Interactive Phylogenetics Module

Gene Id
Zm00001d017868

Contact Settings

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Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d017868 Zea mays B73 HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1762.3 909 100.0
Zm00001d017865 Zea mays B73 HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1760.0 909 99.9
Zm00007a00011266 Zea mays B104 HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1677.9 909 96.7
Zm00007a00011263 Zea mays B104 HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1675.6 909 96.6
Sspon.04G0004760-2B Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1400.6 772 94.7
Misin08G264900 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1335.9 780 90.6
Sobic.004G257800 Sorghum bicolor HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1332.0 779 90.5
Sspon.04G0004760-1A Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1270.0 758 89.3
Oropetium_20150105_19210 Oropetium thomaeum HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1248.8 786 84.0
Zm00008a022840 Zea mays PH207 HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1216.8 680 94.9
OsR498G0204665200.01 Oryza sativa ssp. indica HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1191.4 776 81.8
LOC_Os02g48880 Oryza sativa ssp. japonica HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1184.5 775 81.8
Pgl_GLEAN_10010186 Cenchrus americanus HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1179.5 649 91.7
OB02G37640 Oryza brachyantha HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1159.4 715 83.6
Seita.1G299300 Setaria italica HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1152.5 691 87.7
TRITD6Bv1G167010 Triticum turgidum HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1142.9 767 78.9
HORVU6Hr1G071200 Hordeum vulgare HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1140.2 852 72.4
TraesCS6D02G264100 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1126.7 775 76.9
LP022520 Lolium perenne HOM04x5M001635 ORTHO04x5M001655 0.0e+00 1102.0 709 81.9
TraesCS6B02G312100 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 3.4e-304 1047.0 779 73.3
Bradi3g56670 Brachypodium distachyon HOM04x5M001635 ORTHO04x5M001655 1.2e-301 1038.5 775 72.9
Aco000832 Ananas comosus HOM04x5M001635 ORTHO04x5M001655 1.3e-298 1028.5 717 76.0
Aco015315 Ananas comosus HOM04x5M001635 ORTHO04x5M001655 2.4e-297 1024.2 736 74.2
Ma10_g31480 Musa acuminata HOM04x5M001635 ORTHO04x5M001655 4.4e-296 1020.0 767 71.8
p5.00_sc00198_p0029 Elaeis guineensis HOM04x5M001635 ORTHO04x5M001655 6.0e-293 1009.6 770 71.4
TraesCS7B02G136300 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 4.3e-291 1003.4 717 72.9
p5.00_sc00055_p0069 Elaeis guineensis HOM04x5M001635 ORTHO04x5M001655 1.3e-290 1001.9 780 70.1
Seita.6G198100 Setaria italica HOM04x5M001635 ORTHO04x5M001655 1.6e-290 1001.5 714 73.4
Bradi3g39350 Brachypodium distachyon HOM04x5M001635 ORTHO04x5M001655 8.1e-290 999.2 753 70.3
LP024409 Lolium perenne HOM04x5M001635 ORTHO04x5M001655 3.1e-289 997.3 717 72.2
Pgl_GLEAN_10012622 Cenchrus americanus HOM04x5M001635 ORTHO04x5M001655 5.3e-289 996.5 663 76.8
TraesCS7A02G240700 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 6.9e-289 996.1 717 72.4
TraesCS7D02G239700 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 6.9e-289 996.1 717 72.4
Zm00007a00037310 Zea mays B104 HOM04x5M001635 ORTHO04x5M001655 9.0e-289 995.7 728 72.4
LOC_Os08g38980 Oryza sativa ssp. japonica HOM04x5M001635 ORTHO04x5M001655 1.2e-288 995.3 720 72.6
OsR498G0816395300.01 Oryza sativa ssp. indica HOM04x5M001635 ORTHO04x5M001655 1.2e-288 995.3 720 72.6
Sspon.06G0000980-2B Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 2.6e-288 994.2 663 76.6
Sobic.007G218000 Sorghum bicolor HOM04x5M001635 ORTHO04x5M001655 2.2e-287 991.1 732 71.3
Zm00001d031318 Zea mays B73 HOM04x5M001635 ORTHO04x5M001655 8.4e-287 989.2 667 76.3
evm.TU.AsparagusV1_05.2119.V1.1 Asparagus officinalis HOM04x5M001635 ORTHO04x5M001655 1.9e-286 988.0 766 70.2
OB08G26380 Oryza brachyantha HOM04x5M001635 ORTHO04x5M001655 3.2e-286 987.3 720 72.4
Misin07G221400 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 3.5e-285 983.8 663 76.0
PH01000212G1260 Phyllostachys edulis HOM04x5M001635 ORTHO04x5M001655 3.0e-284 980.7 650 80.0
Zjn_sc00106.1.g00090.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001635 ORTHO04x5M001655 3.9e-284 980.3 716 72.5
TRITD7Bv1G062710 Triticum turgidum HOM04x5M001635 ORTHO04x5M001655 7.4e-283 976.1 704 72.7
TRITD7Av1G088580 Triticum turgidum HOM04x5M001635 ORTHO04x5M001655 1.8e-281 971.5 704 72.3
Misin07G467900 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 8.4e-279 962.6 585 87.0
CALSI_Maker00049403 Calamus simplicifolius HOM04x5M001635 ORTHO04x5M001655 1.1e-278 962.2 780 67.7
Oropetium_20150105_20292 Oropetium thomaeum HOM04x5M001635 ORTHO04x5M001655 1.3e-276 955.3 713 71.7
Spipo12G0024700 Spirodela polyrhiza HOM04x5M001635 ORTHO04x5M001655 2.1e-274 948.0 769 67.1
PEQU_24498 Phalaenopsis equestris HOM04x5M001635 ORTHO04x5M001655 4.5e-272 940.3 704 72.0
GSVIVG01014852001 Vitis vinifera HOM04x5M001635 ORTHO04x5M001655 1.9e-270 934.9 661 75.2
ATR0598G243 Amborella trichopoda HOM04x5M001635 ORTHO04x5M001655 3.9e-268 927.2 718 69.8
ASH_gene15628 Apostasia shenzhenica HOM04x5M001635 ORTHO04x5M001655 1.1e-265 919.1 764 66.8
Sspon.06G0000980-1A Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 5.3e-265 916.8 732 66.9
PH01003535G0210 Phyllostachys edulis HOM04x5M001635 ORTHO04x5M001655 9.0e-265 916.0 538 88.3
AT1G55620 Arabidopsis thaliana HOM04x5M001635 ORTHO04x5M001655 3.4e-264 914.1 795 64.0
Zjn_sc00015.1.g04990.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001635 ORTHO04x5M001655 6.1e-261 903.3 608 77.0
Zosma51g00410 Zostera marina HOM04x5M001635 ORTHO04x5M001655 9.7e-259 896.0 767 64.9
Sspon.06G0000980-3C Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 1.3e-258 895.6 627 73.8
Solyc07g066210.2 Solanum lycopersicum HOM04x5M001635 ORTHO04x5M001655 6.3e-258 893.3 727 65.7
Solyc10g005690.2 Solanum lycopersicum HOM04x5M001635 ORTHO04x5M001655 1.4e-254 882.1 720 65.4
Zm00008a003140 Zea mays PH207 HOM04x5M001635 ORTHO04x5M001655 2.6e-251 871.3 728 66.3
Potri.001G472700 Populus trichocarpa HOM04x5M001635 ORTHO04x5M001655 7.0e-249 863.2 656 69.7
TRITD6Av1G178430 Triticum turgidum HOM04x5M001635 ORTHO04x5M001655 4.2e-246 854.0 565 79.5
Sspon.04G0004760-3C Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 8.8e-244 846.3 463 95.2
Zosma45g00340 Zostera marina HOM04x5M001635 ORTHO04x5M001655 2.2e-242 841.6 664 66.9
Sspon.06G0000980-4D Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 5.5e-238 827.0 669 66.1
Zm00008a018024 Zea mays PH207 HOM04x5M001750 ORTHO04x5M001795 3.5e-232 807.7 616 70.1
TraesCS6A02G283600 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 1.0e-231 806.2 582 74.6
Misin13G191700 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 1.1e-222 776.2 556 76.1
CALSI_Maker00007099 Calamus simplicifolius HOM04x5M001635 ORTHO04x5M001655 3.6e-221 771.2 819 58.1
PAB00008647 Picea abies HOM04x5M001635 ORTHO04x5M001655 1.5e-206 722.6 586 66.6
Zm00001d052845 Zea mays B73 HOM04x5M001635 ORTHO04x5M001655 2.1e-192 675.6 615 62.0
Mapoly0179s0012 Marchantia polymorpha HOM04x5M001635 ORTHO04x5M001655 8.1e-189 663.7 660 55.0
Pp3c24_12700 Physcomitrium patens HOM04x5M001635 ORTHO04x5M001655 5.2e-188 661.0 655 55.4
Pp3c23_11730 Physcomitrium patens HOM04x5M001635 ORTHO04x5M001655 1.7e-186 656.0 655 56.5
PH01000435G0830 Phyllostachys edulis HOM04x5M001750 ORTHO04x5M001795 8.1e-181 637.1 614 58.0
gene3495 Selaginella moellendorffii HOM04x5M001635 ORTHO04x5M001655 4.9e-178 627.9 643 54.6
gene23470 Selaginella moellendorffii HOM04x5M001635 ORTHO04x5M001655 5.6e-174 614.4 643 53.7
Sspon.04G0004760-4D Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 2.7e-168 595.5 344 93.6
Misin07G220200 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 1.3e-167 593.2 724 51.4
HORVU7Hr1G049110 Hordeum vulgare HOM04x5M001635 ORTHO04x5M001655 6.3e-157 557.8 422 68.7
Pp3c13_4410 Physcomitrium patens HOM04x5M001635 ORTHO04x5M001655 2.1e-128 463.0 705 41.4
Zjn_sc00007.1.g06530.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001635 ORTHO04x5M001655 3.0e-127 459.1 684 45.8
Mapoly0001s0400 Marchantia polymorpha HOM04x5M001635 ORTHO04x5M001655 3.1e-124 449.1 684 41.4
Ma08_g26180 Musa acuminata HOM04x5M001635 ORTHO04x5M001655 2.2e-117 426.4 667 40.5
GSVIVG01023836001 Vitis vinifera HOM04x5M001635 ORTHO04x5M001655 2.4e-116 422.9 655 41.8
CALSI_Maker00049314 Calamus simplicifolius HOM04x5M001635 ORTHO04x5M001655 9.1e-116 421.0 642 40.7
p5.00_sc00130_p0014 Elaeis guineensis HOM04x5M001635 ORTHO04x5M001655 2.0e-115 419.9 647 39.6
Spipo5G0034800 Spirodela polyrhiza HOM04x5M001635 ORTHO04x5M001655 3.5e-115 419.1 648 40.4
ATR0605G301 Amborella trichopoda HOM04x5M001635 ORTHO04x5M001655 1.0e-114 417.5 682 39.6
evm.TU.AsparagusV1_05.1619.V1.1 Asparagus officinalis HOM04x5M001635 ORTHO04x5M001655 5.0e-114 415.2 651 40.6
OB01G37140 Oryza brachyantha HOM04x5M001635 ORTHO04x5M001655 1.2e-112 410.6 646 40.7
AT4G35440 Arabidopsis thaliana HOM04x5M001635 ORTHO04x5M001655 1.5e-110 403.7 681 38.6
OsR498G0101847100.01 Oryza sativa ssp. indica HOM04x5M001635 ORTHO04x5M001655 3.4e-110 402.5 641 39.9
TraesCS3D02G254500 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 5.7e-110 401.7 639 41.0
TraesCS3B02G285500 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 1.3e-109 400.6 639 40.8
TRITD3Bv1G148710 Triticum turgidum HOM04x5M001635 ORTHO04x5M001655 1.3e-109 400.6 639 40.8
Bradi2g47670 Brachypodium distachyon HOM04x5M001635 ORTHO04x5M001655 4.1e-108 395.6 634 39.3
PEQU_15165 Phalaenopsis equestris HOM04x5M001635 ORTHO04x5M001655 7.0e-108 394.8 622 41.0
Pgl_GLEAN_10020851 Cenchrus americanus HOM04x5M001635 ORTHO04x5M001655 9.2e-108 394.4 638 39.7
TraesCS3A02G253600 Triticum aestivum HOM04x5M001635 ORTHO04x5M001655 2.7e-107 392.9 653 40.1
Sspon.03G0004960-2B Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 3.5e-107 392.5 617 40.4
Seita.5G287500 Setaria italica HOM04x5M001635 ORTHO04x5M001655 1.3e-106 390.6 627 39.9
Zm00001d043721 Zea mays B73 HOM04x5M001635 ORTHO04x5M001655 2.3e-106 389.8 626 39.9
Zm00007a00023159 Zea mays B104 HOM04x5M001635 ORTHO04x5M001655 2.3e-106 389.8 626 39.9
Zm00008a014036 Zea mays PH207 HOM04x5M001635 ORTHO04x5M001655 2.3e-106 389.8 626 39.9
gene33693 Selaginella moellendorffii HOM04x5M001635 ORTHO04x5M001655 5.6e-105 385.2 626 40.6
Sobic.003G271400 Sorghum bicolor HOM04x5M001635 ORTHO04x5M001655 7.3e-105 384.8 617 40.0
gene15803 Selaginella moellendorffii HOM04x5M001635 ORTHO04x5M001655 7.3e-105 384.8 626 40.6
Misin05G261200 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 2.1e-104 383.3 547 42.8
ASH_gene16076 Apostasia shenzhenica HOM04x5M001635 ORTHO04x5M001655 3.0e-103 379.4 674 36.8
Sspon.03G0004960-1A Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 1.7e-101 373.6 547 42.2
Misin06G245200 Miscanthus sinensis HOM04x5M001635 ORTHO04x5M001655 3.9e-98 362.5 422 48.3
Oropetium_20150105_26368 Oropetium thomaeum HOM04x5M001635 ORTHO04x5M001655 2.0e-91 340.1 606 38.3
PH01000527G0910 Phyllostachys edulis HOM04x5M001635 ORTHO04x5M001655 1.3e-90 337.4 548 41.1
Sspon.04G0004760-1P Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 6.6e-90 335.1 186 90.3
Zm00001d051050 Zea mays B73 HOM04x5M002289 ORTHO04x5M001655 6.6e-90 335.1 178 98.3
Zm00007a00005054 Zea mays B104 HOM04x5M001635 ORTHO04x5M001655 6.6e-90 335.1 178 98.3
PAB00016374 Picea abies HOM04x5M001635 ORTHO04x5M001655 4.1e-84 315.8 392 46.9
Zjn_sc00011.1.g01090.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001635 ORTHO04x5M001655 2.1e-83 313.5 396 46.2
PH01000783G0570 Phyllostachys edulis HOM04x5M001635 ORTHO04x5M001655 1.0e-82 311.2 462 43.7
Zm00007a00017168 Zea mays B104 HOM04x5M001750 ORTHO04x5M001795 5.8e-78 295.4 394 47.5
TRITD3Av1G169960 Triticum turgidum HOM04x5M001635 ORTHO04x5M001655 7.3e-73 278.5 477 40.3
LP039746 Lolium perenne HOM04x5M001635 ORTHO04x5M001655 2.8e-72 276.6 488 38.7
Sspon.06G0000980-1P Saccharum spontaneum HOM04x5M001635 ORTHO04x5M001655 8.9e-71 271.6 241 56.8
MCO03G425 Micromonas commoda HOM04x5M001635 ORTHO04x5M001655 3.4e-70 269.6 502 38.8
OB03G29070 Oryza brachyantha HOM04x5M001635 ORTHO04x5M001655 3.2e-68 263.1 157 77.1
Aco017096 Ananas comosus HOM04x5M001635 ORTHO04x5M001655 2.7e-67 260.0 430 40.2
Solyc01g112310.2 Solanum lycopersicum HOM04x5M001635 ORTHO04x5M001655 1.5e-62 244.2 429 39.2
HORVU3Hr1G066240 Hordeum vulgare HOM04x5M001635 ORTHO04x5M001655 1.2e-54 218.0 412 37.6
LOC_Os01g50860 Oryza sativa ssp. japonica HOM04x5M001635 ORTHO04x5M001655 3.4e-54 216.5 407 37.3
Potri.004G209901 Populus trichocarpa HOM04x5M001635 ORTHO04x5M001655 1.6e-48 197.6 447 33.6
Solyc01g112300.2 Solanum lycopersicum HOM04x5M001635 ORTHO04x5M001655 7.6e-46 188.7 222 45.5
Zm00007a00020952 Zea mays B104 HOM04x5M001635 ORTHO04x5M001655 1.1e-33 148.3 84 98.8
Cre01.g037150 Chlamydomonas reinhardtii HOM04x5M001635 ORTHO04x5M001655 9.7e-33 145.2 330 33.3
Zm00001d020588 Zea mays B73 HOM04x5M002289 ORTHO04x5M030796 2.7e-27 127.1 90 81.1
Zm00007a00037600 Zea mays B104 HOM04x5M002289 ORTHO04x5M031114 3.9e-26 123.2 76 89.5
Zm00008a016711 Zea mays PH207 HOM04x5M001635 ORTHO04x5M031114 3.9e-26 123.2 68 95.6
LP039744 Lolium perenne HOM04x5M001635 ORTHO04x5M001655 7.7e-22 109.0 134 44.8
Zm00007a00028237 Zea mays B104 HOM04x5M001635 ORTHO04x5M251830 6.1e-19 99.4 150 51.3
Zm00008a028148 Zea mays PH207 HOM04x5M002289 ORTHO04x5M030796 2.8e-16 90.5 71 76.1
Zm00007a00042823 Zea mays B104 HOM04x5M001635 ORTHO04x5M254639 2.1e-11 74.3 102 57.8
Zm00001d020635 Zea mays B73 HOM04x5M002289 ORTHO04x5M030493 6.7e-10 69.3 55 72.7
Zm00007a00026665 Zea mays B104 HOM04x5M002289 ORTHO04x5M030493 6.7e-10 69.3 55 72.7
PAB00009259 Picea abies HOM04x5M001635 ORTHO04x5M001655 8.8e-10 68.9 205 28.3
PAB00041201 Picea abies HOM04x5M001635 ORTHO04x5M001655 2.6e-09 67.4 86 44.2
Zm00001d051103 Zea mays B73 HOM04x5M002289 ORTHO04x5M003511 1.3e-08 65.1 35 100.0
Zm00001d031633 Zea mays B73 HOM04x5M000172 ORTHO04x5M013644 7.7e-06 55.8 44 68.2
Zm00007a00011862 Zea mays B104 HOM04x5M000172 ORTHO04x5M013644 7.7e-06 55.8 42 69.0
Zm00008a003368 Zea mays PH207 HOM04x5M000172 ORTHO04x5M013644 7.7e-06 55.8 44 68.2

Amborella trichopoda (2 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (3 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (3 genes)
Lolium perenne (4 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (7 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (4 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (3 genes)
Picea abies (4 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (12 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (3 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (2 genes)
Zea mays B73 (10 genes)
Zea mays B104 (12 genes)
Zea mays PH207 (7 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

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