Interactive Phylogenetics Module

Gene Id
TraesCS3D02G383300

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TraesCS3D02G383300 Triticum aestivum HOM04x5M006508 ORTHO04x5M008138 1.2e-223 778.9 626 100.0
TraesCS3B02G422500 Triticum aestivum HOM04x5M006508 ORTHO04x5M008138 1.1e-197 692.6 618 89.6
TRITD3Bv1G217000 Triticum turgidum HOM04x5M006508 ORTHO04x5M008138 1.1e-197 692.6 618 89.6
TraesCS3A02G390700 Triticum aestivum HOM04x5M006508 ORTHO04x5M008138 9.8e-194 679.5 626 89.9
TRITD3Av1G230630 Triticum turgidum HOM04x5M006508 ORTHO04x5M008138 9.8e-194 679.5 626 89.9
HORVU3Hr1G088470 Hordeum vulgare HOM04x5M006508 ORTHO04x5M008138 1.7e-145 519.2 422 84.1
Bradi4g39100 Brachypodium distachyon HOM04x5M006508 ORTHO04x5M008138 5.0e-129 464.5 424 77.1
PH01000574G0030 Phyllostachys edulis HOM04x5M006508 ORTHO04x5M008138 5.5e-120 434.5 426 70.4
LP032902 Lolium perenne HOM04x5M006508 ORTHO04x5M008138 9.4e-120 433.7 428 66.8
OsR498G1221321500.01 Oryza sativa ssp. indica HOM04x5M006508 ORTHO04x5M008138 1.8e-115 419.5 318 83.3
MisinT432500 Miscanthus sinensis HOM04x5M006508 ORTHO04x5M008138 3.8e-113 411.8 432 67.4
OB12G17480 Oryza brachyantha HOM04x5M006508 ORTHO04x5M008138 5.0e-113 411.4 346 77.7
LOC_Os12g18640 Oryza sativa ssp. japonica HOM04x5M006508 ORTHO04x5M008138 4.2e-112 408.3 322 81.4
Oropetium_20150105_28240 Oropetium thomaeum HOM04x5M006508 ORTHO04x5M008138 2.2e-100 369.4 431 65.7
Oropetium_20150105_17415 Oropetium thomaeum HOM04x5M006508 ORTHO04x5M008138 2.2e-100 369.4 431 65.7
Seita.3G308800 Setaria italica HOM04x5M006508 ORTHO04x5M008138 2.2e-100 369.4 434 66.4
Pgl_GLEAN_10030319 Cenchrus americanus HOM04x5M006508 ORTHO04x5M008138 8.3e-100 367.5 321 71.7
Sspon.08G0017860-1B Saccharum spontaneum HOM04x5M006508 ORTHO04x5M008138 2.3e-89 332.8 435 63.2
Sobic.010G249700 Sorghum bicolor HOM04x5M006508 ORTHO04x5M008138 2.9e-89 332.4 443 62.1
Sspon.08G0017860-2D Saccharum spontaneum HOM04x5M006508 ORTHO04x5M008138 1.0e-86 323.9 346 66.2
Aco003547 Ananas comosus HOM04x5M006508 ORTHO04x5M008138 3.0e-86 322.4 350 65.7
Misin19G240100 Miscanthus sinensis HOM04x5M006508 ORTHO04x5M008138 2.8e-84 315.8 194 76.8
Zm00001d036489 Zea mays B73 HOM04x5M006508 ORTHO04x5M008138 6.3e-84 314.7 430 58.6
p5.00_sc00073_p0010 Elaeis guineensis HOM04x5M006508 ORTHO04x5M008138 1.8e-83 313.2 348 62.9
Zm00008a024482 Zea mays PH207 HOM04x5M006508 ORTHO04x5M008138 2.4e-83 312.8 427 58.5
Solyc02g093620.1 Solanum lycopersicum HOM04x5M006508 ORTHO04x5M008138 1.6e-82 310.1 324 65.4
Zm00007a00024341 Zea mays B104 HOM04x5M006508 ORTHO04x5M008138 1.3e-81 307.0 343 66.2
Ma03_g17830 Musa acuminata HOM04x5M006508 ORTHO04x5M008138 1.4e-78 297.0 348 62.1
Zosma95g00700 Zostera marina HOM04x5M006508 ORTHO04x5M008138 1.4e-75 287.0 521 66.0
ASH_gene9328 Apostasia shenzhenica HOM04x5M006508 ORTHO04x5M008138 7.0e-75 284.6 318 61.3
AT3G46610 Arabidopsis thaliana HOM04x5M006508 ORTHO04x5M008138 1.6e-74 283.5 345 55.7
PEQU_20058 Phalaenopsis equestris HOM04x5M006508 ORTHO04x5M008138 1.6e-74 283.5 321 60.4
CALSI_Maker00021003 Calamus simplicifolius HOM04x5M006508 ORTHO04x5M008138 2.8e-71 272.7 305 64.9
Potri.017G070800 Populus trichocarpa HOM04x5M006508 ORTHO04x5M008138 1.7e-68 263.5 322 61.2
ATR0824G256 Amborella trichopoda HOM04x5M006508 ORTHO04x5M008138 4.9e-68 261.9 319 60.2
Spipo0G0122900 Spirodela polyrhiza HOM04x5M006508 ORTHO04x5M008138 1.1e-67 260.8 318 59.7
evm.TU.AsparagusV1_09.1240.V1.1 Asparagus officinalis HOM04x5M006508 ORTHO04x5M008138 4.4e-61 238.8 322 57.5
GSVIVG01003980001 Vitis vinifera HOM04x5M006508 ORTHO04x5M008138 4.9e-36 155.6 284 36.6
Pp3c26_10760 Physcomitrium patens HOM04x5M006508 ORTHO04x5M008138 4.3e-32 142.5 320 46.9
Oropetium_20150105_10579 Oropetium thomaeum HOM04x5M006508 ORTHO04x5M008138 6.0e-26 122.1 83 66.3
CALSI_Maker00017273 Calamus simplicifolius HOM04x5M006508 ORTHO04x5M008138 8.7e-25 118.2 90 61.1
gene989 Selaginella moellendorffii HOM04x5M006508 ORTHO04x5M008138 4.3e-24 115.9 205 35.1
gene7581 Selaginella moellendorffii HOM04x5M006508 ORTHO04x5M008138 1.3e-23 114.4 209 34.4
Mapoly0038s0061 Marchantia polymorpha HOM04x5M006508 ORTHO04x5M008138 7.9e-18 95.1 137 38.0
PH01000465G0610 Phyllostachys edulis HOM04x5M002034 ORTHO04x5M002355 7.4e-16 88.6 64 73.4
CALSI_Maker00017287 Calamus simplicifolius HOM04x5M006508 ORTHO04x5M008138 5.3e-06 55.8 62 43.5

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (3 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (1 genes)
Picea abies (0 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (2 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings