Interactive Phylogenetics Module

Gene Id
Zm00001d041625

Contact Settings

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Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d041625 Zea mays B73 HOM04x5M004591 ORTHO04x5M005491 0.0e+00 1120.1 572 100.0
Zm00008a012364 Zea mays PH207 HOM04x5M004591 ORTHO04x5M005491 9.0e-303 1041.6 577 94.1
Zm00008a036741 Zea mays PH207 HOM04x5M004591 ORTHO04x5M005491 2.2e-269 930.6 579 85.0
Zm00001d023817 Zea mays B73 HOM04x5M004591 ORTHO04x5M005491 3.8e-269 929.9 579 84.8
Misin14G119200 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 1.2e-267 924.9 585 85.5
Misin15G141500 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 7.9e-267 922.2 584 85.3
Sobic.008G125100 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 1.4e-263 911.4 587 84.0
Sspon.02G0043910-3D Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 4.1e-263 909.8 610 81.3
Seita.2G382200 Setaria italica HOM04x5M004591 ORTHO04x5M005491 1.4e-239 831.6 581 77.5
Pgl_GLEAN_10007040 Cenchrus americanus HOM04x5M004591 ORTHO04x5M005491 1.4e-215 751.9 582 71.6
Sspon.02G0043910-2C Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 1.3e-213 745.3 576 72.4
Bradi4g01215 Brachypodium distachyon HOM04x5M004591 ORTHO04x5M005491 3.9e-213 743.8 579 68.2
Zjn_sc00088.1.g00680.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004591 ORTHO04x5M005491 5.1e-205 716.8 586 67.2
TraesCS5B02G022900 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 6.6e-205 716.5 574 67.2
Oropetium_20150105_26144 Oropetium thomaeum HOM04x5M004591 ORTHO04x5M005491 1.9e-204 714.9 556 70.0
LOC_Os12g42870 Oryza sativa ssp. japonica HOM04x5M004591 ORTHO04x5M005491 1.8e-202 708.4 534 71.7
TRITD5Bv1G008000 Triticum turgidum HOM04x5M004591 ORTHO04x5M005491 8.9e-202 706.1 576 67.2
OB12G26130 Oryza brachyantha HOM04x5M004591 ORTHO04x5M005491 1.4e-199 698.7 574 65.7
TRITD5Av1G009960 Triticum turgidum HOM04x5M004591 ORTHO04x5M005491 1.2e-182 642.5 494 68.6
HORVU5Hr1G006850 Hordeum vulgare HOM04x5M004591 ORTHO04x5M005491 2.1e-174 615.1 580 59.8
TraesCS5A02G025100 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 6.0e-174 613.6 540 61.9
Zm00007a00028909 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 1.1e-170 602.8 330 93.9
Aco010714 Ananas comosus HOM04x5M004591 ORTHO04x5M005491 5.7e-164 580.5 540 59.8
CALSI_Maker00046052 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 4.8e-155 550.8 568 55.1
Ma10_g14640 Musa acuminata HOM04x5M004591 ORTHO04x5M005491 9.4e-151 536.6 554 55.4
Sspon.02G0043910-1T Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 2.2e-147 525.4 442 68.6
Zosma222g00340 Zostera marina HOM04x5M004591 ORTHO04x5M005491 1.3e-144 516.2 535 53.8
TraesCS5D02G031500 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 2.2e-144 515.4 359 74.1
p5.00_sc00001_p0333 Elaeis guineensis HOM04x5M004591 ORTHO04x5M005491 1.4e-141 506.1 563 54.4
PEQU_13280 Phalaenopsis equestris HOM04x5M004591 ORTHO04x5M005491 2.0e-140 502.3 537 52.3
ATR0661G386 Amborella trichopoda HOM04x5M004591 ORTHO04x5M005491 7.0e-138 493.8 537 52.1
evm.TU.AsparagusV1_01.2651.V1.1 Asparagus officinalis HOM04x5M004591 ORTHO04x5M005491 1.5e-135 486.1 538 50.2
OsR498G1222137800.01 Oryza sativa ssp. indica HOM04x5M004591 ORTHO04x5M005491 2.7e-134 481.9 368 70.4
GSVIVG01028720001 Vitis vinifera HOM04x5M004591 ORTHO04x5M005491 4.7e-134 481.1 539 49.7
Potri.015G022400 Populus trichocarpa HOM04x5M004591 ORTHO04x5M005491 9.8e-132 473.4 483 53.4
CALSI_Maker00004256 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 3.1e-130 468.4 561 49.0
Solyc06g051900.2 Solanum lycopersicum HOM04x5M004591 ORTHO04x5M005491 4.2e-127 458.0 563 46.5
AT5G41480 Arabidopsis thaliana HOM04x5M004591 ORTHO04x5M005491 1.5e-124 449.5 555 48.5
ASH_gene13367 Apostasia shenzhenica HOM04x5M004591 ORTHO04x5M005491 1.9e-111 406.0 555 43.2
Spipo14G0021500 Spirodela polyrhiza HOM04x5M004591 ORTHO04x5M005491 1.7e-107 392.9 338 60.7
Mapoly0084s0006 Marchantia polymorpha HOM04x5M004591 ORTHO04x5M005491 1.1e-103 380.2 543 43.8
gene32722 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 1.1e-98 363.6 531 41.8
Pp3c1_19310 Physcomitrium patens HOM04x5M004591 ORTHO04x5M005491 4.6e-97 358.2 568 39.1
gene9611 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 7.8e-97 357.5 531 41.4
PH01000955G0520 Phyllostachys edulis HOM04x5M004591 ORTHO04x5M005491 1.9e-95 352.8 489 45.4
Zm00007a00021750 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 6.0e-89 331.3 208 84.6
LP018771 Lolium perenne HOM04x5M004591 ORTHO04x5M005491 2.7e-73 279.3 250 60.4
CALSI_Maker00048144 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 1.6e-70 270.0 418 42.1
CALSI_Maker00020637 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 2.8e-54 216.1 247 51.8
Zm00007a00021748 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 6.3e-54 214.9 122 87.7
Cre03.g176800 Chlamydomonas reinhardtii HOM04x5M004591 ORTHO04x5M005491 1.4e-53 213.8 514 32.3
PAB00014791 Picea abies HOM04x5M004591 ORTHO04x5M005491 6.7e-32 141.7 180 43.9
MCO16G056 Micromonas commoda HOM04x5M004591 ORTHO04x5M005491 4.8e-30 135.6 259 35.1
Sobic.008G177850 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 8.5e-27 124.8 71 76.1
MisinT096700 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 1.1e-26 124.4 118 57.6
p5.00_sc00099_p0002 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 1.0e-24 117.9 244 33.6
Sspon.02G0053310-1C Saccharum spontaneum HOM04x5M000005 ORTHO04x5M000177 3.0e-24 116.3 163 45.4
gene850 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 2.6e-23 113.2 357 30.0
gene852 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 2.6e-23 113.2 357 30.0
gene7721 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 4.4e-23 112.5 357 29.7
evm.TU.AsparagusV1_08.3611.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 9.7e-23 111.3 550 26.9
gene1317 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 9.7e-23 111.3 517 25.9
ATR0559G016 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 2.2e-22 110.2 397 28.2
Ma09_g03530 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 6.3e-22 108.6 372 28.2
Zosma162g00210 Zostera marina HOM04x5M002239 ORTHO04x5M002625 6.3e-22 108.6 380 27.4
TRITD5Av1G257300 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 8.2e-22 108.2 533 25.9
Mapoly0010s0086 Marchantia polymorpha HOM04x5M002239 ORTHO04x5M002625 1.1e-21 107.8 556 26.1
HORVU4Hr1G089590 Hordeum vulgare HOM04x5M002239 ORTHO04x5M002625 1.4e-21 107.5 416 27.6
TraesCSU02G034000 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 2.4e-21 106.7 533 25.7
MisinT096800 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 3.1e-21 106.3 117 52.1
Aco016849 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 4.1e-21 105.9 413 25.9
TraesCS4B02G392600 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 5.3e-21 105.5 523 25.6
ASH_gene15508 Apostasia shenzhenica HOM04x5M002239 ORTHO04x5M002625 7.0e-21 105.1 208 34.1
gene16703 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 9.1e-21 104.8 217 34.1
Zjn_sc00092.1.g01510.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002239 ORTHO04x5M002625 2.0e-20 103.6 226 30.5
Ma06_g35910 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 2.7e-20 103.2 389 27.8
gene29954 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 3.5e-20 102.8 190 35.8
Spipo6G0074700 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 3.5e-20 102.8 215 32.1
gene25554 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 7.7e-20 101.7 183 34.4
TraesCS1A02G173700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.3e-19 100.9 245 31.0
TRITD1Av1G111900 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 1.3e-19 100.9 245 31.0
LP000959 Lolium perenne HOM04x5M002239 ORTHO04x5M002625 1.7e-19 100.5 263 30.0
Seita.9G571100 Setaria italica HOM04x5M002239 ORTHO04x5M002625 2.2e-19 100.1 266 30.5
OB03G10890 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 2.9e-19 99.8 248 30.6
PAB00036996 Picea abies HOM04x5M004591 ORTHO04x5M005491 2.9e-19 99.8 85 56.5
Ma01_g05040 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 3.8e-19 99.4 410 27.3
Oropetium_20150105_09415 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 3.8e-19 99.4 244 30.7
MCO10G081 Micromonas commoda HOM04x5M002239 ORTHO04x5M002625 5.0e-19 99.0 198 34.3
Pp3c24_9100 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 5.0e-19 99.0 348 28.4
Sobic.001G535500 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 8.5e-19 98.2 273 30.0
PAB00049973 Picea abies HOM04x5M004591 ORTHO04x5M005491 1.1e-18 97.8 80 65.0
Seita.9G200900 Setaria italica HOM04x5M002239 ORTHO04x5M002625 1.1e-18 97.8 186 32.8
Zosma129g00040 Zostera marina HOM04x5M002239 ORTHO04x5M002625 1.1e-18 97.8 225 31.6
Bradi1g77850 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 1.5e-18 97.4 198 31.3
LOC_Os03g02030 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 1.5e-18 97.4 227 31.3
OsR498G0305106600.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 1.5e-18 97.4 227 31.3
Sspon.01G0000640-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.5e-18 97.4 190 34.7
Potri.010G197800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 1.9e-18 97.1 212 33.0
Sspon.01G0000640-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.9e-18 97.1 190 34.2
Solyc05g052920.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 2.5e-18 96.7 186 33.9
GSVIVG01016464001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 2.5e-18 96.7 190 34.7
Misin01G518000 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 3.2e-18 96.3 194 34.5
Pp3c23_670 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 3.2e-18 96.3 348 28.4
GSVIVG01033555001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 3.2e-18 96.3 260 30.8
Zm00008a004043 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 3.2e-18 96.3 255 28.2
CALSI_Maker00039217 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 5.5e-18 95.5 214 33.2
Misin01G184500 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 5.5e-18 95.5 263 28.1
PEQU_09314 Phalaenopsis equestris HOM04x5M002239 ORTHO04x5M002625 5.5e-18 95.5 210 31.0
Sspon.01G0020910-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 5.5e-18 95.5 351 27.1
TraesCS1B02G190700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 5.5e-18 95.5 190 33.2
TRITD1Bv1G112470 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 5.5e-18 95.5 190 33.2
CALSI_Maker00006600 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 7.2e-18 95.1 135 45.2
Misin02G507900 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 7.2e-18 95.1 180 35.0
OB10G22100 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 7.2e-18 95.1 240 30.0
OsR498G1019001800.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 7.2e-18 95.1 241 29.0
Potri.008G060600 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 7.2e-18 95.1 208 30.8
Zm00008a036205 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 7.2e-18 95.1 180 33.9
ATR0721G042 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 1.6e-17 94.0 186 33.3
CALSI_Maker00013977 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 2.1e-17 93.6 241 28.2
Bradi3g30210 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 4.7e-17 92.4 240 30.4
Sspon.01G0020910-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 4.7e-17 92.4 178 32.6
p5.00_sc00032_p0096 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 6.1e-17 92.0 212 31.6
Spipo27G0015800 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 6.1e-17 92.0 218 32.1
AT3G55630 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 8.0e-17 91.7 186 32.8
AT3G10160 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 1.0e-16 91.3 362 27.1
TraesCS1D02G165100 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.0e-16 91.3 210 31.9
AT5G05980 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 1.4e-16 90.9 176 33.5
Potri.006G045400 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 1.4e-16 90.9 367 26.4
Pgl_GLEAN_10021628 Cenchrus americanus HOM04x5M002239 ORTHO04x5M002625 4.0e-16 89.4 210 31.0
Potri.016G041800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 1.2e-15 87.8 200 33.0
evm.TU.AsparagusV1_05.14.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 2.0e-15 87.0 230 31.3
Sspon.01G0000640-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 2.6e-15 86.7 180 32.8
Cre05.g239100 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 1.3e-14 84.3 199 30.7
Cre05.g239067 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 1.3e-14 84.3 199 30.7
Solyc04g016550.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 2.2e-14 83.6 329 29.5
Aco002379 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 2.8e-14 83.2 205 31.2
Sspon.01G0020910-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 8.3e-14 81.6 318 24.8
CALSI_Maker00015974 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 2.4e-13 80.1 395 26.1
Sobic.008G137200 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 5.4e-13 79.0 87 52.9
Sspon.01G0020910-4D Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.6e-12 77.4 263 25.5
Oropetium_20150105_21336 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 2.7e-12 76.6 146 31.5
Sspon.02G0031850-1T Saccharum spontaneum HOM04x5M000005 ORTHO04x5M000177 1.7e-11 73.9 155 41.3
PAB00032154 Picea abies HOM04x5M004591 ORTHO04x5M005491 2.9e-11 73.2 83 44.6
Sspon.02G0031820-2B Saccharum spontaneum HOM04x5M000005 ORTHO04x5M000177 7.2e-10 68.6 93 51.6
Sobic.001G201900 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 4.7e-09 65.9 263 23.6
CALSI_Maker00045140 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 1.0e-08 64.7 73 41.1
LOC_Os10g35940 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 1.0e-08 64.7 241 24.1
Misin02G171600 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 2.3e-08 63.5 192 25.5
Zm00001d048514 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 2.3e-08 63.5 339 25.1
gene35885 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 1.2e-07 61.2 57 45.6
PAB00014792 Picea abies HOM04x5M004591 ORTHO04x5M005491 1.5e-07 60.8 119 31.9
Zm00007a00051487 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 1.5e-07 60.8 180 26.1
Zm00001d032529 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 2.0e-07 60.5 180 26.1
Zm00007a00051220 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 2.0e-07 60.5 159 27.0

Amborella trichopoda (3 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (9 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (8 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (3 genes)
Picea abies (5 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (13 genes)
Selaginella moellendorffii (10 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (5 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (8 genes)
Triticum turgidum (5 genes)
Vitis vinifera (3 genes)
Zea mays B73 (4 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (4 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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