Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zjn_sc00007.1.g10190.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M003245 ORTHO04x5M005668 0.0e+00 1162.5 618 100.0
Seita.1G260300 Setaria italica HOM04x5M003245 ORTHO04x5M005668 1.3e-217 758.8 653 64.8
Misin08G230600 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 4.2e-205 717.2 686 62.1
Sspon.01G0000930-1P Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 1.9e-202 708.4 641 62.6
Oropetium_20150105_21240 Oropetium thomaeum HOM04x5M003245 ORTHO04x5M005668 1.8e-176 622.1 457 73.1
PH01003305G0030 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 2.5e-173 611.7 731 54.0
Zm00001d017492 Zea mays B73 HOM04x5M003245 ORTHO04x5M005668 1.1e-168 596.3 436 73.2
Zm00007a00015682 Zea mays B104 HOM04x5M003245 ORTHO04x5M005668 1.1e-168 596.3 436 73.2
Sspon.01G0000930-3D Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 3.5e-167 591.3 440 71.6
Sspon.01G0000930-1A Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 1.5e-165 585.9 416 73.8
Misin07G434300 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 4.7e-164 580.9 423 73.5
OB02G33900 Oryza brachyantha HOM04x5M003245 ORTHO04x5M005668 8.0e-164 580.1 433 71.1
OsR498G0204455800.01 Oryza sativa ssp. indica HOM04x5M003245 ORTHO04x5M005668 1.5e-162 575.9 424 71.7
TraesCS6B02G275600 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 9.8e-162 573.2 436 70.2
TRITD6Bv1G145190 Triticum turgidum HOM04x5M003245 ORTHO04x5M005668 9.8e-162 573.2 436 70.2
Sobic.004G294700 Sorghum bicolor HOM04x5M003245 ORTHO04x5M005668 1.3e-161 572.8 325 88.6
LOC_Os02g44104 Oryza sativa ssp. japonica HOM04x5M003245 ORTHO04x5M005668 1.7e-161 572.4 424 71.5
HORVU6Hr1G063100 Hordeum vulgare HOM04x5M003245 ORTHO04x5M005668 1.1e-160 569.7 436 70.0
TraesCS6A02G249800 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 3.1e-160 568.2 436 69.7
TRITD6Av1G159240 Triticum turgidum HOM04x5M003245 ORTHO04x5M005668 3.1e-160 568.2 436 69.7
TraesCS6D02G231500 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 7.0e-160 567.0 425 70.6
Bradi3g50726 Brachypodium distachyon HOM04x5M003245 ORTHO04x5M005668 9.1e-160 566.6 433 69.7
PH01000995G0530 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 1.0e-158 563.1 564 58.7
LP006587 Lolium perenne HOM04x5M003245 ORTHO04x5M005668 1.4e-155 552.7 421 69.4
p5.00_sc00002_p0220 Elaeis guineensis HOM04x5M003245 ORTHO04x5M005668 3.8e-113 411.8 435 52.2
Aco012817 Ananas comosus HOM04x5M003245 ORTHO04x5M005668 7.1e-112 407.5 433 52.4
Ma04_g20220 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 3.1e-107 392.1 318 62.6
Ma05_g13320 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 4.5e-106 388.3 442 48.6
Spipo11G0034400 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 8.1e-100 367.5 435 47.8
Pgl_GLEAN_10009580 Cenchrus americanus HOM04x5M003245 ORTHO04x5M005668 1.7e-97 359.8 303 64.0
Ma04_g36850 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 2.2e-97 359.4 440 47.7
Zm00008a022532 Zea mays PH207 HOM04x5M003245 ORTHO04x5M005668 4.2e-96 355.1 280 67.5
Spipo17G0022500 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 8.2e-92 340.9 433 45.0
PEQU_14480 Phalaenopsis equestris HOM04x5M003245 ORTHO04x5M005668 5.9e-82 308.1 441 44.2
Zosma85g00440 Zostera marina HOM04x5M003245 ORTHO04x5M005668 7.7e-82 307.8 433 42.5
ASH_gene6044 Apostasia shenzhenica HOM04x5M003245 ORTHO04x5M005668 2.2e-81 306.2 322 51.9
CALSI_Maker00016894 Calamus simplicifolius HOM04x5M003245 ORTHO04x5M005668 1.4e-80 303.5 332 48.5
Spipo1G0082300 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 4.2e-80 302.0 326 50.6
Potri.001G125800 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 4.1e-75 285.4 433 41.6
Potri.003G107900 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 7.7e-74 281.2 437 40.3
Potri.002G143200 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 6.5e-73 278.1 346 46.0
p5.00_sc00023_p0055 Elaeis guineensis HOM04x5M003245 ORTHO04x5M005668 3.2e-72 275.8 248 58.5
PAB00017842 Picea abies HOM04x5M003245 ORTHO04x5M005668 5.5e-72 275.0 437 39.6
GSVIVG01014046001 Vitis vinifera HOM04x5M003245 ORTHO04x5M005668 9.4e-72 274.2 313 48.9
Solyc01g095800.2 Solanum lycopersicum HOM04x5M003245 ORTHO04x5M005668 4.7e-71 271.9 340 46.8
AT5G51380 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 3.0e-70 269.2 429 38.7
Sobic.001G303825 Sorghum bicolor HOM04x5M003245 ORTHO04x5M005668 3.9e-70 268.9 174 81.0
Zosma85g00410 Zostera marina HOM04x5M003245 ORTHO04x5M005668 8.8e-70 267.7 321 44.5
AT5G51370 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 7.7e-66 254.6 435 37.2
Sspon.01G0000930-2C Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 3.8e-65 252.3 152 85.5
ATR0317G122 Amborella trichopoda HOM04x5M003245 ORTHO04x5M005668 1.1e-64 250.8 461 37.5
Solyc03g093310.2 Solanum lycopersicum HOM04x5M003245 ORTHO04x5M005668 1.1e-64 250.8 429 38.9
gene2101 Selaginella moellendorffii HOM04x5M003245 ORTHO04x5M005668 1.7e-57 226.9 494 35.8
gene5137 Selaginella moellendorffii HOM04x5M003245 ORTHO04x5M005668 1.7e-57 226.9 494 35.8
Oropetium_20150105_21241 Oropetium thomaeum HOM04x5M003245 ORTHO04x5M010895 6.1e-55 218.4 153 77.1
Pp3c14_8820 Physcomitrium patens HOM04x5M003245 ORTHO04x5M005668 8.0e-55 218.0 523 32.1
Potri.014G059100 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 5.2e-54 215.3 270 44.1
GSVIVG01018169001 Vitis vinifera HOM04x5M003245 ORTHO04x5M005668 1.3e-52 210.7 285 41.4
Pp3c10_7500 Physcomitrium patens HOM04x5M003245 ORTHO04x5M005668 1.2e-50 204.1 525 31.0
AT5G07670 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 4.5e-50 202.2 428 33.9
PAB00008675 Picea abies HOM04x5M003245 ORTHO04x5M005668 3.2e-48 196.1 361 36.3
Mapoly0089s0010 Marchantia polymorpha HOM04x5M003245 ORTHO04x5M005668 1.3e-41 174.1 480 31.2
TraesCS6D02G231600 Triticum aestivum HOM04x5M003245 ORTHO04x5M010895 1.7e-41 173.7 152 66.4
LOC_Os02g44102 Oryza sativa ssp. japonica HOM04x5M003245 ORTHO04x5M010895 1.0e-38 164.5 129 70.5
Misin07G434400 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M010895 9.8e-37 157.9 130 66.9
Sobic.004G294800 Sorghum bicolor HOM04x5M003245 ORTHO04x5M010895 9.8e-37 157.9 127 69.3
Bradi3g50721 Brachypodium distachyon HOM04x5M003245 ORTHO04x5M010895 8.3e-36 154.8 117 75.2
Sspon.01G0000920-1A Saccharum spontaneum HOM04x5M003245 ORTHO04x5M010895 5.6e-32 142.1 126 61.9
Zm00001d051367 Zea mays B73 HOM04x5M003245 ORTHO04x5M010895 5.6e-32 142.1 132 61.4
Pgl_GLEAN_10014428 Cenchrus americanus HOM04x5M003245 ORTHO04x5M010895 2.9e-20 103.2 105 57.1
Zm00008a016891 Zea mays PH207 HOM04x5M003245 ORTHO04x5M010895 7.8e-18 95.1 108 53.7
LP006588 Lolium perenne HOM04x5M003245 ORTHO04x5M010895 2.3e-17 93.6 134 51.5
Misin07G400900 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M024996 6.6e-17 92.0 164 43.9
Seita.1G235200 Setaria italica HOM04x5M003245 ORTHO04x5M024996 9.5e-16 88.2 155 45.2
Sspon.03G0007720-1A Saccharum spontaneum HOM04x5M000001 ORTHO04x5M010092 8.1e-15 85.1 81 58.0
Sobic.003G277100 Sorghum bicolor HOM04x5M000001 ORTHO04x5M010092 8.9e-14 81.6 69 60.9
Misin06G230200 Miscanthus sinensis HOM04x5M000001 ORTHO04x5M010092 5.8e-13 79.0 69 59.4
Misin05G256300 Miscanthus sinensis HOM04x5M000001 ORTHO04x5M010092 2.7e-10 70.1 45 73.3
Sspon.03G0007720-2C Saccharum spontaneum HOM04x5M000001 ORTHO04x5M010092 8.6e-09 65.1 55 60.0
Pgl_GLEAN_10009581 Cenchrus americanus HOM04x5M003245 ORTHO04x5M010895 1.9e-08 63.9 35 80.0
gene29505 Selaginella moellendorffii HOM04x5M007241 ORTHO04x5M009064 7.3e-08 62.0 324 26.5
gene31603 Selaginella moellendorffii HOM04x5M007241 ORTHO04x5M009064 2.8e-07 60.1 313 27.2
Seita.3G037200 Setaria italica HOM04x5M000398 ORTHO04x5M000623 8.1e-07 58.5 335 26.9
Solyc06g054440.2 Solanum lycopersicum HOM04x5M005490 ORTHO04x5M004478 1.4e-06 57.8 154 30.5
Potri.014G023500 Populus trichocarpa HOM04x5M001710 ORTHO04x5M001818 5.2e-06 55.8 288 27.4
GSVIVG01024623001 Vitis vinifera HOM04x5M002561 ORTHO04x5M002801 5.2e-06 55.8 136 25.7
AT1G47056 Arabidopsis thaliana HOM04x5M001710 ORTHO04x5M001818 8.9e-06 55.1 152 28.9
Sspon.07G0012970-1A Saccharum spontaneum HOM04x5M000398 ORTHO04x5M000623 8.9e-06 55.1 323 24.8

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (2 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (8 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (4 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (4 genes)
Triticum turgidum (2 genes)
Vitis vinifera (3 genes)
Zea mays B73 (2 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (1 genes)