Interactive Phylogenetics Module

Gene Id
TraesCS1D02G093800

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TraesCS1D02G093800 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.0e-260 901.7 537 100.0
TraesCS1B02G112600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.4e-257 891.3 537 98.9
TRITD1Bv1G044830 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.4e-257 891.3 537 98.9
TRITD1Av1G041990 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 2.7e-248 860.5 537 96.5
LP007813 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 2.4e-209 731.1 456 86.4
Bradi2g36005 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 1.4e-204 715.3 567 81.8
TraesCS1A02G102200 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 9.3e-201 702.6 386 95.6
Seita.3G038900 Setaria italica HOM04x5M001523 ORTHO04x5M001589 1.3e-162 575.9 583 69.5
Misin17G049700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.0e-159 566.2 571 70.6
Misin16G054100 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 8.8e-159 563.1 583 69.3
Sspon.07G0013220-1T Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.1e-158 562.8 585 69.2
Sspon.07G0013220-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 6.3e-157 557.0 580 69.0
LOC_Os05g05580 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 5.0e-154 547.4 471 65.8
Sobic.009G042800 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 1.6e-152 542.3 586 67.1
Zm00007a00006561 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 1.5e-150 535.8 576 67.5
Oropetium_20150105_15532 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 2.6e-142 508.4 579 66.7
Zm00008a037492 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 8.3e-141 503.4 458 64.4
Sspon.07G0013220-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.2e-136 489.6 578 64.7
OB05G13160 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 3.9e-122 441.4 409 63.1
evm.TU.AsparagusV1_02.2052.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 1.9e-97 359.4 459 49.7
Aco007293 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 1.5e-89 333.2 450 46.7
Solyc03g118390.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 2.1e-80 302.8 451 44.8
Pgl_GLEAN_10003497 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.5e-78 296.6 276 65.9
ATR0706G100 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 1.6e-72 276.6 245 58.0
Seita.8G134100 Setaria italica HOM04x5M001523 ORTHO04x5M001589 8.2e-72 274.2 440 42.0
TraesCS4A02G192600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.4e-71 273.5 431 42.2
TRITD4Av1G154160 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 4.0e-71 271.9 375 45.3
HORVU4Hr1G023390 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 9.0e-71 270.8 385 44.4
TraesCS4B02G122700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 2.0e-70 269.6 426 41.3
p5.00_sc01766_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 2.6e-70 269.2 241 58.5
AT4G08630 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 4.5e-70 268.5 283 50.9
TraesCS4D02G120700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 7.6e-70 267.7 426 41.1
ATR0582G200 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 1.3e-69 266.9 245 58.0
Ma02_g03510 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 1.3e-69 266.9 459 40.5
Misin10G109400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.3e-69 266.9 439 41.0
Bradi4g17917 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 1.7e-69 266.5 441 41.3
LP038183 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 1.7e-69 266.5 405 42.5
TRITD4Bv1G050480 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.7e-69 266.5 421 41.1
Ma09_g01020 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 3.8e-69 265.4 434 41.5
Misin09G134700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 3.8e-69 265.4 430 39.8
Oropetium_20150105_21536 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 4.9e-69 265.0 466 39.7
Sobic.005G129400 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 4.9e-69 265.0 437 39.8
GSVIVG01004935001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 1.4e-68 263.5 453 40.4
Zosma69g00810 Zostera marina HOM04x5M001523 ORTHO04x5M001589 1.4e-68 263.5 438 40.9
GSVIVG01008631001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 1.9e-68 263.1 269 55.4
LOC_Os11g31950 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 4.2e-68 261.9 431 41.8
PEQU_08641 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 9.3e-68 260.8 280 51.8
OB11G21770 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 1.2e-67 260.4 434 40.3
Pp3c19_10380 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 2.1e-67 259.6 448 39.1
Potri.015G104600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 2.7e-67 259.2 267 53.9
p5.00_sc00057_p0063 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 3.5e-67 258.8 247 55.9
Potri.001G065800 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 3.5e-67 258.8 270 51.9
Aco015077 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 4.6e-67 258.5 251 55.0
Potri.012G105400 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 7.9e-67 257.7 272 52.2
gene4642 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 7.9e-67 257.7 242 55.8
gene16812 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 1.8e-66 256.5 242 55.4
Ma04_g00060 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 2.3e-66 256.1 236 58.1
Zm00001d049273 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 1.1e-65 253.8 437 40.0
Zm00007a00011305 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 1.9e-65 253.1 433 40.2
ASH_gene19761 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 2.5e-65 252.7 272 52.6
PEQU_07858 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 2.5e-65 252.7 243 56.0
Aco027227 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 4.3e-65 251.9 374 43.0
LOC_Os01g70320 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 2.2e-64 249.6 241 54.4
Sspon.03G0027700-2C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 2.2e-64 249.6 221 57.9
LP009590 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 2.8e-64 249.2 231 56.7
Potri.005G044600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 2.8e-64 249.2 229 55.9
Zosma27g00300 Zostera marina HOM04x5M001523 ORTHO04x5M001589 1.1e-63 247.3 231 55.8
Spipo4G0061800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 3.1e-63 245.7 236 55.9
Bradi2g59510 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 4.1e-63 245.4 230 56.1
Sobic.003G412300 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 5.3e-63 245.0 232 55.2
Misin06G371400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 9.0e-63 244.2 234 54.7
OB01G51640 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 9.0e-63 244.2 236 55.1
TraesCS3B02G476100 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 9.0e-63 244.2 242 54.5
Misin05G403900 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.2e-62 243.8 232 55.6
Pp3c22_21290 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 1.2e-62 243.8 242 52.5
Pp3c22_21255 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 1.2e-62 243.8 242 52.5
Sspon.03G0027700-1P Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 2.6e-62 242.7 211 59.2
TRITD3Bv1G242080 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 2.6e-62 242.7 246 53.7
TraesCS3D02G435000 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 4.5e-62 241.9 235 55.7
AT3G48860 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 5.9e-62 241.5 270 50.0
HORVU3Hr1G096450 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 5.9e-62 241.5 233 56.2
TraesCS3A02G442300 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 5.9e-62 241.5 240 55.0
TRITD3Av1G250250 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 5.9e-62 241.5 240 55.0
Aco006674 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 2.9e-61 239.2 262 50.4
Oropetium_20150105_09846 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 2.9e-61 239.2 227 53.3
Seita.5G438400 Setaria italica HOM04x5M001523 ORTHO04x5M001589 3.8e-61 238.8 232 55.6
Pp3c19_9680 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 5.0e-61 238.4 244 53.7
Potri.003G164100 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 5.0e-61 238.4 439 39.2
AT4G25070 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 6.5e-61 238.0 238 51.7
Pgl_GLEAN_10004734 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.1e-60 237.3 377 40.8
Zm00001d024833 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 2.5e-60 236.1 369 62.6
Sspon.06G0014630-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 4.2e-60 235.3 487 36.6
Sspon.06G0014630-4D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 9.4e-60 234.2 419 36.8
CALSI_Maker00037144 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 2.7e-59 232.6 315 45.1
AT5G13260 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 6.1e-59 231.5 271 48.7
Mapoly0101s0059 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 1.4e-58 230.3 231 51.9
Sspon.06G0014630-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.8e-58 229.9 425 37.4
AT5G23700 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 6.7e-58 228.0 235 54.0
Sspon.06G0014630-3C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.5e-57 226.9 417 37.2
CALSI_Maker00018832 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 3.1e-55 219.2 505 34.9
CALSI_Maker00048189 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 5.9e-54 214.9 220 55.0
CALSI_Maker00016663 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 5.5e-52 208.4 258 47.3
Spipo7G0049800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 1.2e-51 207.2 236 48.7
Zjn_sc00009.1.g01850.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 7.4e-49 198.0 215 48.4
GSVIVG01021962001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 4.8e-48 195.3 200 52.5
Sspon.07G0013220-3D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.4e-47 193.7 363 58.1
PH01000002G3240 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 1.3e-45 187.2 211 50.2
Zosma5g01040 Zostera marina HOM04x5M001523 ORTHO04x5M001589 3.0e-42 176.0 216 44.4
PAB00042674 Picea abies HOM04x5M001523 ORTHO04x5M001589 8.2e-40 167.9 168 57.7
OsR498G1120235900.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 2.4e-39 166.4 327 39.8
Zm00007a00002495 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 9.1e-39 164.5 227 45.4
Pgl_GLEAN_10000952 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.2e-38 164.1 165 52.7
Zm00008a012853 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 7.7e-38 161.4 172 51.2
Mapoly0013s0021 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 1.7e-37 160.2 222 39.6
OsR498G0509736400.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 8.0e-35 151.4 115 69.6
PH01000258G0390 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 8.0e-35 151.4 142 65.5
p5.00_sc00211_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 1.0e-34 151.0 208 44.7
Solyc10g037930.1 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 4.8e-32 142.1 120 62.5
PEQU_04259 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 2.2e-29 133.3 148 54.7
evm.TU.AsparagusV1_09.1475.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 3.2e-28 129.4 114 57.0
Zjn_sc00034.1.g02320.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 4.2e-28 129.0 143 46.9
evm.TU.AsparagusV1_04.1549.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 4.0e-26 122.5 142 50.7
Zm00001d042262 Zea mays B73 HOM04x5M000360 ORTHO04x5M000256 3.4e-25 119.4 254 33.1
Zjn_sc00186.1.g00130.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 1.8e-23 113.6 169 38.5
Pgl_GLEAN_10000785 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 9.1e-23 111.3 86 58.1
Solyc05g023770.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 1.2e-19 100.9 271 32.8
evm.TU.AsparagusV1_Unassigned.393.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 5.2e-18 95.5 65 67.7
ASH_gene8570 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 1.5e-17 94.0 111 50.5
ASH_gene8571 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M016727 1.2e-14 84.3 117 53.8
p5.00_sc00211_p0002 Elaeis guineensis HOM04x5M001523 ORTHO04x5M016727 1.1e-12 77.8 122 48.4
PH01002160G0250 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 1.5e-12 77.4 57 57.9
MCO12G428 Micromonas commoda HOM04x5M001523 ORTHO04x5M001589 4.3e-12 75.9 372 25.5
PH01002160G0270 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 7.3e-12 75.1 95 46.3
ASH_gene8524 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 4.7e-11 72.4 85 47.1
PAB00006093 Picea abies HOM04x5M001523 ORTHO04x5M001589 8.0e-11 71.6 59 54.2
Aco021763 Ananas comosus HOM04x5M001523 ORTHO04x5M009652 6.8e-10 68.6 61 52.5
Aco028088 Ananas comosus HOM04x5M000382 ORTHO04x5M000270 1.2e-09 67.8 48 58.3
Cre03.g161578 Chlamydomonas reinhardtii HOM04x5M001523 ORTHO04x5M001589 1.5e-09 67.4 281 23.1
PAB00048619 Picea abies HOM04x5M001523 ORTHO04x5M001589 9.8e-09 64.7 107 38.3
GSVIVG01021965001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 4.9e-08 62.4 84 44.0
CALSI_Maker00048187 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M016727 9.2e-07 58.2 86 47.7
PH01083440G0010 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 9.2e-07 58.2 43 62.8
OsR498G0102629600.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 7.8e-06 55.1 37 64.9

Amborella trichopoda (2 genes)
Ananas comosus (6 genes)
Apostasia shenzhenica (4 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (5 genes)
Cenchrus americanus (4 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (4 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (4 genes)
Picea abies (3 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (4 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (2 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

Program Settings