Interactive Phylogenetics Module

Gene Id
Zm00001d032632

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d032632 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1263.1 674 100.0
Zm00008a004117 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1229.9 700 95.3
Zm00007a00014538 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1218.4 651 100.0
Misin01G188300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1198.3 697 89.2
Sspon.01G0020010-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1192.9 665 92.0
Sspon.01G0020010-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1192.9 697 89.0
Misin02G189500 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1191.4 697 88.8
Sobic.001G211500 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1191.0 718 90.8
Sspon.01G0020010-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1189.9 672 91.4
Sspon.01G0019980-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1181.8 640 94.2
Seita.9G212100 Setaria italica HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1171.8 640 92.7
Pgl_GLEAN_10028670 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1151.7 627 93.3
Bradi3g29530 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1124.0 636 88.8
TraesCS1D02G172600 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1124.0 640 88.1
TraesCS1B02G184700 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1123.6 640 88.0
TraesCS1A02G172100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1122.8 640 88.1
HORVU1Hr1G044350 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1117.8 640 87.7
OB10G21140 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1109.0 628 89.0
LOC_Os10g34750 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1109.0 629 88.9
OsR498G1018951400.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1109.0 629 88.9
LP020896 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1108.2 640 86.7
TRITD1Bv1G107980 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1094.3 593 91.2
Aco007673 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 6.4e-308 1059.3 640 83.4
TRITD1Av1G110770 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 4.0e-302 1040.0 565 91.3
Ma04_g22700 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 2.4e-299 1030.8 641 80.7
Spipo16G0032600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 3.2e-291 1003.8 640 78.0
ASH_gene2944 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 1.7e-284 981.5 646 77.1
PEQU_15249 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 4.3e-280 966.8 641 76.0
Zosma34g01290 Zostera marina HOM04x5M001747 ORTHO04x5M002018 8.2e-279 962.6 640 75.0
PH01001204G0070 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 2.1e-274 948.0 565 85.3
CALSI_Maker00032487 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 1.8e-265 918.3 640 73.0
GSVIVG01031470001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 9.7e-264 912.5 640 71.4
ATR0329G039 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 1.2e-261 905.6 637 70.5
Solyc11g066370.1 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 1.6e-261 905.2 591 73.9
Potri.009G005900 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 4.7e-258 893.6 589 73.2
AT1G08130 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 1.4e-254 882.1 633 68.1
Mapoly0033s0129 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 2.7e-245 851.3 639 65.7
Pp3c13_20200 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 7.7e-245 849.7 638 65.4
Pp3c13_20209 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 7.7e-245 849.7 638 65.4
gene13434 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 2.3e-241 838.2 635 65.7
gene26512 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 8.9e-241 836.3 635 65.4
evm.TU.AsparagusV1_04.2270.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 6.1e-234 813.5 487 83.2
Sspon.01G0019980-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 2.8e-226 788.1 477 87.6
AT1G49250 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 1.9e-206 722.2 603 60.4
Oropetium_20150105_11084 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 2.8e-186 655.2 681 56.1
MCO11G338 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 1.5e-184 649.4 582 57.6
Cre07.g325716 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 6.9e-169 597.4 596 51.8
PH01000186G0040 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 2.9e-151 538.9 299 91.6
Sspon.01G0019980-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 4.2e-142 508.4 253 98.8
Mapoly0069s0045 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 4.7e-133 478.4 622 41.5
gene13766 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 1.3e-130 470.3 616 40.6
OB01G36030 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 1.7e-127 459.9 603 39.0
TraesCS3D02G265000 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 6.6e-127 458.0 600 39.0
TraesCS3A02G264800 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 6.6e-127 458.0 603 38.6
TRITD3Av1G176280 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 6.6e-127 458.0 603 38.6
HORVU3Hr1G063470 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 4.2e-126 455.3 600 38.8
LP029527 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 2.1e-125 453.0 620 38.1
Misin06G224100 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 4.7e-125 451.8 620 37.6
OsR498G0101784200.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 6.1e-125 451.4 620 38.1
TraesCS3B02G298100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 6.1e-125 451.4 598 38.5
TRITD3Bv1G156800 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 6.1e-125 451.4 600 38.5
Bradi2g46780 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 1.8e-124 449.9 620 38.2
Seita.5G274300 Setaria italica HOM04x5M001747 ORTHO04x5M002018 6.8e-124 448.0 620 37.6
GSVIVG01030942001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 4.4e-123 445.3 603 38.6
Ma04_g00670 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 5.7e-123 444.9 624 37.8
AT1G66730 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 7.5e-123 444.5 605 39.2
ATR0691G097 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 2.9e-122 442.6 612 39.2
CALSI_Maker00050199 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 4.9e-122 441.8 619 38.3
ASH_gene7517 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 2.4e-121 439.5 608 38.7
Solyc02g091120.2 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 1.6e-120 436.8 633 36.5
gene13033 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 2.4e-113 412.9 513 42.5
Sobic.003G260400 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 5.4e-113 411.8 540 38.9
LOC_Os01g49180 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 1.7e-111 406.8 685 33.9
Zjn_sc00017.1.g06380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 2.5e-110 402.9 614 44.3
PEQU_31644 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 2.8e-109 399.4 603 36.2
Pgl_GLEAN_10032519 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 8.6e-103 377.9 620 34.2
Oropetium_20150105_11565 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 1.3e-90 337.4 623 31.5
Potri.004G094300 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 1.6e-88 330.5 436 38.8
MCO09G458 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 6.6e-87 325.1 571 37.1
PH01000704G0390 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 3.8e-74 282.7 429 35.4
Sspon.03G0031770-1B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 8.4e-74 281.6 400 37.0
p5.00_sc00008_p0159 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 3.3e-62 243.0 344 37.5
Aco000044 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 1.1e-60 238.0 424 33.3
Zm00001d043835 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 3.8e-58 229.6 391 33.2
Cre06.g278177 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 1.1e-52 211.5 983 22.2
Zm00008a014124 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 3.6e-48 196.4 245 38.0
ATR0749G104 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 1.1e-46 191.4 109 82.6
ATR0749G050 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 3.7e-45 186.4 128 71.9
Sspon.03G0031770-2C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 5.3e-44 182.6 296 34.1
PAB00000364 Picea abies HOM04x5M001747 ORTHO04x5M002018 1.2e-43 181.4 116 73.3
evm.TU.AsparagusV1_09.814.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 4.2e-41 172.9 403 27.3
PAB00001978 Picea abies HOM04x5M001747 ORTHO04x5M002018 4.7e-40 169.5 110 74.5
Zm00007a00029335 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 7.9e-40 168.7 276 34.1
p5.00_sc00008_p0160 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 3.0e-39 166.8 166 45.8
PAB00005808 Picea abies HOM04x5M001747 ORTHO04x5M002018 3.0e-39 166.8 184 40.8
Spipo19G0024700 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 4.4e-38 162.9 224 38.8
PAB00036263 Picea abies HOM04x5M001747 ORTHO04x5M002018 7.7e-35 152.1 90 76.7
Spipo19G0024800 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 3.6e-32 143.3 228 36.4
PAB00006638 Picea abies HOM04x5M001747 ORTHO04x5M002018 5.7e-30 136.0 176 35.8
gene15054 Selaginella moellendorffii HOM04x5M004601 ORTHO04x5M005443 6.3e-29 132.5 546 24.0
gene25806 Selaginella moellendorffii HOM04x5M004601 ORTHO04x5M005443 3.1e-28 130.2 546 23.8
TraesCS2A02G431800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 1.6e-27 127.9 557 23.7
Pgl_GLEAN_10020369 Cenchrus americanus HOM04x5M004601 ORTHO04x5M005443 2.0e-27 127.5 324 27.8
TraesCS2D02G429800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 2.0e-27 127.5 559 24.0
Zjn_sc00011.1.g00310.1.cf.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 7.7e-27 125.6 140 42.9
Bradi5g20927 Brachypodium distachyon HOM04x5M004601 ORTHO04x5M005443 1.7e-26 124.4 335 27.8
TraesCS2B02G453300 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 3.8e-26 123.2 348 27.6
TRITD2Av1G250540 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 8.5e-26 122.1 350 28.0
Solyc07g017990.2 Solanum lycopersicum HOM04x5M004601 ORTHO04x5M005443 1.5e-25 121.3 345 26.4
Zm00008a014123 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 1.9e-25 120.9 155 38.7
Ma01_g18780 Musa acuminata HOM04x5M004601 ORTHO04x5M005443 3.2e-25 120.2 335 26.3
TRITD2Bv1G212650 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 3.2e-25 120.2 559 23.4
Potri.004G094200 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 1.2e-24 118.2 162 38.3
Sspon.03G0009130-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.2e-24 118.2 137 41.6
Zjn_sc00023.1.g02440.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004601 ORTHO04x5M005443 1.2e-24 118.2 336 27.1
Sobic.006G207300 Sorghum bicolor HOM04x5M004601 ORTHO04x5M005443 1.6e-24 117.9 537 22.0
Spipo28G0023000 Spirodela polyrhiza HOM04x5M004601 ORTHO04x5M005443 1.6e-24 117.9 349 25.8
GSVIVG01029314001 Vitis vinifera HOM04x5M004601 ORTHO04x5M005443 2.1e-24 117.5 339 25.1
evm.TU.AsparagusV1_01.2163.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 2.7e-24 117.1 108 48.1
AT5G57160 Arabidopsis thaliana HOM04x5M004601 ORTHO04x5M005443 2.7e-24 117.1 337 26.4
Potri.018G141900 Populus trichocarpa HOM04x5M004601 ORTHO04x5M005443 3.6e-24 116.7 334 25.7
ATR0626G236 Amborella trichopoda HOM04x5M004601 ORTHO04x5M005443 4.7e-24 116.3 341 26.7
PEQU_25681 Phalaenopsis equestris HOM04x5M004601 ORTHO04x5M005443 6.1e-24 115.9 348 26.7
evm.TU.AsparagusV1_08.2229.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 1.4e-23 114.8 102 48.0
LP005256 Lolium perenne HOM04x5M004601 ORTHO04x5M005443 1.4e-23 114.8 332 28.6
PH01000224G0720 Phyllostachys edulis HOM04x5M004601 ORTHO04x5M005443 2.3e-23 114.0 341 27.0
Seita.7G229000 Setaria italica HOM04x5M004601 ORTHO04x5M005443 2.3e-23 114.0 362 24.9
Mapoly0001s0137 Marchantia polymorpha HOM04x5M004601 ORTHO04x5M005443 5.2e-23 112.8 328 26.2
CALSI_Maker00020618 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 5.7e-22 109.4 140 41.4
Zm00001d002390 Zea mays B73 HOM04x5M004601 ORTHO04x5M005443 1.3e-21 108.2 330 25.8
Zm00007a00034356 Zea mays B104 HOM04x5M004601 ORTHO04x5M005443 1.1e-20 105.1 317 27.1
OsR498G0409240600.01 Oryza sativa ssp. indica HOM04x5M004601 ORTHO04x5M005443 2.9e-18 97.1 403 24.1
Zm00008a014122 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 8.5e-18 95.5 106 42.5
Oropetium_20150105_01621 Oropetium thomaeum HOM04x5M004601 ORTHO04x5M005443 1.5e-17 94.7 264 26.5
evm.TU.AsparagusV1_04.1989.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 2.3e-15 87.4 69 53.6
OB04G31400 Oryza brachyantha HOM04x5M004601 ORTHO04x5M005443 3.0e-15 87.0 152 34.2
ATR0749G026 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 1.2e-14 85.1 55 72.7
Zm00008a006350 Zea mays PH207 HOM04x5M004601 ORTHO04x5M005443 4.9e-13 79.7 317 23.7
Cre10.g433550 Chlamydomonas reinhardtii HOM04x5M004601 ORTHO04x5M005443 1.8e-12 77.8 363 22.9
CALSI_Maker00023721 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 7.0e-12 75.9 67 50.7
CALSI_Maker00003384 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 7.0e-12 75.9 74 45.9
Misin05G212200 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 3.5e-11 73.6 193 27.5
Zm00007a00029334 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 1.0e-10 72.0 76 42.1
Sspon.03G0031770-3D Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.3e-10 71.6 237 25.7
CALSI_Maker00001347 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 8.6e-10 68.9 68 45.6
PAB00058901 Picea abies HOM04x5M001747 ORTHO04x5M002018 8.6e-10 68.9 75 53.3
Spipo0G0169600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M013120 5.6e-09 66.2 93 37.6

Amborella trichopoda (6 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (5 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (6 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (3 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (2 genes)
Picea abies (6 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (6 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (5 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (3 genes)
Zea mays B73 (3 genes)
Zea mays B104 (4 genes)
Zea mays PH207 (5 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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