Interactive Phylogenetics Module

Gene Id
TraesCS5B02G138600

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TraesCS5B02G138600 Triticum aestivum HOM04x5M004507 ORTHO04x5M005410 4.3e-235 816.2 397 100.0
TRITD5Bv1G088770 Triticum turgidum HOM04x5M004507 ORTHO04x5M005410 4.3e-235 816.2 397 100.0
TRITD5Av1G105920 Triticum turgidum HOM04x5M004507 ORTHO04x5M005410 1.7e-231 804.3 397 98.0
TraesCS5D02G152200 Triticum aestivum HOM04x5M004507 ORTHO04x5M005410 8.1e-226 785.4 443 88.3
HORVU5Hr1G045070 Hordeum vulgare HOM04x5M004507 ORTHO04x5M005410 3.7e-223 776.5 443 87.1
TraesCS5A02G138500 Triticum aestivum HOM04x5M004507 ORTHO04x5M005410 1.0e-220 768.5 443 86.9
LP033593 Lolium perenne HOM04x5M004507 ORTHO04x5M005410 1.2e-218 761.5 423 89.1
LOC_Os12g03540 Oryza sativa ssp. japonica HOM04x5M004507 ORTHO04x5M005410 6.0e-205 716.1 444 80.2
OsR498G1220875600.01 Oryza sativa ssp. indica HOM04x5M004507 ORTHO04x5M005410 2.3e-204 714.1 444 80.0
OsR498G1119370400.01 Oryza sativa ssp. indica HOM04x5M004507 ORTHO04x5M005410 1.6e-202 708.0 444 78.6
LOC_Os11g03794 Oryza sativa ssp. japonica HOM04x5M004507 ORTHO04x5M005410 5.3e-201 703.0 444 78.2
OB11G11590 Oryza brachyantha HOM04x5M004507 ORTHO04x5M005410 7.9e-197 689.1 443 77.7
Zm00008a036332 Zea mays PH207 HOM04x5M004507 ORTHO04x5M005410 1.2e-192 675.2 414 79.2
Sobic.008G017200 Sorghum bicolor HOM04x5M004507 ORTHO04x5M005410 9.9e-192 672.2 445 74.2
Seita.7G310400 Setaria italica HOM04x5M004507 ORTHO04x5M005410 1.7e-191 671.4 441 75.5
Misin15G007600 Miscanthus sinensis HOM04x5M004507 ORTHO04x5M005410 2.4e-190 667.5 445 73.7
Seita.8G003800 Setaria italica HOM04x5M004507 ORTHO04x5M005410 1.6e-189 664.8 442 75.1
Oropetium_20150105_11037 Oropetium thomaeum HOM04x5M004507 ORTHO04x5M005410 3.0e-188 660.6 436 75.9
Bradi4g43700 Brachypodium distachyon HOM04x5M004507 ORTHO04x5M005410 7.7e-168 592.8 379 79.9
MisinT482300 Miscanthus sinensis HOM04x5M004507 ORTHO04x5M005410 1.0e-167 592.4 406 71.7
Sspon.07G0038610-1D Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 1.4e-166 588.6 398 74.9
p5.00_sc00094_p0061 Elaeis guineensis HOM04x5M004507 ORTHO04x5M005410 1.3e-159 565.5 417 66.2
Potri.016G030400 Populus trichocarpa HOM04x5M004507 ORTHO04x5M005410 3.6e-149 530.8 448 56.9
Ma08_g26840 Musa acuminata HOM04x5M004507 ORTHO04x5M005410 1.1e-147 525.8 444 60.1
Pgl_GLEAN_10033199 Cenchrus americanus HOM04x5M004507 ORTHO04x5M005410 7.7e-144 513.1 380 68.7
ASH_gene5141 Apostasia shenzhenica HOM04x5M004507 ORTHO04x5M005410 3.6e-141 504.2 445 56.4
CALSI_Maker00048110 Calamus simplicifolius HOM04x5M004507 ORTHO04x5M005410 3.8e-135 484.2 368 64.4
OB12G11930 Oryza brachyantha HOM04x5M004507 ORTHO04x5M006219 1.1e-134 482.6 387 68.2
Zosma6g00180 Zostera marina HOM04x5M004507 ORTHO04x5M005410 1.0e-132 476.1 450 55.3
AT3G56900 Arabidopsis thaliana HOM04x5M004507 ORTHO04x5M005410 4.9e-130 467.2 446 54.5
Aco023948 Ananas comosus HOM04x5M004507 ORTHO04x5M005410 2.8e-125 451.4 390 61.3
Sspon.07G0019960-1A Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 5.4e-121 437.2 337 66.2
Sspon.07G0038600-1D Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 1.2e-120 436.0 394 59.6
Sspon.07G0019960-2C Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 2.2e-106 388.7 374 57.8
Pgl_GLEAN_10009938 Cenchrus americanus HOM04x5M004507 ORTHO04x5M005410 2.4e-97 358.6 268 69.4
Zm00007a00022532 Zea mays B104 HOM04x5M004507 ORTHO04x5M005410 1.1e-94 349.7 183 91.3
GSVIVG01025850001 Vitis vinifera HOM04x5M004507 ORTHO04x5M005410 4.0e-92 341.3 200 75.5
Mapoly0010s0124 Marchantia polymorpha HOM04x5M004507 ORTHO04x5M005410 1.2e-91 339.7 479 39.5
gene10650 Selaginella moellendorffii HOM04x5M004507 ORTHO04x5M005410 2.2e-90 335.5 478 40.6
gene36333 Selaginella moellendorffii HOM04x5M004507 ORTHO04x5M005410 2.2e-90 335.5 478 40.6
evm.TU.AsparagusV1_02.1443.V1.1 Asparagus officinalis HOM04x5M004507 ORTHO04x5M005410 8.4e-90 333.6 198 77.8
ATR0307G134 Amborella trichopoda HOM04x5M004507 ORTHO04x5M005410 6.0e-88 327.4 198 72.7
Zm00001d023264 Zea mays B73 HOM04x5M004507 ORTHO04x5M005410 6.2e-85 317.4 229 68.1
Spipo6G0054400 Spirodela polyrhiza HOM04x5M004507 ORTHO04x5M005410 1.2e-83 313.2 198 71.2
Pp3c11_18220 Physcomitrium patens HOM04x5M004507 ORTHO04x5M005410 4.2e-81 304.7 459 35.9
Sspon.07G0019960-1P Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 3.1e-76 288.5 231 63.6
PEQU_35849 Phalaenopsis equestris HOM04x5M004507 ORTHO04x5M005410 2.5e-70 268.9 284 48.9
gene37195 Selaginella moellendorffii HOM04x5M004507 ORTHO04x5M005410 4.0e-68 261.5 200 56.0
evm.TU.AsparagusV1_02.1442.V1.1 Asparagus officinalis HOM04x5M004507 ORTHO04x5M005410 1.8e-60 236.1 230 53.5
Zm00001d023266 Zea mays B73 HOM04x5M004507 ORTHO04x5M005410 7.7e-51 204.1 124 82.3
ATR0307G100 Amborella trichopoda HOM04x5M004507 ORTHO04x5M005410 3.8e-50 201.8 235 46.8
Solyc08g036600.1 Solanum lycopersicum HOM04x5M004507 ORTHO04x5M005410 2.7e-48 195.7 197 47.2
LP035520 Lolium perenne HOM04x5M004507 ORTHO04x5M005410 2.3e-47 192.6 107 86.0
GSVIVG01025851001 Vitis vinifera HOM04x5M004507 ORTHO04x5M005410 2.2e-42 176.0 178 52.2
PAB00036398 Picea abies HOM04x5M004507 ORTHO04x5M005410 9.7e-38 160.6 106 70.8
Zjn_sc00167.1.g00370.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004507 ORTHO04x5M005410 5.9e-35 151.4 290 35.5
OsR498G1220885900.01 Oryza sativa ssp. indica HOM04x5M004507 ORTHO04x5M005410 1.5e-33 146.7 92 78.3
Zjn_sc00067.1.g00340.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004507 ORTHO04x5M005410 8.0e-32 141.0 293 33.8
Zm00007a00022530 Zea mays B104 HOM04x5M004507 ORTHO04x5M005410 1.0e-26 124.0 106 58.5
LOC_Os12g03730 Oryza sativa ssp. japonica HOM04x5M000377 ORTHO04x5M000276 4.7e-16 88.6 163 40.5
MCO12G281 Micromonas commoda HOM04x5M004507 ORTHO04x5M005410 2.0e-14 83.2 196 31.1
LOC_Os12g03601 Oryza sativa ssp. japonica HOM04x5M004507 ORTHO04x5M005410 3.1e-12 75.9 54 75.9
Pgl_GLEAN_10018462 Cenchrus americanus HOM04x5M004507 ORTHO04x5M005410 7.8e-11 71.2 89 44.9

Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (4 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (1 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (3 genes)
Setaria italica (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (2 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings