Interactive Phylogenetics Module

Gene Id
TraesCS6A02G249800

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TraesCS6A02G249800 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 4.4e-290 999.2 497 100.0
TRITD6Av1G159240 Triticum turgidum HOM04x5M003245 ORTHO04x5M005668 4.4e-290 999.2 497 100.0
TraesCS6B02G275600 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 1.3e-281 971.1 497 97.0
TRITD6Bv1G145190 Triticum turgidum HOM04x5M003245 ORTHO04x5M005668 1.3e-281 971.1 497 97.0
TraesCS6D02G231500 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 1.8e-278 960.7 497 96.8
HORVU6Hr1G063100 Hordeum vulgare HOM04x5M003245 ORTHO04x5M005668 1.8e-270 934.1 476 96.8
Bradi3g50726 Brachypodium distachyon HOM04x5M003245 ORTHO04x5M005668 6.1e-255 882.5 494 89.5
LP006587 Lolium perenne HOM04x5M003245 ORTHO04x5M005668 1.4e-251 871.3 500 87.6
OB02G33900 Oryza brachyantha HOM04x5M003245 ORTHO04x5M005668 7.2e-232 805.8 501 82.4
OsR498G0204455800.01 Oryza sativa ssp. indica HOM04x5M003245 ORTHO04x5M005668 6.7e-230 799.3 503 81.7
LOC_Os02g44104 Oryza sativa ssp. japonica HOM04x5M003245 ORTHO04x5M005668 8.8e-230 798.9 502 81.5
Zm00001d017492 Zea mays B73 HOM04x5M003245 ORTHO04x5M005668 4.4e-229 796.6 505 82.2
Sspon.01G0000930-1P Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 2.4e-227 790.8 478 83.9
Oropetium_20150105_21240 Oropetium thomaeum HOM04x5M003245 ORTHO04x5M005668 9.1e-227 788.9 501 80.6
Sspon.01G0000930-3D Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 1.5e-221 771.5 485 82.3
Misin07G434300 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 3.4e-221 770.4 445 87.6
Seita.1G260300 Setaria italica HOM04x5M003245 ORTHO04x5M005668 2.2e-220 767.7 463 84.0
Zm00007a00015682 Zea mays B104 HOM04x5M003245 ORTHO04x5M005668 2.2e-220 767.7 483 82.2
Sspon.01G0000930-1A Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 1.5e-216 755.0 474 81.6
Misin08G230600 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 8.8e-214 745.7 455 83.5
PH01000995G0530 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 4.7e-207 723.4 398 90.2
PH01003305G0030 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 2.5e-200 701.0 594 64.8
Sobic.004G294700 Sorghum bicolor HOM04x5M003245 ORTHO04x5M005668 3.3e-176 620.9 391 81.8
p5.00_sc00002_p0220 Elaeis guineensis HOM04x5M003245 ORTHO04x5M005668 1.0e-161 572.8 476 61.8
Zjn_sc00007.1.g10190.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M003245 ORTHO04x5M005668 6.7e-161 570.1 436 69.7
Aco012817 Ananas comosus HOM04x5M003245 ORTHO04x5M005668 7.4e-160 566.6 477 61.8
Zm00008a022532 Zea mays PH207 HOM04x5M003245 ORTHO04x5M005668 3.8e-156 554.3 303 89.8
Pgl_GLEAN_10009580 Cenchrus americanus HOM04x5M003245 ORTHO04x5M005668 1.1e-155 552.7 303 89.1
Ma05_g13320 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 3.1e-150 534.6 486 57.6
Ma04_g20220 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 1.7e-148 528.9 426 63.4
Ma04_g36850 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 3.7e-143 511.1 480 56.7
Spipo11G0034400 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 4.1e-142 507.7 435 58.6
Spipo17G0022500 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 6.7e-137 490.3 471 53.7
CALSI_Maker00016894 Calamus simplicifolius HOM04x5M003245 ORTHO04x5M005668 3.4e-125 451.4 329 64.7
PEQU_14480 Phalaenopsis equestris HOM04x5M003245 ORTHO04x5M005668 9.4e-123 443.4 449 53.7
GSVIVG01014046001 Vitis vinifera HOM04x5M003245 ORTHO04x5M005668 2.3e-121 438.7 430 53.7
Zosma85g00440 Zostera marina HOM04x5M003245 ORTHO04x5M005668 2.3e-121 438.7 428 52.6
Potri.001G125800 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 4.8e-119 431.0 426 54.0
Potri.003G107900 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 8.2e-119 430.3 437 52.6
Potri.002G143200 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 2.6e-117 425.2 446 51.6
PAB00017842 Picea abies HOM04x5M003245 ORTHO04x5M005668 1.7e-116 422.5 437 50.8
ASH_gene6044 Apostasia shenzhenica HOM04x5M003245 ORTHO04x5M005668 5.0e-116 421.0 484 48.6
Zosma85g00410 Zostera marina HOM04x5M003245 ORTHO04x5M005668 1.5e-115 419.5 464 47.8
Solyc01g095800.2 Solanum lycopersicum HOM04x5M003245 ORTHO04x5M005668 2.0e-112 409.1 446 50.9
ATR0317G122 Amborella trichopoda HOM04x5M003245 ORTHO04x5M005668 1.8e-110 402.5 490 46.7
AT5G51380 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 7.7e-109 397.1 428 49.8
Solyc03g093310.2 Solanum lycopersicum HOM04x5M003245 ORTHO04x5M005668 4.7e-106 387.9 448 49.6
AT5G51370 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 9.8e-104 380.2 427 48.5
GSVIVG01018169001 Vitis vinifera HOM04x5M003245 ORTHO04x5M005668 6.1e-98 360.9 285 60.4
gene2101 Selaginella moellendorffii HOM04x5M003245 ORTHO04x5M005668 3.0e-97 358.6 485 44.1
Potri.014G059100 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 4.0e-97 358.2 270 62.2
gene5137 Selaginella moellendorffii HOM04x5M003245 ORTHO04x5M005668 6.8e-97 357.5 485 43.9
Pp3c14_8820 Physcomitrium patens HOM04x5M003245 ORTHO04x5M005668 1.7e-92 342.8 516 39.7
Pp3c10_7500 Physcomitrium patens HOM04x5M003245 ORTHO04x5M005668 5.8e-88 327.8 513 39.0
Spipo1G0082300 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 4.9e-87 324.7 377 47.2
PAB00008675 Picea abies HOM04x5M003245 ORTHO04x5M005668 4.3e-83 311.6 460 41.3
AT5G07670 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 5.6e-83 311.2 468 41.2
Mapoly0089s0010 Marchantia polymorpha HOM04x5M003245 ORTHO04x5M005668 1.2e-77 293.5 584 35.3
p5.00_sc00023_p0055 Elaeis guineensis HOM04x5M003245 ORTHO04x5M005668 6.4e-71 271.2 282 53.9
Sobic.001G303825 Sorghum bicolor HOM04x5M003245 ORTHO04x5M005668 9.5e-67 257.3 174 79.9
Sspon.01G0000930-2C Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 8.1e-66 254.2 152 87.5
gene29505 Selaginella moellendorffii HOM04x5M007241 ORTHO04x5M009064 2.0e-11 73.6 409 26.7
gene31603 Selaginella moellendorffii HOM04x5M007241 ORTHO04x5M009064 4.4e-11 72.4 409 26.4
gene10300 Selaginella moellendorffii HOM04x5M001710 ORTHO04x5M001818 1.3e-10 70.9 414 26.3
gene29354 Selaginella moellendorffii HOM04x5M001710 ORTHO04x5M001818 1.3e-10 70.9 414 26.3
Ma09_g11000 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 3.1e-09 66.2 368 26.1
Seita.3G037200 Setaria italica HOM04x5M000398 ORTHO04x5M000623 3.1e-09 66.2 412 26.2
Sspon.04G0024290-1B Saccharum spontaneum HOM04x5M001801 ORTHO04x5M000731 5.3e-09 65.5 375 22.4
gene34337 Selaginella moellendorffii HOM04x5M000398 ORTHO04x5M001566 7.0e-09 65.1 390 25.9
Ma04_g12920 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 1.2e-08 64.3 398 23.9
GSVIVG01017859001 Vitis vinifera HOM04x5M005490 ORTHO04x5M004478 1.2e-08 64.3 220 30.5
gene30975 Selaginella moellendorffii HOM04x5M000398 ORTHO04x5M001566 2.0e-08 63.5 386 26.4
ATR0490G002 Amborella trichopoda HOM04x5M001710 ORTHO04x5M001818 1.0e-07 61.2 210 30.5
LP024736 Lolium perenne HOM04x5M001010 ORTHO04x5M000824 1.0e-07 61.2 296 26.7
LP026565 Lolium perenne HOM04x5M006240 ORTHO04x5M008259 1.0e-07 61.2 125 31.2
Ma09_g20070 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 1.0e-07 61.2 436 24.5
Spipo25G0007400 Spirodela polyrhiza HOM04x5M001710 ORTHO04x5M001818 1.0e-07 61.2 389 21.6
Potri.014G023500 Populus trichocarpa HOM04x5M001710 ORTHO04x5M001818 1.3e-07 60.8 380 24.5
p5.00_sc00109_p0004 Elaeis guineensis HOM04x5M001710 ORTHO04x5M001818 1.7e-07 60.5 454 23.6
Solyc06g054440.2 Solanum lycopersicum HOM04x5M005490 ORTHO04x5M004478 1.7e-07 60.5 169 31.4
AT2G25490 Arabidopsis thaliana HOM04x5M001828 ORTHO04x5M001806 2.2e-07 60.1 283 21.6
PAB00008463 Picea abies HOM04x5M002561 ORTHO04x5M002801 2.2e-07 60.1 383 20.4
CALSI_Maker00022215 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 2.9e-07 59.7 184 26.6
Sobic.009G045300 Sorghum bicolor HOM04x5M000398 ORTHO04x5M000623 2.9e-07 59.7 386 25.1
GSVIVG01030257001 Vitis vinifera HOM04x5M002561 ORTHO04x5M002801 2.9e-07 59.7 258 19.4
CALSI_Maker00028890 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 3.8e-07 59.3 263 24.3
Misin16G034100 Miscanthus sinensis HOM04x5M000398 ORTHO04x5M000623 3.8e-07 59.3 386 25.1
Potri.002G123100 Populus trichocarpa HOM04x5M001710 ORTHO04x5M001818 6.5e-07 58.5 416 24.3
Potri.005G141800 Populus trichocarpa HOM04x5M001710 ORTHO04x5M001818 6.5e-07 58.5 395 23.8
gene429 Selaginella moellendorffii HOM04x5M002561 ORTHO04x5M002801 6.5e-07 58.5 291 24.4
Sspon.07G0012970-3C Saccharum spontaneum HOM04x5M000398 ORTHO04x5M000623 6.5e-07 58.5 334 26.9
Sspon.07G0012970-2B Saccharum spontaneum HOM04x5M000398 ORTHO04x5M000623 6.5e-07 58.5 387 25.6
Bradi2g35720 Brachypodium distachyon HOM04x5M000398 ORTHO04x5M000623 8.5e-07 58.2 398 26.1
PAB00028759 Picea abies HOM04x5M001710 ORTHO04x5M001818 1.5e-06 57.4 404 25.2
CALSI_Maker00022218 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 1.9e-06 57.0 183 26.2
TraesCS4D02G148000 Triticum aestivum HOM04x5M005490 ORTHO04x5M004478 1.9e-06 57.0 181 29.8
GSVIVG01024623001 Vitis vinifera HOM04x5M002561 ORTHO04x5M002801 1.9e-06 57.0 137 24.8
CALSI_Maker00032187 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 2.5e-06 56.6 183 25.1
TraesCS1B02G008900 Triticum aestivum HOM04x5M001010 ORTHO04x5M000824 2.5e-06 56.6 224 28.1
CALSI_Maker00027914 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 3.2e-06 56.2 169 27.2
CALSI_Maker00022210 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 3.2e-06 56.2 169 27.2
CALSI_Maker00037456 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 3.2e-06 56.2 404 23.0
Aco020528 Ananas comosus HOM04x5M001710 ORTHO04x5M001818 5.5e-06 55.5 396 24.5
CALSI_Maker00035421 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 5.5e-06 55.5 183 25.7
AT1G47056 Arabidopsis thaliana HOM04x5M001710 ORTHO04x5M001818 7.2e-06 55.1 190 27.4
Ma09_g23070 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 7.2e-06 55.1 471 22.7
PAB00015691 Picea abies HOM04x5M002561 ORTHO04x5M002801 7.2e-06 55.1 240 21.2
Spipo12G0041900 Spirodela polyrhiza HOM04x5M001010 ORTHO04x5M000824 7.2e-06 55.1 267 24.0
CALSI_Maker00028887 Calamus simplicifolius HOM04x5M006985 ORTHO04x5M009030 9.4e-06 54.7 169 27.2
Seita.1G246500 Setaria italica HOM04x5M006240 ORTHO04x5M008259 9.4e-06 54.7 123 30.1

Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (10 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (1 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (7 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (5 genes)
Populus trichocarpa (7 genes)
Saccharum spontaneum (7 genes)
Selaginella moellendorffii (9 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (5 genes)
Triticum aestivum (5 genes)
Triticum turgidum (2 genes)
Vitis vinifera (5 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings