Interactive Phylogenetics Module

Gene Id
TraesCS3B02G235600

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TraesCS3B02G235600 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 3425.6 1905 100.0
TRITD3Bv1G121350 Triticum turgidum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 3419.0 1905 99.8
TraesCS3D02G211100 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 3253.8 1905 96.0
TRITD3Av1G132070 Triticum turgidum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 3207.5 1905 94.8
TraesCS3A02G208200 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 3201.8 1905 94.7
LP037312 Lolium perenne HOM04x5M002407 ORTHO04x5M002528 0.0e+00 2620.9 1929 76.8
PH01000633G0070 Phyllostachys edulis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 2426.7 2075 71.1
PH01004832G0100 Phyllostachys edulis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 2383.6 1949 74.0
OB01G30180 Oryza brachyantha HOM04x5M002407 ORTHO04x5M002528 0.0e+00 2149.0 1944 68.0
Seita.5G259200 Setaria italica HOM04x5M002407 ORTHO04x5M002528 0.0e+00 2041.2 1959 66.6
Pgl_GLEAN_10014164 Cenchrus americanus HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1966.8 1969 62.5
Misin06G171000 Miscanthus sinensis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1961.0 1944 65.0
Bradi2g41720 Brachypodium distachyon HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1944.5 1451 74.4
OsR498G0815305000.01 Oryza sativa ssp. indica HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1902.1 1578 66.8
Zm00008a014469 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1892.1 1943 61.0
Sobic.003G196300 Sorghum bicolor HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1885.9 1945 63.3
Zm00008a014468 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1864.4 1951 60.3
Zm00007a00016337 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1836.6 1900 59.7
Sspon.03G0012710-2B Saccharum spontaneum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1814.7 1857 63.3
Zjn_sc00021.1.g01830.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1770.7 1947 58.5
Oropetium_20150105_19585 Oropetium thomaeum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1735.7 1884 57.6
Zm00001d044281 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1512.3 1831 55.7
Bradi2g14375 Brachypodium distachyon HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1493.8 1949 52.4
LP009998 Lolium perenne HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1456.8 1907 49.4
PH01000391G0300 Phyllostachys edulis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1446.4 1927 52.9
Misin16G251200 Miscanthus sinensis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1442.9 1954 49.4
p5.00_sc00199_p0017 Elaeis guineensis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1404.0 1992 48.3
Sobic.009G256300 Sorghum bicolor HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1401.3 1953 49.1
Seita.3G121600 Setaria italica HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1343.6 1949 47.8
OB05G35500 Oryza brachyantha HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1325.8 1949 47.9
TraesCS1A02G439500 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1324.7 1891 49.3
TraesCS1D02G448700 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1324.3 1895 49.8
TRITD1Bv1G226860 Triticum turgidum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1322.4 1895 48.0
Aco022002 Ananas comosus HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1312.4 1981 51.4
Zm00001d044283 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1307.4 1485 55.5
Pgl_GLEAN_10003768 Cenchrus americanus HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1303.5 1954 47.5
TraesCS1B02G474800 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1302.0 1893 47.8
Ma01_g14420 Musa acuminata HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1234.2 1965 45.5
p5.00_sc00074_p0086 Elaeis guineensis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1203.0 1780 47.4
Misin17G265800 Miscanthus sinensis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1194.5 1478 49.3
Ma11_g11890 Musa acuminata HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1150.6 1959 43.7
evm.TU.AsparagusV1_01.2274.V1.1 Asparagus officinalis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1128.2 1964 44.3
PEQU_06129 Phalaenopsis equestris HOM04x5M002407 ORTHO04x5M002528 2.1e-311 1072.0 2026 43.0
ASH_gene3664 Apostasia shenzhenica HOM04x5M002407 ORTHO04x5M002528 2.2e-305 1052.0 2005 41.8
LOC_Os08g08000 Oryza sativa ssp. japonica HOM04x5M002407 ORTHO04x5M002528 7.9e-303 1043.5 858 75.8
evm.TU.AsparagusV1_06.828.V1.1 Asparagus officinalis HOM04x5M002407 ORTHO04x5M002528 2.2e-276 955.7 1883 42.1
TRITD1Av1G228790 Triticum turgidum HOM04x5M002407 ORTHO04x5M002528 1.9e-256 889.4 1184 48.2
Potri.002G243400 Populus trichocarpa HOM04x5M002407 ORTHO04x5M002528 4.8e-252 874.8 1998 38.3
GSVIVG01028685001 Vitis vinifera HOM04x5M002407 ORTHO04x5M002528 8.3e-252 874.0 1597 40.2
Sspon.03G0012710-1A Saccharum spontaneum HOM04x5M002407 ORTHO04x5M002528 6.1e-247 857.8 818 69.6
PH01000410G0660 Phyllostachys edulis HOM04x5M002407 ORTHO04x5M002528 9.2e-243 844.0 1000 51.6
Potri.014G189900 Populus trichocarpa HOM04x5M002407 ORTHO04x5M002528 2.8e-239 832.4 1579 39.5
Zm00001d009750 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 6.4e-236 821.2 1141 51.7
AT3G24880 Arabidopsis thaliana HOM04x5M002407 ORTHO04x5M002528 4.7e-231 805.1 1575 38.5
Spipo6G0019000 Spirodela polyrhiza HOM04x5M002407 ORTHO04x5M002528 2.2e-228 796.2 1529 39.0
AT3G24870 Arabidopsis thaliana HOM04x5M002407 ORTHO04x5M002528 1.1e-227 793.9 1595 38.2
Solyc06g083420.1 Solanum lycopersicum HOM04x5M002407 ORTHO04x5M002528 3.3e-224 782.3 1593 38.1
Zm00007a00045663 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 2.1e-215 753.1 1112 50.1
Solyc09g060080.2 Solanum lycopersicum HOM04x5M002407 ORTHO04x5M002528 2.9e-212 742.7 1604 37.0
Zosma2g02260 Zostera marina HOM04x5M002407 ORTHO04x5M002528 1.5e-192 677.2 1969 34.6
Oropetium_20150105_04068 Oropetium thomaeum HOM04x5M002407 ORTHO04x5M002528 7.4e-160 568.5 1002 40.7
Zosma44g00240 Zostera marina HOM04x5M002407 ORTHO04x5M002528 2.8e-159 566.6 1917 32.4
Zm00007a00016339 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 2.0e-152 543.9 659 54.5
CALSI_Maker00041609 Calamus simplicifolius HOM04x5M002407 ORTHO04x5M002528 1.1e-142 511.5 947 40.8
OsR498G0511447400.01 Oryza sativa ssp. indica HOM04x5M002407 ORTHO04x5M002528 5.0e-132 476.1 768 43.4
Aco029545 Ananas comosus HOM04x5M002407 ORTHO04x5M002528 4.3e-123 446.4 1278 32.0
Aco011807 Ananas comosus HOM04x5M002407 ORTHO04x5M002528 8.9e-121 438.7 1450 30.6
Zm00007a00039067 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 2.5e-115 420.6 801 39.0
LOC_Os05g51550 Oryza sativa ssp. japonica HOM04x5M002407 ORTHO04x5M002528 7.5e-112 409.1 720 49.6
Zm00008a030915 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 1.3e-100 371.7 459 49.2
Zm00001d009751 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 5.1e-100 369.8 806 36.8
Zm00007a00045515 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 8.4e-95 352.4 423 57.2
Zm00001d044284 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 3.5e-93 347.1 469 57.6
Zm00007a00016338 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 3.5e-93 347.1 285 65.3
Zjn_sc00036.1.g03870.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002407 ORTHO04x5M002528 4.0e-89 333.6 1038 31.8
ATR0796G143 Amborella trichopoda HOM04x5M002407 ORTHO04x5M002528 1.7e-79 301.6 378 48.1
Sspon.07G0000180-1A Saccharum spontaneum HOM04x5M002407 ORTHO04x5M002528 6.0e-77 293.1 297 55.6
Mapoly0075s0051 Marchantia polymorpha HOM04x5M002407 ORTHO04x5M002528 5.1e-76 290.0 1663 26.6
gene29448 Selaginella moellendorffii HOM04x5M002407 ORTHO04x5M002528 7.4e-75 286.2 955 30.4
gene19536 Selaginella moellendorffii HOM04x5M002407 ORTHO04x5M002528 1.1e-73 282.3 1109 28.9
Zm00008a030914 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 2.4e-73 281.2 549 50.3
PAB00036669 Picea abies HOM04x5M002407 ORTHO04x5M002528 1.0e-68 265.8 1055 29.6
CALSI_Maker00029449 Calamus simplicifolius HOM04x5M002407 ORTHO04x5M002528 4.8e-66 256.9 347 48.7
Pp3c26_13270 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 3.3e-51 207.6 1578 26.0
Pp3c26_13274 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 3.3e-51 207.6 1578 26.0
ATR0618G010 Amborella trichopoda HOM04x5M002407 ORTHO04x5M002528 1.3e-50 205.7 870 29.0
Pp3c7_10800 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 3.4e-48 197.6 1014 27.3
Zm00008a030916 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 2.5e-46 191.4 541 32.7
Pp3c4_31630 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 5.5e-46 190.3 966 26.9
ATR0796G038 Amborella trichopoda HOM04x5M002407 ORTHO04x5M002528 2.1e-45 188.3 702 29.6
PAB00026248 Picea abies HOM04x5M002407 ORTHO04x5M002528 2.4e-41 174.9 138 62.3
Pp3c26_13463 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 7.7e-40 169.9 1605 25.6
Pp3c26_13460 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 7.7e-40 169.9 1605 25.6
PAB00055384 Picea abies HOM04x5M002407 ORTHO04x5M002528 1.1e-35 156.0 273 42.9
Zm00007a00024214 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 5.0e-31 140.6 283 39.9
ATR0796G299 Amborella trichopoda HOM04x5M002407 ORTHO04x5M002528 1.7e-23 115.5 253 39.1
gene37402 Selaginella moellendorffii HOM04x5M002407 ORTHO04x5M027836 1.8e-20 105.5 197 35.0
gene28281 Selaginella moellendorffii HOM04x5M002407 ORTHO04x5M027836 1.8e-20 105.5 197 35.0
Oropetium_20150105_04067 Oropetium thomaeum HOM04x5M002407 ORTHO04x5M002528 5.2e-20 104.0 65 72.3
PAB00012890 Picea abies HOM04x5M002407 ORTHO04x5M002528 8.6e-15 86.7 77 61.0
Cre13.g605800 Chlamydomonas reinhardtii HOM04x5M002407 ORTHO04x5M002528 2.2e-10 72.0 184 28.8
Oropetium_20150105_04065 Oropetium thomaeum HOM04x5M002407 ORTHO04x5M002528 2.0e-08 65.5 271 29.9
Oropetium_20150105_04066 Oropetium thomaeum HOM04x5M002407 ORTHO04x5M002528 5.0e-07 60.8 56 55.4
PAB00019957 Picea abies HOM04x5M002407 ORTHO04x5M002528 6.6e-07 60.5 146 37.7
Mapoly0111s0052 Marchantia polymorpha HOM04x5M000092 ORTHO04x5M004291 8.6e-07 60.1 132 31.8

Amborella trichopoda (4 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (0 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (5 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (6 genes)
Picea abies (5 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (3 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (2 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (6 genes)
Triticum turgidum (4 genes)
Vitis vinifera (1 genes)
Zea mays B73 (5 genes)
Zea mays B104 (7 genes)
Zea mays PH207 (5 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings