Interactive Phylogenetics Module

Gene Id
Zm00001d006031

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d006031 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 9.5e-197 688.7 367 100.0
Zm00007a00028357 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 8.0e-196 685.6 367 99.5
Zm00008a009131 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 1.1e-187 658.7 365 96.7
Sobic.002G248700 Sorghum bicolor HOM04x5M002412 ORTHO04x5M002551 1.1e-173 612.1 367 89.6
Zm00001d045948 Zea mays B73 HOM04x5M000039 ORTHO04x5M002551 4.7e-172 606.7 364 90.9
MisinT266100 Miscanthus sinensis HOM04x5M002412 ORTHO04x5M002551 2.0e-162 574.7 367 85.8
Zm00001d043192 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 7.6e-162 572.8 355 89.3
Zm00007a00022663 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 7.6e-162 572.8 355 89.3
Sspon.06G0001760-2P Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 1.4e-155 552.0 367 83.4
Sspon.06G0001760-1P Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 1.3e-153 545.4 367 82.6
Misin04G230000 Miscanthus sinensis HOM04x5M002412 ORTHO04x5M002551 1.7e-153 545.0 367 82.8
Zm00001d020948 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 4.9e-145 516.9 367 77.9
Zm00007a00035266 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 4.9e-145 516.9 367 77.9
Zm00007a00028008 Zea mays B104 HOM04x5M000039 ORTHO04x5M002551 1.9e-141 505.0 311 89.7
OsR498G0917731000.01 Oryza sativa ssp. indica HOM04x5M002412 ORTHO04x5M002551 2.6e-130 468.0 380 70.8
LOC_Os09g31458 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 5.0e-129 463.8 380 70.3
HORVU5Hr1G073600 Hordeum vulgare HOM04x5M002412 ORTHO04x5M002551 2.1e-127 458.4 374 69.5
TraesCS5D02G274500 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 6.7e-126 453.4 374 68.7
TraesCS5B02G266300 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.5e-125 452.2 374 68.7
TRITD5Bv1G149550 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 1.5e-125 452.2 374 68.7
PH01001573G0110 Phyllostachys edulis HOM04x5M002412 ORTHO04x5M002551 9.7e-125 449.5 358 69.8
TraesCS5A02G266700 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.7e-124 448.7 374 67.9
LP030105 Lolium perenne HOM04x5M002412 ORTHO04x5M002551 1.4e-120 435.6 373 67.3
TRITD5Av1G160070 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 1.4e-118 429.1 374 65.8
Bradi4g33830 Brachypodium distachyon HOM04x5M002412 ORTHO04x5M002551 8.8e-118 426.4 375 65.1
Zjn_sc00008.1.g09320.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 4.1e-115 417.5 367 65.4
Zm00008a028438 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 4.8e-108 394.0 365 63.6
Zm00008a037452 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 2.2e-105 385.2 223 89.2
TraesCS7B02G144200 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 2.8e-87 325.1 384 50.8
TraesCS7D02G245900 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 6.1e-87 323.9 379 50.9
TRITD7Bv1G067520 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 1.0e-86 323.2 384 50.5
TraesCS7A02G247300 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.4e-86 322.8 384 50.3
TRITD7Av1G093150 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 1.4e-86 322.8 384 50.3
OB08G26970 Oryza brachyantha HOM04x5M002412 ORTHO04x5M002551 6.3e-84 313.9 406 48.5
LP013033 Lolium perenne HOM04x5M002412 ORTHO04x5M002551 1.7e-81 305.8 367 48.2
Sspon.06G0001760-1A Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 1.9e-80 302.4 325 54.8
Zm00001d052895 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 9.5e-80 300.1 400 50.0
Misin13G182100 Miscanthus sinensis HOM04x5M002412 ORTHO04x5M002551 1.2e-79 299.7 322 55.3
Sspon.06G0001760-4D Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 2.8e-79 298.5 323 54.2
Zm00007a00029929 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 1.0e-78 296.6 400 49.8
Sspon.06G0001760-2B Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 1.4e-78 296.2 323 53.9
Sobic.007G209400 Sorghum bicolor HOM04x5M002412 ORTHO04x5M002551 1.8e-78 295.8 315 55.9
Sspon.06G0001760-3C Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 5.2e-78 294.3 396 47.5
LOC_Os08g39990 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 2.4e-75 285.4 401 45.6
Bradi3g40070 Brachypodium distachyon HOM04x5M002412 ORTHO04x5M002551 3.2e-75 285.0 387 47.0
Seita.2G254800 Setaria italica HOM04x5M002412 ORTHO04x5M002551 7.0e-75 283.9 229 66.8
OsR498G0816446400.01 Oryza sativa ssp. indica HOM04x5M002412 ORTHO04x5M002551 9.5e-72 273.5 280 55.7
Zjn_sc00015.1.g05520.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 2.8e-71 271.9 393 46.3
Oropetium_20150105_05499 Oropetium thomaeum HOM04x5M002412 ORTHO04x5M002551 8.9e-70 266.9 248 64.1
OB09G21400 Oryza brachyantha HOM04x5M002412 ORTHO04x5M002551 1.5e-69 266.2 379 47.8
Pgl_GLEAN_10009994 Cenchrus americanus HOM04x5M002412 ORTHO04x5M002551 4.9e-68 261.2 179 76.0
Zm00008a018045 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 2.7e-66 255.4 395 46.1
p5.00_sc00037_p0128 Elaeis guineensis HOM04x5M002412 ORTHO04x5M002551 5.6e-64 247.7 388 42.5
CALSI_Maker00035014 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 3.6e-63 245.0 319 47.0
CALSI_Maker00024525 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 3.6e-63 245.0 319 47.0
CALSI_Maker00032976 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 2.2e-60 235.7 384 41.4
Aco000750 Ananas comosus HOM04x5M002412 ORTHO04x5M002551 5.1e-57 224.6 273 46.9
Spipo12G0038000 Spirodela polyrhiza HOM04x5M002412 ORTHO04x5M002551 2.5e-56 222.2 337 40.1
Ma06_g38250 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 3.3e-56 221.9 323 44.3
Ma09_g12010 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 5.2e-54 214.5 295 47.5
Ma08_g25090 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 6.8e-54 214.2 317 41.3
Spipo0G0076700 Spirodela polyrhiza HOM04x5M002412 ORTHO04x5M002551 5.8e-53 211.1 309 41.4
Ma05_g24710 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 9.9e-53 210.3 339 39.5
p5.00_sc00131_p0014 Elaeis guineensis HOM04x5M002412 ORTHO04x5M002551 2.9e-52 208.8 381 38.8
PEQU_14985 Phalaenopsis equestris HOM04x5M002412 ORTHO04x5M002551 2.7e-50 202.2 388 37.4
Aco018516 Ananas comosus HOM04x5M002412 ORTHO04x5M002551 2.3e-49 199.1 328 40.5
Potri.006G191800 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 6.9e-46 187.6 377 34.5
Potri.T110800 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 7.6e-45 184.1 321 37.7
Potri.016G046900 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 2.9e-44 182.2 321 37.4
AT3G57990 Arabidopsis thaliana HOM04x5M002412 ORTHO04x5M002551 1.1e-43 180.3 316 36.1
ATR0605G156 Amborella trichopoda HOM04x5M002412 ORTHO04x5M002551 3.2e-43 178.7 370 34.3
Ma04_g25960 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 4.2e-43 178.3 383 35.8
Solyc10g080470.1 Solanum lycopersicum HOM04x5M002412 ORTHO04x5M002551 5.4e-43 177.9 321 36.8
Zosma45g00520 Zostera marina HOM04x5M002412 ORTHO04x5M002551 1.6e-42 176.4 381 34.6
GSVIVG01033512001 Vitis vinifera HOM04x5M002412 ORTHO04x5M002551 5.8e-37 157.9 233 41.6
ATR0049G071 Amborella trichopoda HOM04x5M002412 ORTHO04x5M002551 7.6e-37 157.5 370 30.5
PH01000770G0030 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 3.8e-36 155.2 245 46.5
HORVU7Hr1G050870 Hordeum vulgare HOM04x5M002412 ORTHO04x5M002551 8.4e-36 154.1 240 45.0
PH01001286G0020 Phyllostachys edulis HOM04x5M002412 ORTHO04x5M002767 3.2e-35 152.1 249 43.4
PAB00042622 Picea abies HOM04x5M002412 ORTHO04x5M002551 2.5e-32 142.5 371 32.9
Zosma221g00080 Zostera marina HOM04x5M002412 ORTHO04x5M002551 1.2e-29 133.7 279 34.8
Pp3c26_2720 Physcomitrium patens HOM04x5M002412 ORTHO04x5M002551 1.0e-25 120.6 115 52.2
Mapoly0061s0112 Marchantia polymorpha HOM04x5M002412 ORTHO04x5M002551 1.3e-25 120.2 122 47.5
Pp3c4_23000 Physcomitrium patens HOM04x5M002412 ORTHO04x5M002551 8.7e-25 117.5 116 49.1
gene10433 Selaginella moellendorffii HOM04x5M002412 ORTHO04x5M002551 4.3e-24 115.2 345 28.7
TRITD5Bv1G106560 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 8.2e-23 110.9 268 31.7
HORVU5Hr1G053060 Hordeum vulgare HOM04x5M002412 ORTHO04x5M002551 3.1e-22 109.0 312 30.4
TraesCS5B02G170300 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 3.1e-22 109.0 268 31.7
p5.00_sc00002_p0114 Elaeis guineensis HOM04x5M002412 ORTHO04x5M002551 9.0e-22 107.5 319 30.7
Spipo5G0060300 Spirodela polyrhiza HOM04x5M002412 ORTHO04x5M002551 1.0e-20 104.0 330 29.1
TraesCS5D02G177400 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.0e-20 104.0 285 30.2
TraesCS5A02G172900 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 5.0e-20 101.7 268 30.6
CALSI_Maker00040825 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 5.5e-19 98.2 102 48.0
Potri.003G088500 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 1.3e-17 93.6 343 26.8
LOC_Os04g48600 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 7.4e-16 87.8 59 74.6
Pgl_GLEAN_10002438 Cenchrus americanus HOM04x5M002412 ORTHO04x5M002551 1.1e-14 84.0 152 41.4
Potri.001G145400 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 1.4e-14 83.6 359 25.6
evm.TU.AsparagusV1_04.1736.V1.1 Asparagus officinalis HOM04x5M002412 ORTHO04x5M002551 2.9e-12 75.9 255 30.2
GSVIVG01013169001 Vitis vinifera HOM04x5M002412 ORTHO04x5M002551 1.9e-11 73.2 337 24.0
LOC_Os09g10690 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 2.5e-11 72.8 253 26.9
OsR498G0916902900.01 Oryza sativa ssp. indica HOM04x5M002412 ORTHO04x5M002551 2.5e-11 72.8 253 26.9
LOC_Os11g38450 Oryza sativa ssp. japonica HOM04x5M006374 ORTHO04x5M007929 9.4e-11 70.9 48 70.8
PH01001791G0500 Phyllostachys edulis HOM04x5M002412 ORTHO04x5M002551 4.6e-10 68.6 122 36.1
LOC_Os06g30960 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M129426 8.2e-07 57.8 62 51.6

Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (3 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (5 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (6 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (1 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (9 genes)
Triticum turgidum (5 genes)
Vitis vinifera (2 genes)
Zea mays B73 (5 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (4 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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