Interactive Phylogenetics Module

Gene Id
Zm00001d002462

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d002463 Zea mays B73 HOM04x5M002206 ORTHO04x5M002558 1.5e-140 501.5 254 100.0
Zm00001d002462 Zea mays B73 HOM04x5M002206 ORTHO04x5M002558 1.5e-140 501.5 254 100.0
Zm00001d028622 Zea mays B73 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Zm00001d004839 Zea mays B73 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Zm00001d003683 Zea mays B73 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Zm00001d004841 Zea mays B73 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Zm00001d003680 Zea mays B73 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Zm00007a00033030 Zea mays B104 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Zm00007a00034301 Zea mays B104 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Zm00007a00008944 Zea mays B104 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Zm00007a00040374 Zea mays B104 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Zm00007a00021855 Zea mays B104 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Zm00008a008221 Zea mays PH207 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Zm00008a007375 Zea mays PH207 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Zm00008a008218 Zea mays PH207 HOM04x5M002206 ORTHO04x5M002558 5.9e-129 463.0 238 95.8
Oropetium_20150105_14948 Oropetium thomaeum HOM04x5M002206 ORTHO04x5M002558 2.9e-128 460.7 238 95.0
Seita.8G046000 Setaria italica HOM04x5M002206 ORTHO04x5M002558 5.0e-128 459.9 238 94.5
Seita.7G290900 Setaria italica HOM04x5M002206 ORTHO04x5M002558 5.0e-128 459.9 238 97.5
Zjn_sc00028.1.g01580.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002206 ORTHO04x5M002558 6.5e-128 459.5 238 94.1
Zjn_sc00031.1.g01900.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002206 ORTHO04x5M002558 8.5e-128 459.1 238 93.7
Pgl_GLEAN_10027530 Cenchrus americanus HOM04x5M002206 ORTHO04x5M002558 1.9e-127 458.0 238 94.1
Zjn_sc00205.1.g00340.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002206 ORTHO04x5M002558 1.9e-127 458.0 238 93.3
Sspon.05G0018670-1A Saccharum spontaneum HOM04x5M002206 ORTHO04x5M002558 2.5e-127 457.6 238 94.1
Sspon.05G0018670-3C Saccharum spontaneum HOM04x5M002206 ORTHO04x5M002558 2.5e-127 457.6 238 94.1
Sspon.05G0018670-4D Saccharum spontaneum HOM04x5M002206 ORTHO04x5M002558 2.5e-127 457.6 238 94.1
Sspon.05G0018670-2B Saccharum spontaneum HOM04x5M002206 ORTHO04x5M002558 5.5e-127 456.4 238 93.7
LP009684 Lolium perenne HOM04x5M002206 ORTHO04x5M002558 7.2e-127 456.1 238 93.3
LOC_Os12g07010 Oryza sativa ssp. japonica HOM04x5M002206 ORTHO04x5M002558 7.2e-127 456.1 238 92.9
OsR498G1221014100.01 Oryza sativa ssp. indica HOM04x5M002206 ORTHO04x5M002558 7.2e-127 456.1 238 92.9
LOC_Os11g06750 Oryza sativa ssp. japonica HOM04x5M002206 ORTHO04x5M002558 1.6e-126 454.9 238 92.9
Sobic.005G050500 Sorghum bicolor HOM04x5M002206 ORTHO04x5M002558 1.6e-126 454.9 238 93.3
HORVU4Hr1G019980 Hordeum vulgare HOM04x5M002206 ORTHO04x5M002558 2.1e-126 454.5 238 92.0
TraesCS4D02G109200 Triticum aestivum HOM04x5M002206 ORTHO04x5M002558 2.1e-126 454.5 238 92.0
TraesCS4A02G208000 Triticum aestivum HOM04x5M002206 ORTHO04x5M002558 2.1e-126 454.5 238 92.0
TraesCS4B02G111500 Triticum aestivum HOM04x5M002206 ORTHO04x5M002558 2.1e-126 454.5 238 92.0
TRITD4Bv1G043630 Triticum turgidum HOM04x5M002206 ORTHO04x5M002558 2.1e-126 454.5 238 92.0
Bradi4g24610 Brachypodium distachyon HOM04x5M002206 ORTHO04x5M002558 2.7e-126 454.1 238 92.9
OB11G13520 Oryza brachyantha HOM04x5M002206 ORTHO04x5M002558 2.7e-126 454.1 238 92.9
Pgl_GLEAN_10038268 Cenchrus americanus HOM04x5M002206 ORTHO04x5M002558 4.6e-126 453.4 238 95.8
Misin12G204100 Miscanthus sinensis HOM04x5M002206 ORTHO04x5M002558 4.6e-126 453.4 238 96.2
OB12G14050 Oryza brachyantha HOM04x5M002206 ORTHO04x5M002558 4.6e-126 453.4 238 92.4
Sspon.05G0003860-1A Saccharum spontaneum HOM04x5M002206 ORTHO04x5M002558 4.6e-126 453.4 238 96.2
Sspon.05G0003860-2B Saccharum spontaneum HOM04x5M002206 ORTHO04x5M002558 4.6e-126 453.4 238 96.2
Sspon.05G0003860-3D Saccharum spontaneum HOM04x5M002206 ORTHO04x5M002558 4.6e-126 453.4 238 96.2
Misin11G213600 Miscanthus sinensis HOM04x5M002206 ORTHO04x5M002558 6.1e-126 453.0 238 95.8
Misin09G029300 Miscanthus sinensis HOM04x5M002206 ORTHO04x5M002558 7.9e-126 452.6 238 95.4
LP022057 Lolium perenne HOM04x5M002206 ORTHO04x5M002558 1.0e-125 452.2 238 91.6
HORVU5Hr1G036630 Hordeum vulgare HOM04x5M002206 ORTHO04x5M002558 1.3e-125 451.8 238 91.6
Bradi4g41680 Brachypodium distachyon HOM04x5M002206 ORTHO04x5M002558 2.3e-125 451.1 238 91.6
TraesCS5B02G118400 Triticum aestivum HOM04x5M002206 ORTHO04x5M002558 2.3e-125 451.1 238 90.3
TRITD5Bv1G069610 Triticum turgidum HOM04x5M002206 ORTHO04x5M002558 2.3e-125 451.1 238 90.3
Misin10G037600 Miscanthus sinensis HOM04x5M002206 ORTHO04x5M002558 3.9e-125 450.3 238 95.4
TraesCS5D02G129200 Triticum aestivum HOM04x5M002206 ORTHO04x5M002558 3.9e-125 450.3 238 90.3
TraesCS5A02G112400 Triticum aestivum HOM04x5M002206 ORTHO04x5M002558 5.1e-125 449.9 238 89.9
Zm00007a00038628 Zea mays B104 HOM04x5M002206 ORTHO04x5M002558 4.8e-123 443.4 223 99.6
Zm00007a00048646 Zea mays B104 HOM04x5M002206 ORTHO04x5M005356 4.8e-123 443.4 223 99.6
PEQU_03265 Phalaenopsis equestris HOM04x5M002206 ORTHO04x5M002558 2.6e-121 437.6 238 88.2
evm.TU.AsparagusV1_10.1806.V1.1 Asparagus officinalis HOM04x5M002206 ORTHO04x5M002558 3.4e-121 437.2 238 87.8
Aco018227 Ananas comosus HOM04x5M002206 ORTHO04x5M002558 5.9e-121 436.4 238 87.8
Ma11_g08620 Musa acuminata HOM04x5M002206 ORTHO04x5M002558 5.9e-121 436.4 238 87.8
evm.TU.AsparagusV1_04.382.V1.1 Asparagus officinalis HOM04x5M002206 ORTHO04x5M002558 7.7e-121 436.0 238 87.4
Ma00_g03400 Musa acuminata HOM04x5M002206 ORTHO04x5M002558 7.7e-121 436.0 238 87.4
ASH_gene15976 Apostasia shenzhenica HOM04x5M002206 ORTHO04x5M002558 1.3e-120 435.3 238 86.1
CALSI_Maker00016161 Calamus simplicifolius HOM04x5M002206 ORTHO04x5M002558 1.7e-120 434.9 238 87.4
Ma07_g03230 Musa acuminata HOM04x5M002206 ORTHO04x5M002558 1.7e-120 434.9 238 86.1
PEQU_01484 Phalaenopsis equestris HOM04x5M002206 ORTHO04x5M002558 2.9e-120 434.1 238 86.6
GSVIVG01034555001 Vitis vinifera HOM04x5M002206 ORTHO04x5M002558 3.8e-120 433.7 238 87.4
Ma05_g01000 Musa acuminata HOM04x5M002206 ORTHO04x5M002558 1.4e-119 431.8 238 87.0
Ma05_g01250 Musa acuminata HOM04x5M002206 ORTHO04x5M002558 1.9e-119 431.4 238 86.6
Potri.005G194500 Populus trichocarpa HOM04x5M002206 ORTHO04x5M002558 2.5e-119 431.0 238 86.1
ATR0753G037 Amborella trichopoda HOM04x5M002206 ORTHO04x5M002558 3.2e-119 430.6 238 85.3
ATR0022G057 Amborella trichopoda HOM04x5M002206 ORTHO04x5M002558 7.2e-119 429.5 238 84.9
Aco011284 Ananas comosus HOM04x5M002206 ORTHO04x5M002558 1.2e-118 428.7 238 84.9
Spipo9G0005300 Spirodela polyrhiza HOM04x5M002206 ORTHO04x5M002558 2.1e-118 427.9 238 84.5
GSVIVG01023241001 Vitis vinifera HOM04x5M002206 ORTHO04x5M002558 3.6e-118 427.2 238 84.9
evm.TU.AsparagusV1_10.982.V1.1 Asparagus officinalis HOM04x5M002206 ORTHO04x5M002558 4.7e-118 426.8 238 84.5
Potri.002G066200 Populus trichocarpa HOM04x5M002206 ORTHO04x5M002558 4.7e-118 426.8 238 85.7
PAB00012230 Picea abies HOM04x5M002206 ORTHO04x5M002558 1.8e-117 424.9 238 85.3
CALSI_Maker00012118 Calamus simplicifolius HOM04x5M002206 ORTHO04x5M002558 3.0e-117 424.1 238 83.6
Solyc01g104590.2 Solanum lycopersicum HOM04x5M002206 ORTHO04x5M002558 3.0e-117 424.1 238 86.6
ATR0665G587 Amborella trichopoda HOM04x5M002206 ORTHO04x5M002558 5.1e-117 423.3 238 84.0
Zosma177g00280 Zostera marina HOM04x5M002206 ORTHO04x5M002558 4.4e-116 420.2 238 84.0
Potri.003G008300 Populus trichocarpa HOM04x5M002206 ORTHO04x5M002558 1.3e-115 418.7 238 82.8
Potri.003G007700 Populus trichocarpa HOM04x5M002206 ORTHO04x5M002558 1.3e-115 418.7 238 82.8
Solyc01g103510.2 Solanum lycopersicum HOM04x5M002206 ORTHO04x5M002558 3.7e-115 417.2 238 83.2
Zosma462g00070 Zostera marina HOM04x5M002206 ORTHO04x5M002558 3.1e-114 414.1 238 82.8
AT1G43170 Arabidopsis thaliana HOM04x5M002206 ORTHO04x5M002558 9.1e-114 412.5 235 82.6
AT1G61580 Arabidopsis thaliana HOM04x5M002206 ORTHO04x5M002558 1.4e-111 405.2 234 82.9
Mapoly0001s0237 Marchantia polymorpha HOM04x5M002206 ORTHO04x5M002558 2.1e-110 401.4 238 81.5
PAB00020811 Picea abies HOM04x5M002206 ORTHO04x5M002558 8.0e-110 399.4 228 82.9
gene9242 Selaginella moellendorffii HOM04x5M002206 ORTHO04x5M002558 1.1e-108 395.6 238 78.2
gene17677 Selaginella moellendorffii HOM04x5M002206 ORTHO04x5M002558 1.1e-108 395.6 238 78.2
Pp3c10_25460 Physcomitrium patens HOM04x5M002206 ORTHO04x5M002558 3.1e-106 387.5 238 79.8
Pp3c5_27000 Physcomitrium patens HOM04x5M002206 ORTHO04x5M002558 1.6e-105 385.2 237 79.7
Pp3c5_27030 Physcomitrium patens HOM04x5M002206 ORTHO04x5M002558 1.6e-105 385.2 237 79.7
Pp3c6_2960 Physcomitrium patens HOM04x5M002206 ORTHO04x5M002558 1.0e-104 382.5 238 78.6
MCO01G195 Micromonas commoda HOM04x5M002206 ORTHO04x5M002558 1.6e-102 375.2 239 74.5
Cre10.g417700 Chlamydomonas reinhardtii HOM04x5M002206 ORTHO04x5M002558 1.1e-95 352.4 239 71.5
Zm00008a006414 Zea mays PH207 HOM04x5M002206 ORTHO04x5M002558 2.3e-85 318.2 186 88.7
CALSI_Maker00037352 Calamus simplicifolius HOM04x5M002206 ORTHO04x5M002558 9.2e-82 306.2 238 66.0
Sobic.006G216600 Sorghum bicolor HOM04x5M002206 ORTHO04x5M002558 1.2e-76 289.3 152 93.4
Spipo2G0011300 Spirodela polyrhiza HOM04x5M002206 ORTHO04x5M002558 3.0e-72 274.6 153 85.0
TRITD5Av1G077310 Triticum turgidum HOM04x5M002206 ORTHO04x5M002558 8.0e-70 266.5 237 60.8
Zm00008a001089 Zea mays PH207 HOM04x5M002206 ORTHO04x5M002558 5.2e-69 263.8 158 84.2
PH01002363G0020 Phyllostachys edulis HOM04x5M002206 ORTHO04x5M002558 1.2e-68 262.7 189 70.4
Zm00008a007374 Zea mays PH207 HOM04x5M002206 ORTHO04x5M002558 7.8e-65 250.0 128 93.8
Zm00008a006281 Zea mays PH207 HOM04x5M002206 ORTHO04x5M258530 3.3e-47 191.4 225 54.2
GSVIVG01022284001 Vitis vinifera HOM04x5M002206 ORTHO04x5M023695 3.1e-37 158.3 86 84.9
CALSI_Maker00009347 Calamus simplicifolius HOM04x5M002206 ORTHO04x5M023695 6.4e-35 150.6 80 86.2
TRITD4Av1G160630 Triticum turgidum HOM04x5M002206 ORTHO04x5M002558 1.1e-15 86.7 44 95.5
Zm00007a00035740 Zea mays B104 HOM04x5M002206 ORTHO04x5M252936 2.6e-12 75.5 67 64.2
Ma06_g20940 Musa acuminata HOM04x5M002206 ORTHO04x5M093246 1.0e-08 63.5 172 33.1

Amborella trichopoda (3 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (0 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (6 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (4 genes)
Picea abies (2 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (7 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (2 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (6 genes)
Triticum turgidum (4 genes)
Vitis vinifera (3 genes)
Zea mays B73 (7 genes)
Zea mays B104 (8 genes)
Zea mays PH207 (7 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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