Interactive Phylogenetics Module

Gene Id
Zm00001d034380

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d034380 Zea mays B73 HOM04x5M007573 ORTHO04x5M009717 6.6e-153 543.1 374 100.0
Misin01G055600 Miscanthus sinensis HOM04x5M007573 ORTHO04x5M009717 6.2e-135 483.4 374 83.4
Misin02G040400 Miscanthus sinensis HOM04x5M007573 ORTHO04x5M009717 9.2e-131 469.5 380 83.2
Zm00007a00016215 Zea mays B104 HOM04x5M007573 ORTHO04x5M009717 4.1e-123 444.1 335 97.3
Seita.9G062200 Setaria italica HOM04x5M007573 ORTHO04x5M009717 5.4e-115 417.2 375 71.7
Sspon.01G0029910-2D Saccharum spontaneum HOM04x5M007573 ORTHO04x5M009717 4.3e-104 380.9 335 86.0
Zm00001d013100 Zea mays B73 HOM04x5M007573 ORTHO04x5M009717 4.3e-104 380.9 325 76.9
Zm00007a00047457 Zea mays B104 HOM04x5M007573 ORTHO04x5M009717 4.3e-104 380.9 336 75.0
Zm00008a019244 Zea mays PH207 HOM04x5M007573 ORTHO04x5M009717 4.3e-104 380.9 336 75.0
Sspon.01G0029910-1A Saccharum spontaneum HOM04x5M007573 ORTHO04x5M009717 2.1e-103 378.6 335 86.3
Sobic.001G063100 Sorghum bicolor HOM04x5M007573 ORTHO04x5M009717 9.0e-102 373.2 327 82.3
Zm00008a005426 Zea mays PH207 HOM04x5M007573 ORTHO04x5M009717 3.8e-100 367.9 222 99.5
TraesCS5B02G429000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 4.2e-91 337.8 336 67.6
TRITD5Bv1G212160 Triticum turgidum HOM04x5M007573 ORTHO04x5M009717 4.2e-91 337.8 338 67.8
LOC_Os03g57530 Oryza sativa ssp. japonica HOM04x5M007573 ORTHO04x5M009717 1.0e-89 333.2 380 63.2
OsR498G0307179400.01 Oryza sativa ssp. indica HOM04x5M007573 ORTHO04x5M009717 1.0e-89 333.2 380 63.2
TraesCS5D02G435000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 1.3e-81 306.2 289 66.1
TraesCS5A02G427100 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 2.3e-81 305.4 289 63.7
Bradi1g06250 Brachypodium distachyon HOM04x5M007573 ORTHO04x5M009717 4.3e-80 301.2 336 67.3
TRITD5Av1G215750 Triticum turgidum HOM04x5M007573 ORTHO04x5M009717 5.7e-80 300.8 289 63.0
HORVU5Hr1G103790 Hordeum vulgare HOM04x5M007573 ORTHO04x5M009717 3.1e-78 295.0 340 58.8
Zjn_sc00014.1.g06900.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M007573 ORTHO04x5M009717 4.5e-77 291.2 342 62.3
PH01000458G0270 Phyllostachys edulis HOM04x5M007573 ORTHO04x5M009717 5.5e-75 284.3 327 60.2
LP029224 Lolium perenne HOM04x5M007573 ORTHO04x5M009717 3.0e-73 278.5 340 61.2
Pgl_GLEAN_10033819 Cenchrus americanus HOM04x5M007573 ORTHO04x5M009717 5.1e-73 277.7 238 79.0
OB03G43760 Oryza brachyantha HOM04x5M007573 ORTHO04x5M009717 3.8e-60 235.0 289 57.4
Zjn_sc00013.1.g06640.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04x5M007573 ORTHO04x5M009717 1.2e-48 196.8 249 53.4
LP037141 Lolium perenne HOM04x5M007573 ORTHO04x5M009717 1.7e-44 183.0 333 41.7
TraesCS2A02G248000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 1.7e-36 156.4 344 40.4
OsR498G0713568600.01 Oryza sativa ssp. indica HOM04x5M007573 ORTHO04x5M009717 1.1e-35 153.7 268 45.9
PH01249411G0010 Phyllostachys edulis HOM04x5M007573 ORTHO04x5M009717 4.1e-30 135.2 146 60.3
TraesCS5B02G259000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 1.2e-29 133.7 357 38.4
TraesCS5D02G268100 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 2.3e-28 129.4 285 43.2
evm.TU.AsparagusV1_03.437.V1.1 Asparagus officinalis HOM04x5M001892 ORTHO04x5M002029 3.6e-26 122.1 340 37.9
Seita.8G028900 Setaria italica HOM04x5M007573 ORTHO04x5M009717 2.6e-24 115.9 297 48.1
p5.00_sc02709_p0001 Elaeis guineensis HOM04x5M001892 ORTHO04x5M002029 1.3e-23 113.6 383 30.0
CALSI_Maker00009579 Calamus simplicifolius HOM04x5M001892 ORTHO04x5M002029 1.7e-23 113.2 387 31.8
ASH_gene16335 Apostasia shenzhenica HOM04x5M001892 ORTHO04x5M002029 3.9e-20 102.1 342 29.8
Ma04_g29270 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 3.9e-20 102.1 379 29.6
LOC_Os07g06810 Oryza sativa ssp. japonica HOM04x5M007573 ORTHO04x5M009717 1.5e-19 100.1 223 39.5
Aco008758 Ananas comosus HOM04x5M001892 ORTHO04x5M002029 2.5e-19 99.4 311 31.2
GSVIVG01022511001 Vitis vinifera HOM04x5M001892 ORTHO04x5M002029 2.5e-19 99.4 339 28.3
Zjn_sc00051.1.g01820.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002876 ORTHO04x5M003544 3.3e-19 99.0 235 45.5
Potri.016G065200 Populus trichocarpa HOM04x5M001892 ORTHO04x5M002029 2.8e-18 95.9 424 26.9
Solyc11g045480.1 Solanum lycopersicum HOM04x5M001892 ORTHO04x5M002029 1.8e-17 93.2 119 41.2
Ma03_g15890 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 3.1e-17 92.4 358 29.3
Potri.006G199000 Populus trichocarpa HOM04x5M001892 ORTHO04x5M002029 5.2e-17 91.7 129 38.0
Ma08_g27410 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 7.5e-16 87.8 352 29.0
p5.00_sc00170_p0040 Elaeis guineensis HOM04x5M001892 ORTHO04x5M002029 1.3e-15 87.0 374 26.2
Solyc10g081620.1 Solanum lycopersicum HOM04x5M001892 ORTHO04x5M002029 2.2e-15 86.3 119 41.2
Aco021022 Ananas comosus HOM04x5M001892 ORTHO04x5M002029 8.3e-15 84.3 365 31.5
Aco005147 Ananas comosus HOM04x5M001892 ORTHO04x5M002029 1.4e-14 83.6 147 36.7
AT3G54740 Arabidopsis thaliana HOM04x5M001892 ORTHO04x5M002029 1.4e-14 83.6 333 27.3
AT5G06560 Arabidopsis thaliana HOM04x5M001892 ORTHO04x5M002029 2.4e-14 82.8 120 35.8
Ma01_g07720 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 5.4e-14 81.6 340 28.2
Ma08_g04570 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 5.4e-14 81.6 307 31.3
CALSI_Maker00034293 Calamus simplicifolius HOM04x5M001892 ORTHO04x5M002029 9.2e-14 80.9 110 38.2
evm.TU.AsparagusV1_01.3380.V1.1 Asparagus officinalis HOM04x5M001892 ORTHO04x5M002029 2.1e-13 79.7 110 40.0
TRITD2Av1G133040 Triticum turgidum HOM04x5M007573 ORTHO04x5M009717 2.1e-13 79.7 107 50.5
Zosma39g00700 Zostera marina HOM04x5M001892 ORTHO04x5M002029 4.6e-13 78.6 383 25.6
ASH_gene10223 Apostasia shenzhenica HOM04x5M001892 ORTHO04x5M002029 1.7e-12 76.6 283 30.7
AT3G11850 Arabidopsis thaliana HOM04x5M001892 ORTHO04x5M002029 1.7e-12 76.6 159 30.2
Sspon.01G0024340-1A Saccharum spontaneum HOM04x5M001892 ORTHO04x5M002029 1.7e-12 76.6 157 33.8
Pgl_GLEAN_10011558 Cenchrus americanus HOM04x5M001892 ORTHO04x5M002029 2.3e-12 76.3 157 33.8
Sobic.001G151900 Sorghum bicolor HOM04x5M001892 ORTHO04x5M002029 2.3e-12 76.3 157 33.8
ASH_gene3350 Apostasia shenzhenica HOM04x5M001892 ORTHO04x5M002029 3.0e-12 75.9 350 27.1
Sspon.01G0024340-2B Saccharum spontaneum HOM04x5M001892 ORTHO04x5M002029 3.0e-12 75.9 157 33.1
Zm00001d013658 Zea mays B73 HOM04x5M001892 ORTHO04x5M002029 3.0e-12 75.9 157 33.1
Sspon.01G0024340-3C Saccharum spontaneum HOM04x5M001892 ORTHO04x5M002029 3.9e-12 75.5 157 33.1
Misin01G148300 Miscanthus sinensis HOM04x5M001892 ORTHO04x5M002029 5.1e-12 75.1 157 33.1
Zm00001d033504 Zea mays B73 HOM04x5M001892 ORTHO04x5M002029 6.6e-12 74.7 153 34.0
Zm00007a00002583 Zea mays B104 HOM04x5M001892 ORTHO04x5M002029 6.6e-12 74.7 153 34.0
Zm00007a00027739 Zea mays B104 HOM04x5M001892 ORTHO04x5M002029 1.1e-11 73.9 157 31.8
Zm00008a019730 Zea mays PH207 HOM04x5M001892 ORTHO04x5M002029 1.1e-11 73.9 157 31.8
Misin02G114300 Miscanthus sinensis HOM04x5M001892 ORTHO04x5M002029 1.9e-11 73.2 157 31.8
Zm00008a004810 Zea mays PH207 HOM04x5M001892 ORTHO04x5M002029 2.5e-11 72.8 153 33.3
CALSI_Maker00029459 Calamus simplicifolius HOM04x5M001892 ORTHO04x5M002029 5.6e-11 71.6 315 27.9
evm.TU.AsparagusV1_05.1641.V1.1 Asparagus officinalis HOM04x5M001892 ORTHO04x5M002029 7.3e-11 71.2 115 40.0
Misin09G161400 Miscanthus sinensis HOM04x5M001892 ORTHO04x5M002029 9.5e-11 70.9 134 35.8
LOC_Os03g44800 Oryza sativa ssp. japonica HOM04x5M001892 ORTHO04x5M002029 1.6e-10 70.1 158 31.6
OsR498G0306680500.01 Oryza sativa ssp. indica HOM04x5M001892 ORTHO04x5M002029 1.6e-10 70.1 158 31.6
Zosma116g00440 Zostera marina HOM04x5M001892 ORTHO04x5M002029 1.6e-10 70.1 105 39.0
HORVU4Hr1G041430 Hordeum vulgare HOM04x5M001892 ORTHO04x5M002029 3.6e-10 68.9 120 35.8
Seita.9G153600 Setaria italica HOM04x5M001892 ORTHO04x5M002029 3.6e-10 68.9 157 31.8
Zm00001d007503 Zea mays B73 HOM04x5M001892 ORTHO04x5M002029 3.6e-10 68.9 119 37.0
Zm00007a00024927 Zea mays B104 HOM04x5M001892 ORTHO04x5M002029 3.6e-10 68.9 119 37.0
OB11G23430 Oryza brachyantha HOM04x5M001892 ORTHO04x5M002029 8.1e-10 67.8 118 35.6
OsR498G1120396500.01 Oryza sativa ssp. indica HOM04x5M001892 ORTHO04x5M002029 8.1e-10 67.8 119 36.1
PH01000005G0580 Phyllostachys edulis HOM04x5M001892 ORTHO04x5M002029 8.1e-10 67.8 169 33.1
Misin10G137400 Miscanthus sinensis HOM04x5M001892 ORTHO04x5M002029 1.1e-09 67.4 120 36.7
TraesCS4A02G159000 Triticum aestivum HOM04x5M001892 ORTHO04x5M002029 1.1e-09 67.4 120 35.8
TRITD4Av1G106670 Triticum turgidum HOM04x5M001892 ORTHO04x5M002029 1.1e-09 67.4 120 35.8
Ma02_g14640 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 1.4e-09 67.0 350 25.4
Bradi4g15750 Brachypodium distachyon HOM04x5M001892 ORTHO04x5M002029 2.3e-09 66.2 352 25.6
Bradi1g13510 Brachypodium distachyon HOM04x5M001892 ORTHO04x5M002029 2.3e-09 66.2 154 30.5
Seita.3G362500 Setaria italica HOM04x5M001892 ORTHO04x5M002029 3.1e-09 65.9 156 31.4
Pgl_GLEAN_10029928 Cenchrus americanus HOM04x5M001892 ORTHO04x5M002029 5.2e-09 65.1 138 34.1
LP029679 Lolium perenne HOM04x5M001892 ORTHO04x5M002029 5.2e-09 65.1 158 31.0
Ma05_g08510 Musa acuminata HOM04x5M001892 ORTHO04x5M002029 5.2e-09 65.1 352 28.7
PEQU_13390 Phalaenopsis equestris HOM04x5M001892 ORTHO04x5M002029 5.2e-09 65.1 317 28.1
Seita.8G158800 Setaria italica HOM04x5M001892 ORTHO04x5M002029 5.2e-09 65.1 119 34.5
Sspon.06G0015780-1A Saccharum spontaneum HOM04x5M001892 ORTHO04x5M002029 5.2e-09 65.1 119 35.3
HORVU5Hr1G092270 Hordeum vulgare HOM04x5M001892 ORTHO04x5M002029 8.9e-09 64.3 158 30.4
Sobic.005G160900 Sorghum bicolor HOM04x5M001892 ORTHO04x5M002029 1.2e-08 63.9 119 35.3
TraesCS5B02G373100 Triticum aestivum HOM04x5M001892 ORTHO04x5M002029 1.2e-08 63.9 158 30.4
TRITD5Bv1G191030 Triticum turgidum HOM04x5M001892 ORTHO04x5M002029 1.2e-08 63.9 158 30.4
TraesCS5D02G380300 Triticum aestivum HOM04x5M001892 ORTHO04x5M002029 2.0e-08 63.2 158 29.7
TraesCS1A02G147200 Triticum aestivum HOM04x5M001892 ORTHO04x5M002029 2.0e-08 63.2 134 34.3
TraesCS1B02G165300 Triticum aestivum HOM04x5M001892 ORTHO04x5M002029 2.0e-08 63.2 134 34.3
TRITD1Av1G090630 Triticum turgidum HOM04x5M001892 ORTHO04x5M002029 2.0e-08 63.2 134 34.3
TRITD1Bv1G094140 Triticum turgidum HOM04x5M001892 ORTHO04x5M002029 2.0e-08 63.2 134 34.3
LP005304 Lolium perenne HOM04x5M001892 ORTHO04x5M002029 3.4e-08 62.4 136 31.6
TraesCS5A02G370700 Triticum aestivum HOM04x5M001892 ORTHO04x5M002029 3.4e-08 62.4 158 29.7
LOC_Os11g36740 Oryza sativa ssp. japonica HOM04x5M001892 ORTHO04x5M002029 7.6e-08 61.2 340 25.9
Spipo24G0030700 Spirodela polyrhiza HOM04x5M001892 ORTHO04x5M002029 7.6e-08 61.2 351 26.8
Sobic.008G098098 Sorghum bicolor HOM04x5M001892 ORTHO04x5M002029 9.9e-08 60.8 144 30.6
OB03G35530 Oryza brachyantha HOM04x5M001892 ORTHO04x5M002029 2.9e-07 59.3 158 31.0
Bradi4g07197 Brachypodium distachyon HOM04x5M001892 ORTHO04x5M002029 6.4e-07 58.2 149 31.5
Bradi1g56922 Brachypodium distachyon HOM04x5M007573 ORTHO04x5M009717 1.1e-06 57.4 91 51.6
Pgl_GLEAN_10015857 Cenchrus americanus HOM04x5M001892 ORTHO04x5M002029 3.2e-06 55.8 130 29.2
PH01000510G0710 Phyllostachys edulis HOM04x5M000670 ORTHO04x5M000562 3.2e-06 55.8 48 64.6

Amborella trichopoda (0 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (3 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (5 genes)
Calamus simplicifolius (3 genes)
Cenchrus americanus (4 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (3 genes)
Lolium perenne (4 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (7 genes)
Oropetium thomaeum (0 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (4 genes)
Oryza sativa ssp. japonica (4 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (0 genes)
Picea abies (0 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (5 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (4 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (12 genes)
Triticum turgidum (7 genes)
Vitis vinifera (1 genes)
Zea mays B73 (5 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (4 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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