Interactive Phylogenetics Module

Gene Id
TraesCS5D02G031500

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TraesCS5D02G031500 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 7.3e-202 705.7 358 100.0
TraesCS5B02G022900 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 3.1e-184 647.1 343 96.2
TRITD5Bv1G008000 Triticum turgidum HOM04x5M004591 ORTHO04x5M005491 1.5e-178 628.2 345 94.8
TRITD5Av1G009960 Triticum turgidum HOM04x5M004591 ORTHO04x5M005491 1.0e-171 605.5 344 91.6
Bradi4g01215 Brachypodium distachyon HOM04x5M004591 ORTHO04x5M005491 9.6e-170 599.0 345 87.5
TraesCS5A02G025100 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 9.6e-170 599.0 350 89.1
Seita.2G382200 Setaria italica HOM04x5M004591 ORTHO04x5M005491 4.6e-156 553.5 343 82.5
Sobic.008G125100 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 2.4e-152 541.2 345 80.3
OsR498G1222137800.01 Oryza sativa ssp. indica HOM04x5M004591 ORTHO04x5M005491 9.1e-152 539.3 367 77.1
Zm00001d023817 Zea mays B73 HOM04x5M004591 ORTHO04x5M005491 6.5e-150 533.1 338 79.6
Zm00008a036741 Zea mays PH207 HOM04x5M004591 ORTHO04x5M005491 6.5e-150 533.1 338 79.6
Misin14G119200 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 4.2e-149 530.4 342 79.2
Zm00008a012364 Zea mays PH207 HOM04x5M004591 ORTHO04x5M005491 2.7e-148 527.7 340 78.5
Misin15G141500 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 7.9e-148 526.2 342 78.4
LOC_Os12g42870 Oryza sativa ssp. japonica HOM04x5M004591 ORTHO04x5M005491 7.4e-146 519.6 299 86.6
OB12G26130 Oryza brachyantha HOM04x5M004591 ORTHO04x5M005491 9.7e-146 519.2 347 76.9
Sspon.02G0043910-3D Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 1.4e-144 515.4 371 73.3
HORVU5Hr1G006850 Hordeum vulgare HOM04x5M004591 ORTHO04x5M005491 2.4e-144 514.6 343 78.7
Zm00001d041625 Zea mays B73 HOM04x5M004591 ORTHO04x5M005491 2.4e-144 514.6 359 74.1
Pgl_GLEAN_10007040 Cenchrus americanus HOM04x5M004591 ORTHO04x5M005491 1.2e-140 502.3 343 76.7
Zjn_sc00088.1.g00680.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004591 ORTHO04x5M005491 4.5e-135 483.8 349 73.1
Zm00007a00028909 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 1.2e-130 469.2 307 78.2
Sspon.02G0043910-2C Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 1.8e-128 461.8 298 79.9
Aco010714 Ananas comosus HOM04x5M004591 ORTHO04x5M005491 9.1e-128 459.5 312 73.1
Oropetium_20150105_26144 Oropetium thomaeum HOM04x5M004591 ORTHO04x5M005491 1.3e-126 455.7 315 75.6
Spipo14G0021500 Spirodela polyrhiza HOM04x5M004591 ORTHO04x5M005491 2.3e-115 418.3 351 60.7
evm.TU.AsparagusV1_01.2651.V1.1 Asparagus officinalis HOM04x5M004591 ORTHO04x5M005491 3.4e-114 414.5 326 62.9
CALSI_Maker00046052 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 7.5e-114 413.3 338 62.7
PEQU_13280 Phalaenopsis equestris HOM04x5M004591 ORTHO04x5M005491 4.9e-113 410.6 308 64.6
Ma10_g14640 Musa acuminata HOM04x5M004591 ORTHO04x5M005491 7.0e-112 406.8 333 62.2
Zosma222g00340 Zostera marina HOM04x5M004591 ORTHO04x5M005491 8.0e-108 393.3 301 63.5
Potri.015G022400 Populus trichocarpa HOM04x5M004591 ORTHO04x5M005491 5.8e-106 387.1 308 60.7
GSVIVG01028720001 Vitis vinifera HOM04x5M004591 ORTHO04x5M005491 9.8e-106 386.3 328 59.1
ATR0661G386 Amborella trichopoda HOM04x5M004591 ORTHO04x5M005491 1.3e-105 386.0 318 59.7
Solyc06g051900.2 Solanum lycopersicum HOM04x5M004591 ORTHO04x5M005491 1.3e-102 375.9 309 60.2
AT5G41480 Arabidopsis thaliana HOM04x5M004591 ORTHO04x5M005491 6.2e-100 367.1 310 60.3
p5.00_sc00001_p0333 Elaeis guineensis HOM04x5M004591 ORTHO04x5M005491 2.9e-97 358.2 308 62.0
CALSI_Maker00004256 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 3.3e-85 318.2 330 50.6
ASH_gene13367 Apostasia shenzhenica HOM04x5M004591 ORTHO04x5M005491 5.6e-85 317.4 326 50.6
Mapoly0084s0006 Marchantia polymorpha HOM04x5M004591 ORTHO04x5M005491 1.9e-80 302.4 340 49.1
Pp3c1_19310 Physcomitrium patens HOM04x5M004591 ORTHO04x5M005491 5.4e-80 300.8 346 47.7
gene9611 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 9.3e-80 300.1 303 51.8
gene32722 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 2.1e-79 298.9 303 51.5
Zm00007a00021750 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 3.0e-78 295.0 189 79.9
Sspon.02G0043910-1T Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 1.1e-72 276.6 176 80.1
PH01000955G0520 Phyllostachys edulis HOM04x5M004591 ORTHO04x5M005491 2.4e-72 275.4 230 67.0
Cre03.g176800 Chlamydomonas reinhardtii HOM04x5M004591 ORTHO04x5M005491 1.0e-49 200.3 238 47.1
Zm00007a00021748 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 3.9e-46 188.3 118 78.8
CALSI_Maker00048144 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 1.4e-35 153.3 105 69.5
MCO16G056 Micromonas commoda HOM04x5M004591 ORTHO04x5M005491 5.3e-35 151.4 236 37.3
p5.00_sc00099_p0002 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 2.6e-29 132.5 251 34.3
gene16703 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 4.8e-28 128.3 336 32.7
ATR0559G016 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 1.4e-27 126.7 290 32.4
MisinT096700 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 1.6e-26 123.2 69 84.1
Ma09_g03530 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 5.9e-26 121.3 250 32.8
ASH_gene15508 Apostasia shenzhenica HOM04x5M002239 ORTHO04x5M002625 1.3e-25 120.2 189 38.1
gene29954 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 1.3e-25 120.2 244 36.1
CALSI_Maker00039217 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 1.7e-25 119.8 294 31.3
Zosma129g00040 Zostera marina HOM04x5M002239 ORTHO04x5M002625 2.9e-25 119.0 220 34.5
gene1317 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 3.8e-25 118.6 166 39.8
gene25554 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 3.8e-25 118.6 187 37.4
Spipo6G0074700 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 3.8e-25 118.6 196 36.2
TRITD5Av1G257300 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 1.1e-24 117.1 177 37.3
Mapoly0010s0086 Marchantia polymorpha HOM04x5M002239 ORTHO04x5M002625 1.5e-24 116.7 260 33.1
TraesCSU02G034000 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.5e-24 116.7 177 36.7
OB03G10890 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 1.9e-24 116.3 231 32.5
Zosma162g00210 Zostera marina HOM04x5M002239 ORTHO04x5M002625 1.9e-24 116.3 195 36.9
MCO10G081 Micromonas commoda HOM04x5M002239 ORTHO04x5M002625 2.5e-24 115.9 179 38.5
Zjn_sc00092.1.g01510.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002239 ORTHO04x5M002625 2.5e-24 115.9 174 36.8
evm.TU.AsparagusV1_08.3611.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 3.2e-24 115.5 227 34.4
TraesCS1A02G173700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 3.2e-24 115.5 222 33.8
TRITD1Av1G111900 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 3.2e-24 115.5 222 33.8
LP000959 Lolium perenne HOM04x5M002239 ORTHO04x5M002625 4.2e-24 115.2 240 32.1
Ma06_g35910 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 4.2e-24 115.2 189 38.1
gene850 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 4.2e-24 115.2 173 38.7
gene852 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 4.2e-24 115.2 173 38.7
Solyc05g052920.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 5.5e-24 114.8 167 38.9
Sspon.01G0000640-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 5.5e-24 114.8 167 38.9
gene7721 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 7.2e-24 114.4 173 38.7
Sspon.01G0000640-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 7.2e-24 114.4 167 38.3
TraesCS4B02G392600 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 7.2e-24 114.4 167 37.1
LOC_Os03g02030 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 9.4e-24 114.0 167 37.7
OsR498G0305106600.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 9.4e-24 114.0 167 37.7
Ma01_g05040 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 1.2e-23 113.6 161 41.0
Sobic.001G535500 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 1.2e-23 113.6 230 33.0
HORVU4Hr1G089590 Hordeum vulgare HOM04x5M002239 ORTHO04x5M002625 1.6e-23 113.2 229 32.8
Misin01G518000 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 1.6e-23 113.2 167 38.3
Aco016849 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 2.1e-23 112.8 256 30.5
Bradi1g77850 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 2.1e-23 112.8 179 35.8
Misin02G507900 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 2.1e-23 112.8 157 39.5
Oropetium_20150105_09415 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 2.1e-23 112.8 221 33.5
OsR498G1019001800.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 2.7e-23 112.5 222 32.4
Potri.010G197800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 2.7e-23 112.5 189 34.9
Sspon.01G0020910-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 2.7e-23 112.5 254 32.7
ATR0721G042 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 3.6e-23 112.1 167 38.9
Potri.008G060600 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 3.6e-23 112.1 189 34.4
Seita.9G200900 Setaria italica HOM04x5M002239 ORTHO04x5M002625 3.6e-23 112.1 167 37.7
Seita.9G571100 Setaria italica HOM04x5M002239 ORTHO04x5M002625 3.6e-23 112.1 236 31.8
GSVIVG01033555001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 3.6e-23 112.1 205 35.6
p5.00_sc00032_p0096 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 4.7e-23 111.7 189 35.4
Zm00008a036205 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 4.7e-23 111.7 157 38.2
Pp3c24_9100 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 6.1e-23 111.3 168 40.5
GSVIVG01016464001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 6.1e-23 111.3 167 37.7
Potri.006G045400 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 8.0e-23 110.9 208 35.6
AT3G55630 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 1.0e-22 110.5 167 38.3
TraesCS1B02G190700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.0e-22 110.5 167 37.7
TRITD1Bv1G112470 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 1.0e-22 110.5 167 37.7
OB10G22100 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 1.4e-22 110.2 221 33.5
evm.TU.AsparagusV1_05.14.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 2.3e-22 109.4 228 32.9
Pgl_GLEAN_10021628 Cenchrus americanus HOM04x5M002239 ORTHO04x5M002625 3.0e-22 109.0 260 31.9
Misin01G184500 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 3.0e-22 109.0 155 38.7
Pp3c23_670 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 3.0e-22 109.0 166 39.2
AT5G05980 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 4.0e-22 108.6 157 38.2
Zm00008a004043 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 4.0e-22 108.6 157 38.2
Spipo27G0015800 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 6.7e-22 107.8 157 39.5
TraesCS1D02G165100 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 6.7e-22 107.8 223 33.2
Aco002379 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 2.0e-21 106.3 261 33.0
Potri.016G041800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 2.6e-21 105.9 157 37.6
Sspon.01G0020910-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 2.6e-21 105.9 155 38.1
PEQU_09314 Phalaenopsis equestris HOM04x5M002239 ORTHO04x5M002625 5.7e-21 104.8 200 33.0
Bradi3g30210 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 1.3e-20 103.6 237 30.8
PAB00036996 Picea abies HOM04x5M004591 ORTHO04x5M005491 1.7e-20 103.2 85 56.5
Sspon.01G0000640-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.7e-20 103.2 157 36.9
AT3G10160 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 2.8e-20 102.4 157 37.6
MisinT096800 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 2.8e-20 102.4 113 52.2
CALSI_Maker00013977 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 1.6e-18 96.7 260 27.7
Cre05.g239100 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 1.3e-17 93.6 188 32.4
Cre05.g239067 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 1.3e-17 93.6 188 32.4
Oropetium_20150105_21336 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 1.7e-17 93.2 127 37.8
CALSI_Maker00006600 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 2.9e-17 92.4 54 74.1
PAB00049973 Picea abies HOM04x5M004591 ORTHO04x5M005491 2.9e-17 92.4 76 61.8
Solyc04g016550.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 2.9e-17 92.4 170 35.9
Sspon.01G0020910-4D Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 3.8e-17 92.0 155 34.8
Sobic.008G177850 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 6.5e-17 91.3 70 61.4
CALSI_Maker00015974 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 5.5e-16 88.2 193 33.2
Sspon.01G0020910-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 7.2e-16 87.8 146 34.9
Sspon.02G0053310-1C Saccharum spontaneum HOM04x5M000005 ORTHO04x5M000177 6.1e-15 84.7 73 61.6
LOC_Os10g35940 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 2.0e-13 79.7 222 27.0
Sobic.001G201900 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 3.7e-12 75.5 155 30.3
PAB00032154 Picea abies HOM04x5M004591 ORTHO04x5M005491 1.1e-11 73.9 67 50.7
Zm00007a00051220 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 1.8e-11 73.2 140 30.0
Sobic.008G137200 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 5.9e-10 68.2 48 64.6
LP018771 Lolium perenne HOM04x5M004591 ORTHO04x5M005491 1.3e-09 67.0 32 96.9
HORVU1Hr1G045670 Hordeum vulgare HOM04x5M002239 ORTHO04x5M002625 2.9e-09 65.9 78 44.9
Zm00001d048514 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 2.9e-09 65.9 153 31.4
CALSI_Maker00045140 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 3.8e-09 65.5 73 42.5
Misin02G171600 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 8.5e-09 64.3 103 33.0
PH01000012G0660 Phyllostachys edulis HOM04x5M002239 ORTHO04x5M002625 8.5e-09 64.3 78 43.6
Pgl_GLEAN_10037820 Cenchrus americanus HOM04x5M002239 ORTHO04x5M002625 1.9e-08 63.2 89 38.2
Zm00007a00051487 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 3.2e-08 62.4 101 33.7
gene35885 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 4.2e-08 62.0 70 42.9
Zm00007a00051700 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 4.2e-08 62.0 137 29.9
Zm00001d032529 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 5.5e-08 61.6 101 33.7
PEQU_08658 Phalaenopsis equestris HOM04x5M002239 ORTHO04x5M002625 1.0e-06 57.4 106 35.8

Amborella trichopoda (3 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (8 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (3 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (8 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (3 genes)
Picea abies (3 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (11 genes)
Selaginella moellendorffii (10 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (5 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (8 genes)
Triticum turgidum (5 genes)
Vitis vinifera (3 genes)
Zea mays B73 (4 genes)
Zea mays B104 (6 genes)
Zea mays PH207 (4 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings