Interactive Phylogenetics Module

Gene Id
Zjn_sc00009.1.g11850.1.sm.mkhc

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zjn_sc00009.1.g11850.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M000731 ORTHO04x5M001634 9.2e-117 422.2 204 100.0
OB01G40020 Oryza brachyantha HOM04x5M000731 ORTHO04x5M001634 4.3e-98 360.1 178 96.6
LOC_Os01g54870 Oryza sativa ssp. japonica HOM04x5M000731 ORTHO04x5M001634 4.3e-98 360.1 178 96.6
OsR498G0102007200.01 Oryza sativa ssp. indica HOM04x5M000731 ORTHO04x5M001634 4.3e-98 360.1 178 96.6
Zjn_sc00029.1.g06190.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M000731 ORTHO04x5M001634 1.2e-97 358.6 174 97.7
Oropetium_20150105_12525 Oropetium thomaeum HOM04x5M000731 ORTHO04x5M001634 1.8e-96 354.8 172 97.7
Bradi2g50020 Brachypodium distachyon HOM04x5M000731 ORTHO04x5M001634 5.2e-96 353.2 178 93.8
LP016629 Lolium perenne HOM04x5M000731 ORTHO04x5M001634 5.2e-96 353.2 178 93.8
LOC_Os05g49030 Oryza sativa ssp. japonica HOM04x5M000731 ORTHO04x5M001634 5.2e-96 353.2 178 94.4
OsR498G0511350900.01 Oryza sativa ssp. indica HOM04x5M000731 ORTHO04x5M001634 5.2e-96 353.2 178 94.4
Misin16G229800 Miscanthus sinensis HOM04x5M000731 ORTHO04x5M001634 9.0e-96 352.4 178 93.8
Misin17G242600 Miscanthus sinensis HOM04x5M000731 ORTHO04x5M001634 9.0e-96 352.4 178 93.8
PH01000298G0330 Phyllostachys edulis HOM04x5M000731 ORTHO04x5M001634 9.0e-96 352.4 178 94.4
Sobic.009G233400 Sorghum bicolor HOM04x5M000731 ORTHO04x5M001634 9.0e-96 352.4 178 93.8
Sspon.07G0002090-1A Saccharum spontaneum HOM04x5M000731 ORTHO04x5M001634 9.0e-96 352.4 178 93.8
Sspon.07G0002090-2C Saccharum spontaneum HOM04x5M000731 ORTHO04x5M001634 9.0e-96 352.4 178 93.8
Zm00001d009579 Zea mays B73 HOM04x5M000731 ORTHO04x5M001634 9.0e-96 352.4 178 93.3
Zm00007a00040124 Zea mays B104 HOM04x5M000731 ORTHO04x5M001634 9.0e-96 352.4 178 93.3
Zm00008a030788 Zea mays PH207 HOM04x5M000731 ORTHO04x5M001634 9.0e-96 352.4 178 93.3
Misin06G222700 Miscanthus sinensis HOM04x5M000731 ORTHO04x5M001634 1.2e-95 352.1 178 93.3
Sobic.003G249700 Sorghum bicolor HOM04x5M000731 ORTHO04x5M001634 1.2e-95 352.1 178 93.3
Sspon.03G0009390-1A Saccharum spontaneum HOM04x5M000731 ORTHO04x5M001634 1.2e-95 352.1 178 93.3
Sspon.03G0009390-1P Saccharum spontaneum HOM04x5M000731 ORTHO04x5M001634 1.2e-95 352.1 178 93.3
Sspon.03G0009390-2B Saccharum spontaneum HOM04x5M000731 ORTHO04x5M001634 1.2e-95 352.1 178 93.3
Zm00001d043942 Zea mays B73 HOM04x5M000731 ORTHO04x5M001634 1.2e-95 352.1 178 93.3
Zm00007a00042339 Zea mays B104 HOM04x5M000731 ORTHO04x5M001634 1.2e-95 352.1 178 93.3
Zm00008a014208 Zea mays PH207 HOM04x5M000731 ORTHO04x5M001634 1.2e-95 352.1 178 93.3
PH01000018G0750 Phyllostachys edulis HOM04x5M000731 ORTHO04x5M001634 1.5e-95 351.7 178 93.8
Oropetium_20150105_03874 Oropetium thomaeum HOM04x5M000731 ORTHO04x5M001634 2.6e-95 350.9 178 92.7
Seita.3G145500 Setaria italica HOM04x5M000731 ORTHO04x5M001634 2.6e-95 350.9 178 93.8
Zm00008a026452 Zea mays PH207 HOM04x5M000731 ORTHO04x5M001634 2.6e-95 350.9 178 93.3
LOC_Os01g47660 Oryza sativa ssp. japonica HOM04x5M000731 ORTHO04x5M001634 5.8e-95 349.7 178 93.3
OsR498G0101717400.01 Oryza sativa ssp. indica HOM04x5M000731 ORTHO04x5M001634 5.8e-95 349.7 178 93.3
Zm00001d039020 Zea mays B73 HOM04x5M000731 ORTHO04x5M001634 5.8e-95 349.7 178 92.7
Zm00007a00003792 Zea mays B104 HOM04x5M000731 ORTHO04x5M001634 5.8e-95 349.7 178 92.7
Zjn_sc00147.1.g00510.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M000731 ORTHO04x5M001634 9.9e-95 349.0 178 93.3
Zm00001d011534 Zea mays B73 HOM04x5M000731 ORTHO04x5M001634 9.9e-95 349.0 178 92.1
Zm00007a00018319 Zea mays B104 HOM04x5M000731 ORTHO04x5M001634 9.9e-95 349.0 178 92.1
Zm00008a032224 Zea mays PH207 HOM04x5M000731 ORTHO04x5M001634 9.9e-95 349.0 178 92.1
PH01002164G0290 Phyllostachys edulis HOM04x5M000731 ORTHO04x5M001634 1.3e-94 348.6 178 93.3
Sspon.05G0016740-1A Saccharum spontaneum HOM04x5M000731 ORTHO04x5M001634 1.3e-94 348.6 178 92.7
Seita.5G262600 Setaria italica HOM04x5M000731 ORTHO04x5M001634 1.7e-94 348.2 178 92.7
Misin09G092100 Miscanthus sinensis HOM04x5M000731 ORTHO04x5M001634 2.9e-94 347.4 178 93.3
Misin05G222400 Miscanthus sinensis HOM04x5M000731 ORTHO04x5M001634 3.8e-94 347.1 178 92.1
Bradi2g46010 Brachypodium distachyon HOM04x5M000731 ORTHO04x5M001634 4.9e-94 346.7 178 92.7
Misin10G072500 Miscanthus sinensis HOM04x5M000731 ORTHO04x5M001634 4.9e-94 346.7 178 92.1
Sobic.005G091700 Sorghum bicolor HOM04x5M000731 ORTHO04x5M001634 4.9e-94 346.7 178 92.1
Seita.8G085600 Setaria italica HOM04x5M000731 ORTHO04x5M001634 4.9e-94 346.7 178 92.1
Zjn_sc00029.1.g01420.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M000731 ORTHO04x5M001634 4.9e-94 346.7 175 94.3
Sspon.05G0016740-3C Saccharum spontaneum HOM04x5M000731 ORTHO04x5M001634 1.4e-93 345.1 178 92.1
OB01G34970 Oryza brachyantha HOM04x5M000731 ORTHO04x5M001634 1.9e-93 344.7 176 93.2
OB05G33450 Oryza brachyantha HOM04x5M000731 ORTHO04x5M001634 2.4e-93 344.4 176 93.2
Bradi2g16430 Brachypodium distachyon HOM04x5M000731 ORTHO04x5M001634 3.2e-93 344.0 178 91.6
HORVU3Hr1G060800 Hordeum vulgare HOM04x5M000731 ORTHO04x5M001634 4.2e-93 343.6 178 91.6
TraesCS3B02G271800 Triticum aestivum HOM04x5M000731 ORTHO04x5M001634 4.2e-93 343.6 178 91.6
TraesCS3D02G243800 Triticum aestivum HOM04x5M000731 ORTHO04x5M001634 4.2e-93 343.6 178 91.6
TraesCS3A02G247600 Triticum aestivum HOM04x5M000731 ORTHO04x5M001634 4.2e-93 343.6 178 91.6
TRITD3Bv1G141600 Triticum turgidum HOM04x5M000731 ORTHO04x5M001634 4.2e-93 343.6 178 91.6
TRITD3Av1G166220 Triticum turgidum HOM04x5M000731 ORTHO04x5M001634 4.2e-93 343.6 178 91.6
LP008404 Lolium perenne HOM04x5M000731 ORTHO04x5M001634 5.4e-93 343.2 178 90.4
Pgl_GLEAN_10013711 Cenchrus americanus HOM04x5M000731 ORTHO04x5M001634 2.1e-92 341.3 178 91.6
TraesCS1D02G407500 Triticum aestivum HOM04x5M000731 ORTHO04x5M001634 2.7e-92 340.9 178 91.0
TraesCS1A02G399800 Triticum aestivum HOM04x5M000731 ORTHO04x5M001634 2.7e-92 340.9 178 91.0
TRITD1Av1G210460 Triticum turgidum HOM04x5M000731 ORTHO04x5M001634 2.7e-92 340.9 178 91.0
TRITD1Bv1G213890 Triticum turgidum HOM04x5M000731 ORTHO04x5M001634 2.7e-92 340.9 178 91.0
Pgl_GLEAN_10014010 Cenchrus americanus HOM04x5M000731 ORTHO04x5M001634 3.5e-92 340.5 178 91.0
HORVU1Hr1G088040 Hordeum vulgare HOM04x5M000731 ORTHO04x5M001634 3.5e-92 340.5 179 89.9
Pgl_GLEAN_10009647 Cenchrus americanus HOM04x5M000731 ORTHO04x5M001634 6.0e-92 339.7 176 93.2
TraesCS1B02G427900 Triticum aestivum HOM04x5M000731 ORTHO04x5M001634 1.0e-91 339.0 178 90.4
LP002922 Lolium perenne HOM04x5M000731 ORTHO04x5M001634 1.7e-91 338.2 178 89.9
PAB00020229 Picea abies HOM04x5M000731 ORTHO04x5M001634 2.3e-91 337.8 178 91.0
Potri.011G072400 Populus trichocarpa HOM04x5M000731 ORTHO04x5M001634 5.1e-91 336.7 178 89.3
Potri.004G063300 Populus trichocarpa HOM04x5M000731 ORTHO04x5M001634 2.5e-90 334.3 178 88.8
ATR0693G218 Amborella trichopoda HOM04x5M000731 ORTHO04x5M001634 3.3e-90 334.0 178 88.8
Potri.004G063400 Populus trichocarpa HOM04x5M000731 ORTHO04x5M001634 3.3e-90 334.0 178 88.8
GSVIVG01021430001 Vitis vinifera HOM04x5M000731 ORTHO04x5M001634 3.3e-90 334.0 178 88.2
Potri.002G057600 Populus trichocarpa HOM04x5M000731 ORTHO04x5M001634 7.3e-90 332.8 178 88.2
evm.TU.AsparagusV1_01.772.V1.1 Asparagus officinalis HOM04x5M000731 ORTHO04x5M001634 2.8e-89 330.9 175 89.1
ASH_gene7966 Apostasia shenzhenica HOM04x5M000731 ORTHO04x5M001634 3.6e-89 330.5 178 88.8
Solyc02g070640.2 Solanum lycopersicum HOM04x5M000731 ORTHO04x5M001634 4.8e-89 330.1 178 87.6
Solyc02g070650.2 Solanum lycopersicum HOM04x5M000731 ORTHO04x5M001634 4.8e-89 330.1 178 87.6
evm.TU.AsparagusV1_04.209.V1.1 Asparagus officinalis HOM04x5M000731 ORTHO04x5M001634 8.1e-89 329.3 177 87.0
Oropetium_20150105_11669 Oropetium thomaeum HOM04x5M000731 ORTHO04x5M001634 1.8e-88 328.2 170 91.2
GSVIVG01000485001 Vitis vinifera HOM04x5M000731 ORTHO04x5M001634 1.8e-88 328.2 178 87.1
Aco005330 Ananas comosus HOM04x5M000731 ORTHO04x5M001634 9.0e-88 325.9 178 87.6
Ma03_g32530 Musa acuminata HOM04x5M000731 ORTHO04x5M001634 1.2e-87 325.5 178 86.5
Spipo1G0011100 Spirodela polyrhiza HOM04x5M000731 ORTHO04x5M001634 2.0e-87 324.7 173 89.6
Aco010155 Ananas comosus HOM04x5M000731 ORTHO04x5M001634 2.6e-87 324.3 178 87.1
Ma02_g10930 Musa acuminata HOM04x5M000731 ORTHO04x5M001634 2.6e-87 324.3 178 86.5
PEQU_25091 Phalaenopsis equestris HOM04x5M000731 ORTHO04x5M001634 2.6e-87 324.3 175 87.4
AT2G34480 Arabidopsis thaliana HOM04x5M000731 ORTHO04x5M001634 3.4e-87 323.9 178 87.1
Ma06_g28790 Musa acuminata HOM04x5M000731 ORTHO04x5M001634 5.8e-87 323.2 178 86.0
Solyc06g065590.2 Solanum lycopersicum HOM04x5M000731 ORTHO04x5M001634 5.8e-87 323.2 178 86.0
Ma07_g06810 Musa acuminata HOM04x5M000731 ORTHO04x5M001634 1.7e-86 321.6 177 85.9
Solyc08g016180.2 Solanum lycopersicum HOM04x5M000731 ORTHO04x5M001634 2.2e-86 321.2 178 85.4
Aco006753 Ananas comosus HOM04x5M000731 ORTHO04x5M001634 2.9e-86 320.9 178 86.5
p5.00_sc00076_p0097 Elaeis guineensis HOM04x5M000731 ORTHO04x5M001634 2.9e-86 320.9 178 85.4
AT3G14600 Arabidopsis thaliana HOM04x5M000731 ORTHO04x5M001634 6.4e-86 319.7 175 86.9
CALSI_Maker00047894 Calamus simplicifolius HOM04x5M000731 ORTHO04x5M001634 6.4e-86 319.7 178 84.8
p5.00_sc00254_p0016 Elaeis guineensis HOM04x5M000731 ORTHO04x5M001634 8.4e-86 319.3 176 85.8
p5.00_sc00017_p0285 Elaeis guineensis HOM04x5M000731 ORTHO04x5M001634 1.1e-85 318.9 178 84.3
Ma01_g10140 Musa acuminata HOM04x5M000731 ORTHO04x5M001634 1.1e-85 318.9 177 84.7
Mapoly0001s0112 Marchantia polymorpha HOM04x5M000731 ORTHO04x5M001634 1.1e-85 318.9 177 85.3
p5.00_sc00065_p0010 Elaeis guineensis HOM04x5M000731 ORTHO04x5M001634 1.4e-85 318.5 178 83.7
CALSI_Maker00042401 Calamus simplicifolius HOM04x5M000731 ORTHO04x5M001634 1.9e-85 318.2 175 85.7
Spipo11G0061200 Spirodela polyrhiza HOM04x5M000731 ORTHO04x5M001634 1.9e-85 318.2 193 81.3
AT1G29965 Arabidopsis thaliana HOM04x5M000731 ORTHO04x5M001634 2.4e-85 317.8 178 86.0
AT1G29970 Arabidopsis thaliana HOM04x5M000731 ORTHO04x5M001634 1.6e-84 315.1 172 87.8
CALSI_Maker00046801 Calamus simplicifolius HOM04x5M000731 ORTHO04x5M001634 1.6e-84 315.1 174 85.6
CALSI_Maker00021353 Calamus simplicifolius HOM04x5M000731 ORTHO04x5M001634 1.6e-84 315.1 174 85.6
Zosma24g00400 Zostera marina HOM04x5M000731 ORTHO04x5M001634 8.7e-83 309.3 177 82.5
Zosma60g00580 Zostera marina HOM04x5M000731 ORTHO04x5M001634 1.3e-81 305.4 177 81.9
gene998 Selaginella moellendorffii HOM04x5M000731 ORTHO04x5M001634 2.1e-81 304.7 174 82.8
gene7573 Selaginella moellendorffii HOM04x5M000731 ORTHO04x5M001634 2.1e-81 304.7 174 82.8
Pp3c3_11250 Physcomitrium patens HOM04x5M000731 ORTHO04x5M001634 3.7e-81 303.9 177 81.4
Pp3c8_13880 Physcomitrium patens HOM04x5M000731 ORTHO04x5M001634 3.7e-81 303.9 177 81.4
Sspon.03G0009390-4D Saccharum spontaneum HOM04x5M000731 ORTHO04x5M003808 8.1e-81 302.8 155 91.6
Pp3c24_18790 Physcomitrium patens HOM04x5M000731 ORTHO04x5M001634 1.1e-80 302.4 177 80.8
Pp3c13_12320 Physcomitrium patens HOM04x5M000731 ORTHO04x5M001634 1.1e-80 302.4 177 80.8
Pp3c12_7770 Physcomitrium patens HOM04x5M000731 ORTHO04x5M001634 1.1e-80 302.4 177 80.8
Sspon.03G0009390-3C Saccharum spontaneum HOM04x5M000731 ORTHO04x5M001634 2.4e-80 301.2 153 92.2
Pp3c20_15150 Physcomitrium patens HOM04x5M000731 ORTHO04x5M001634 3.1e-80 300.8 175 81.1
Ma04_g25540 Musa acuminata HOM04x5M000731 ORTHO04x5M001634 4.5e-79 297.0 177 81.4
evm.TU.AsparagusV1_07.1999.V1.1 Asparagus officinalis HOM04x5M000731 ORTHO04x5M001634 1.1e-74 282.3 150 90.0
PH01000277G0430 Phyllostachys edulis HOM04x5M000731 ORTHO04x5M001634 1.3e-73 278.9 150 90.7
PEQU_13066 Phalaenopsis equestris HOM04x5M000731 ORTHO04x5M001634 5.3e-72 273.5 150 87.3
Sspon.03G0009390-2P Saccharum spontaneum HOM04x5M000731 ORTHO04x5M001634 5.5e-69 263.5 134 94.0
CALSI_Maker00012440 Calamus simplicifolius HOM04x5M000731 ORTHO04x5M001634 6.0e-68 260.0 163 77.9
Sspon.05G0016740-4D Saccharum spontaneum HOM04x5M000731 ORTHO04x5M001634 1.0e-67 259.2 134 93.3
Sspon.05G0016740-2B Saccharum spontaneum HOM04x5M000731 ORTHO04x5M001634 3.0e-67 257.7 134 92.5
Cre01.g047750 Chlamydomonas reinhardtii HOM04x5M000731 ORTHO04x5M001634 1.3e-65 252.3 175 66.9
ATR0661G549 Amborella trichopoda HOM04x5M000731 ORTHO04x5M001634 8.2e-65 249.6 134 89.6
TraesCS3A02G291200 Triticum aestivum HOM04x5M000731 ORTHO04x5M001634 3.0e-59 231.1 179 68.2
MCO07G499 Micromonas commoda HOM04x5M000731 ORTHO04x5M001634 1.2e-55 219.2 172 61.6
Solyc09g056380.1 Solanum lycopersicum HOM04x5M000731 ORTHO04x5M001634 4.5e-55 217.2 169 65.1
GSVIVG01021433001 Vitis vinifera HOM04x5M000731 ORTHO04x5M001634 1.4e-53 212.2 105 93.3
Aco021136 Ananas comosus HOM04x5M000731 ORTHO04x5M001634 1.0e-51 206.1 114 86.0
PH01000046G0520 Phyllostachys edulis HOM04x5M001679 ORTHO04x5M003923 1.9e-45 185.3 92 93.5
Zm00008a010044 Zea mays PH207 HOM04x5M000731 ORTHO04x5M022497 6.5e-38 160.2 152 57.2
Potri.T158801 Populus trichocarpa HOM04x5M000731 ORTHO04x5M001634 2.5e-37 158.3 87 86.2
Zm00001d007287 Zea mays B73 HOM04x5M000731 ORTHO04x5M022497 8.5e-30 133.3 128 55.5
PEQU_35658 Phalaenopsis equestris HOM04x5M000731 ORTHO04x5M027393 9.4e-29 129.8 66 89.4
Zm00007a00045490 Zea mays B104 HOM04x5M000731 ORTHO04x5M022695 4.7e-28 127.5 113 59.3
Zm00007a00051501 Zea mays B104 HOM04x5M000731 ORTHO04x5M022497 6.1e-28 127.1 88 69.3
PEQU_03664 Phalaenopsis equestris HOM04x5M000731 ORTHO04x5M001634 8.8e-27 123.2 71 81.7
TraesCS4D02G290700 Triticum aestivum HOM04x5M000731 ORTHO04x5M219354 2.0e-23 112.1 88 67.0
PEQU_40643 Phalaenopsis equestris HOM04x5M000731 ORTHO04x5M001634 1.5e-21 105.9 60 83.3
Zm00001d050199 Zea mays B73 HOM04x5M000731 ORTHO04x5M022695 2.5e-21 105.1 64 78.1
Zm00008a039740 Zea mays PH207 HOM04x5M000731 ORTHO04x5M022695 4.9e-17 90.9 74 63.5
PEQU_13961 Phalaenopsis equestris HOM04x5M001334 ORTHO04x5M002343 2.7e-15 85.1 65 61.5
ATR0661G184 Amborella trichopoda HOM04x5M000731 ORTHO04x5M054945 5.0e-14 80.9 45 77.8
LP009549 Lolium perenne HOM04x5M000731 ORTHO04x5M001287 2.8e-12 75.1 37 94.6

Amborella trichopoda (3 genes)
Ananas comosus (4 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (5 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (4 genes)
Hordeum vulgare (2 genes)
Lolium perenne (4 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (6 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (6 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (6 genes)
Picea abies (1 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (12 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (5 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (8 genes)
Triticum turgidum (4 genes)
Vitis vinifera (3 genes)
Zea mays B73 (6 genes)
Zea mays B104 (6 genes)
Zea mays PH207 (6 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

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