.9e-178 628.6 629 59.1
GSVIVG01007574001 Vitis vinifera HOM04x5M005382 ORTHO04x5M006527 3.1e-176 621.3 631 53.2
ATR0824G019 Amborella trichopoda HOM04x5M005382 ORTHO04x5M006527 4.5e-175 617.5 632 53.5
CALSI_Maker00005234 Calamus simplicifolius HOM04x5M005382 ORTHO04x5M006527 6.9e-160 567.0 576 54.2
Zosma79g00200 Zostera marina HOM04x5M005382 ORTHO04x5M006527 1.2e-156 556.2 558 52.9
p5.00_sc00130_p0062 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 2.2e-150 535.4 634 49.1
AT5G63200 Arabidopsis thaliana HOM04x5M005382 ORTHO04x5M006527 7.2e-149 530.4 637 48.0
Potri.012G092000 Populus trichocarpa HOM04x5M005382 ORTHO04x5M006527 2.1e-148 528.9 529 53.5
Sspon.03G0028540-1B Saccharum spontaneum HOM04x5M000049 ORTHO04x5M006527 3.8e-142 508.1 364 83.8
gene5094 Selaginella moellendorffii HOM04x5M005382 ORTHO04x5M006527 2.7e-132 475.3 524 48.9
gene7444 Selaginella moellendorffii HOM04x5M005382 ORTHO04x5M006527 2.7e-132 475.3 524 48.9
Mapoly0013s0178 Marchantia polymorpha HOM04x5M005382 ORTHO04x5M006527 7.5e-130 467.2 537 46.9
ASH_gene1600 Apostasia shenzhenica HOM04x5M005382 ORTHO04x5M006527 1.5e-122 443.0 566 44.9
Spipo4G0035200 Spirodela polyrhiza HOM04x5M005382 ORTHO04x5M006527 5.2e-107 391.3 317 60.9
Sspon.03G0000770-2B Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 1.8e-83 313.2 156 98.7
Spipo4G0035300 Spirodela polyrhiza HOM04x5M005382 ORTHO04x5M006527 1.3e-62 243.8 259 53.3
Oropetium_20150105_13136 Oropetium thomaeum HOM04x5M005382 ORTHO04x5M006527 4.3e-45 185.7 111 85.6
PAB00064933 Picea abies HOM04x5M005382 ORTHO04x5M006527 2.6e-42 176.4 144 62.5
evm.TU.AsparagusV1_05.2410.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 1.0e-41 174.5 138 60.1
evm.TU.AsparagusV1_08.1960.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 3.2e-40 169.5 130 60.8
Zjn_sc00034.1.g03860.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005382 ORTHO04x5M006527 1.0e-38 164.5 251 50.6
PAB00061745 Picea abies HOM04x5M005382 ORTHO04x5M006527 1.8e-30 137.1 122 57.4
evm.TU.AsparagusV1_08.2080.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 1.4e-27 127.5 98 58.2
PAB00026557 Picea abies HOM04x5M005382 ORTHO04x5M006527 2.4e-27 126.7 111 55.0
Sspon.03G0028620-1B Saccharum spontaneum HOM04x5M005382 ORTHO04x5M006527 6.5e-25 118.6 103 90.3
p5.00_sc00032_p0014 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 1.9e-24 117.1 82 72.0
PAB00034029 Picea abies HOM04x5M005382 ORTHO04x5M006527 9.7e-21 104.8 89 56.2
p5.00_sc00032_p0015 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 1.1e-19 101.3 72 63.9

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (0 genes)
Picea abies (4 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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