Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TraesCS4B02G302700 Triticum aestivum HOM04x5M003062 ORTHO04x5M003442 2.0e-107 391.3 238 100.0
TraesCS4A02G002400 Triticum aestivum HOM04x5M003062 ORTHO04x5M003442 2.9e-106 387.5 236 99.6
TRITD4Bv1G175000 Triticum turgidum HOM04x5M003062 ORTHO04x5M003442 3.8e-106 387.1 238 99.2
HORVU4Hr1G077970 Hordeum vulgare HOM04x5M003062 ORTHO04x5M003442 8.0e-104 379.4 236 98.3
HORVU4Hr1G056200 Hordeum vulgare HOM04x5M003062 ORTHO04x5M003442 3.7e-101 370.5 237 97.5
TRITD4Av1G001030 Triticum turgidum HOM04x5M003062 ORTHO04x5M003442 5.4e-100 366.7 214 98.6
TraesCS4D02G301200 Triticum aestivum HOM04x5M003062 ORTHO04x5M003442 7.0e-100 366.3 213 99.5
PH01000803G0280 Phyllostachys edulis HOM04x5M003062 ORTHO04x5M003442 1.5e-94 348.6 236 80.1
Bradi1g72120 Brachypodium distachyon HOM04x5M003062 ORTHO04x5M003442 3.7e-93 344.0 236 84.7
OsR498G0305351100.01 Oryza sativa ssp. indica HOM04x5M003062 ORTHO04x5M003442 4.1e-92 340.5 236 78.8
LOC_Os03g08770 Oryza sativa ssp. japonica HOM04x5M003062 ORTHO04x5M003442 9.1e-92 339.3 236 78.4
Seita.9G513800 Setaria italica HOM04x5M003062 ORTHO04x5M003442 4.5e-91 337.0 236 82.2
Sobic.001G478300 Sorghum bicolor HOM04x5M003062 ORTHO04x5M003442 1.9e-89 331.6 236 75.4
Misin01G450600 Miscanthus sinensis HOM04x5M003062 ORTHO04x5M003442 2.5e-89 331.3 236 75.8
Misin01G450900 Miscanthus sinensis HOM04x5M003062 ORTHO04x5M003442 1.6e-88 328.6 236 75.0
Seita.1G081800 Setaria italica HOM04x5M003062 ORTHO04x5M003442 1.6e-88 328.6 236 75.4
OB03G16420 Oryza brachyantha HOM04x5M003062 ORTHO04x5M003442 2.8e-88 327.8 238 76.1
OsR498G0306417600.01 Oryza sativa ssp. indica HOM04x5M003062 ORTHO04x5M003442 1.8e-87 325.1 236 75.0
OB0111G10030 Oryza brachyantha HOM04x5M003062 ORTHO04x5M003442 1.2e-86 322.4 235 74.9
Sspon.01G0004720-4D Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 1.2e-86 322.4 214 79.9
Sspon.01G0004720-1P Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 1.2e-86 322.4 214 79.9
Sspon.01G0004720-3C Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 4.4e-86 320.5 214 79.4
Oropetium_20150105_00315 Oropetium thomaeum HOM04x5M003062 ORTHO04x5M003442 5.7e-86 320.1 236 78.8
LP029391 Lolium perenne HOM04x5M003062 ORTHO04x5M003442 2.2e-85 318.2 236 83.5
Zm00001d027962 Zea mays B73 HOM04x5M003062 ORTHO04x5M003442 4.9e-85 317.0 214 78.5
Zm00008a000563 Zea mays PH207 HOM04x5M003062 ORTHO04x5M003442 4.9e-85 317.0 214 78.5
Pgl_GLEAN_10008730 Cenchrus americanus HOM04x5M003062 ORTHO04x5M003442 2.7e-83 311.2 236 77.1
Misin01G358200 Miscanthus sinensis HOM04x5M003062 ORTHO04x5M003442 2.5e-81 304.7 215 76.7
Zm00001d048239 Zea mays B73 HOM04x5M003062 ORTHO04x5M003442 4.0e-79 297.4 233 69.5
Sspon.01G0009260-2B Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 1.2e-78 295.8 214 75.2
Zjn_sc00003.1.g10180.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003062 ORTHO04x5M003442 3.4e-78 294.3 214 74.8
Sspon.01G0004720-1A Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 2.9e-77 291.2 195 79.5
Zm00007a00015625 Zea mays B104 HOM04x5M003062 ORTHO04x5M003442 1.2e-75 285.8 211 72.5
Zm00008a035970 Zea mays PH207 HOM04x5M003062 ORTHO04x5M003442 1.2e-75 285.8 211 72.5
Sspon.01G0009260-3D Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 1.9e-73 278.5 199 75.9
Aco004029 Ananas comosus HOM04x5M003062 ORTHO04x5M003442 8.1e-72 273.1 254 61.0
CALSI_Maker00016696 Calamus simplicifolius HOM04x5M003062 ORTHO04x5M003442 8.1e-72 273.1 215 68.8
PEQU_04760 Phalaenopsis equestris HOM04x5M003062 ORTHO04x5M003442 2.4e-68 261.5 213 64.8
Ma01_g08730 Musa acuminata HOM04x5M003062 ORTHO04x5M003442 5.4e-68 260.4 236 62.3
p5.00_sc00033_p0156 Elaeis guineensis HOM04x5M003062 ORTHO04x5M003442 3.5e-67 257.7 239 59.4
CALSI_Maker00011001 Calamus simplicifolius HOM04x5M003062 ORTHO04x5M003442 4.6e-67 257.3 214 65.9
Ma04_g11640 Musa acuminata HOM04x5M003062 ORTHO04x5M003442 3.0e-66 254.6 236 59.7
LOC_Os03g37580 Oryza sativa ssp. japonica HOM04x5M003062 ORTHO04x5M003442 3.3e-65 251.1 150 86.0
Aco002062 Ananas comosus HOM04x5M003062 ORTHO04x5M003442 5.6e-65 250.4 249 57.8
Sspon.01G0004720-2P Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 6.2e-64 246.9 150 85.3
Sspon.01G0004720-2B Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 1.1e-63 246.1 207 65.7
evm.TU.AsparagusV1_08.698.V1.1 Asparagus officinalis HOM04x5M003062 ORTHO04x5M003442 2.2e-61 238.4 210 62.9
Potri.006G119200 Populus trichocarpa HOM04x5M003062 ORTHO04x5M003442 1.2e-56 222.6 206 62.1
GSVIVG01033713001 Vitis vinifera HOM04x5M003062 ORTHO04x5M003442 1.6e-56 222.2 213 59.2
p5.00_sc00134_p0086 Elaeis guineensis HOM04x5M003062 ORTHO04x5M003442 4.0e-55 217.6 236 53.0
Potri.016G097000 Populus trichocarpa HOM04x5M003062 ORTHO04x5M003442 2.6e-54 214.9 206 60.2
AT2G36680 Arabidopsis thaliana HOM04x5M003062 ORTHO04x5M003442 3.8e-53 211.1 208 57.7
AT3G53120 Arabidopsis thaliana HOM04x5M003062 ORTHO04x5M003442 6.4e-53 210.3 164 66.5
Solyc10g083780.1 Solanum lycopersicum HOM04x5M003062 ORTHO04x5M003442 2.4e-52 208.4 216 55.6
Zosma78g00270 Zostera marina HOM04x5M003062 ORTHO04x5M003442 1.2e-51 206.1 212 55.7
evm.TU.AsparagusV1_Unassigned.949.V1.1 Asparagus officinalis HOM04x5M003062 ORTHO04x5M003442 7.8e-51 203.4 212 56.6
Zm00008a033609 Zea mays PH207 HOM04x5M003062 ORTHO04x5M003442 6.2e-48 193.7 162 65.4
Spipo1G0029400 Spirodela polyrhiza HOM04x5M003062 ORTHO04x5M003442 2.4e-47 191.8 172 59.9
Solyc10g085810.1 Solanum lycopersicum HOM04x5M003062 ORTHO04x5M003442 5.8e-46 187.2 165 61.8
ATR1158G038 Amborella trichopoda HOM04x5M003062 ORTHO04x5M003442 1.4e-44 182.6 164 57.3
Zm00007a00023822 Zea mays B104 HOM04x5M003062 ORTHO04x5M003442 3.0e-42 174.9 108 83.3
PAB00013217 Picea abies HOM04x5M003062 ORTHO04x5M003442 3.2e-36 154.8 202 45.0
Mapoly0070s0080 Marchantia polymorpha HOM04x5M003062 ORTHO04x5M003442 1.0e-34 149.8 224 42.0
gene26822 Selaginella moellendorffii HOM04x5M003062 ORTHO04x5M003442 2.1e-32 142.1 155 45.8
gene15444 Selaginella moellendorffii HOM04x5M003062 ORTHO04x5M003442 9.0e-31 136.7 153 45.8
Pp3c2_570 Physcomitrium patens HOM04x5M003062 ORTHO04x5M003442 2.0e-30 135.6 200 41.5
Zjn_sc00002.1.g12320.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003062 ORTHO04x5M003442 5.8e-30 134.0 114 65.8
Zm00007a00045891 Zea mays B104 HOM04x5M003062 ORTHO04x5M003442 1.3e-29 132.9 114 64.0
gene9944 Selaginella moellendorffii HOM04x5M003062 ORTHO04x5M003442 2.2e-29 132.1 155 44.5
gene14254 Selaginella moellendorffii HOM04x5M003062 ORTHO04x5M003442 6.5e-29 130.6 174 40.8
ATR0661G393 Amborella trichopoda HOM04x5M003062 ORTHO04x5M003442 1.4e-28 129.4 164 44.5
Pp3c14_24180 Physcomitrium patens HOM04x5M003062 ORTHO04x5M003442 5.5e-28 127.5 151 43.0
Pp3c1_40630 Physcomitrium patens HOM04x5M003062 ORTHO04x5M003442 3.5e-27 124.8 152 44.1
Aco027878 Ananas comosus HOM04x5M003062 ORTHO04x5M003442 3.7e-24 114.8 80 71.2
Sspon.01G0009260-1A Saccharum spontaneum HOM04x5M003925 ORTHO04x5M005853 2.4e-23 112.1 73 82.2
Zm00001d038935 Zea mays B73 HOM04x5M003062 ORTHO04x5M003442 2.4e-23 112.1 66 83.3
PAB00030632 Picea abies HOM04x5M003062 ORTHO04x5M003442 8.7e-18 93.6 101 48.5
Bradi1g21840 Brachypodium distachyon HOM04x5M003062 ORTHO04x5M003442 2.5e-17 92.0 97 58.8
Pgl_GLEAN_10026818 Cenchrus americanus HOM04x5M003062 ORTHO04x5M003442 2.5e-17 92.0 70 70.0
Pp3c17_23280 Physcomitrium patens HOM04x5M003062 ORTHO04x5M003442 2.2e-16 89.0 111 42.3
Zjn_sc00002.1.g12310.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M003062 ORTHO04x5M003442 1.3e-13 79.7 47 80.9
PAB00010919 Picea abies HOM04x5M003062 ORTHO04x5M003442 6.5e-13 77.4 93 44.1
Sspon.08G0019540-1B Saccharum spontaneum HOM04x5M000372 ORTHO04x5M010053 2.7e-11 72.0 45 73.3
MCO15G178 Micromonas commoda HOM04x5M003062 ORTHO04x5M003442 3.7e-08 61.6 144 28.5
PAB00010920 Picea abies HOM04x5M003062 ORTHO04x5M003442 5.3e-07 57.8 84 38.1

Amborella trichopoda (2 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (4 genes)
Picea abies (4 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (2 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (3 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (3 genes)