Interactive Phylogenetics Module

Gene Id
TRITD3Av1G230670

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TraesCS3A02G390900 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1519.6 839 100.0
TRITD3Av1G230670 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1519.6 839 100.0
TraesCS3B02G422700 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1511.1 839 99.5
TraesCS3D02G383500 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1498.0 839 98.5
HORVU3Hr1G088490 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1491.5 839 97.5
LP034954 Lolium perenne HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1459.5 839 93.6
HORVU3Hr1G088450 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1454.9 839 95.8
Bradi2g58070 Brachypodium distachyon HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1440.2 839 91.9
OB01G49770 Oryza brachyantha HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1407.9 840 89.5
TRITD3Bv1G217030 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1406.0 839 93.9
Oropetium_20150105_13133 Oropetium thomaeum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1399.0 837 87.5
Misin06G412700 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1383.6 843 87.7
Seita.5G420100 Setaria italica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1379.0 843 90.3
Misin06G362600 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1377.5 843 89.0
Sobic.003G394200 Sorghum bicolor HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1375.1 839 90.1
OsR498G0102540800.01 Oryza sativa ssp. indica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1361.3 823 91.1
Sspon.03G0000770-1A Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1351.7 839 88.7
Sspon.03G0000770-4D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1331.2 839 87.6
Zm00008a013008 Zea mays PH207 HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1315.4 852 85.4
p5.00_sc00079_p0034 Elaeis guineensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1314.7 839 84.1
Aco018477 Ananas comosus HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1313.9 842 84.0
Sspon.03G0045090-1D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1312.7 876 83.9
Zm00001d042451 Zea mays B73 HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1311.6 858 84.5
Ma09_g26670 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1303.1 839 83.0
Pgl_GLEAN_10010470 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1293.9 863 84.0
CALSI_Maker00040564 Calamus simplicifolius HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1291.9 839 82.6
evm.TU.AsparagusV1_07.3477.V1.1 Asparagus officinalis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1288.5 839 82.4
ASH_gene16649 Apostasia shenzhenica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1265.0 841 81.2
Ma06_g32990 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1247.3 840 80.0
Zosma30g00970 Zostera marina HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1216.4 841 79.4
Potri.016G023000 Populus trichocarpa HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1214.5 840 76.1
PH01000031G1260 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1213.7 868 79.8
GSVIVG01016094001 Vitis vinifera HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1211.8 841 78.1
ATR1098G037 Amborella trichopoda HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1204.1 844 76.1
Solyc04g049490.2 Solanum lycopersicum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1202.2 843 75.0
Spipo16G0007900 Spirodela polyrhiza HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1160.6 855 72.2
AT1G50500 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1131.7 851 69.9
Zm00007a00032775 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1123.2 710 86.2
Sspon.03G0000770-3C Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 3.8e-310 1066.6 649 89.1
Mapoly0030s0152 Marchantia polymorpha HOM04x5M004483 ORTHO04x5M005884 1.2e-284 981.9 856 61.9
Sspon.03G0000770-2B Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 9.8e-282 972.2 839 69.0
Pp3c8_8190 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 1.9e-264 914.8 843 57.9
gene23001 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 7.1e-264 912.9 853 57.7
gene24646 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 7.1e-264 912.9 853 57.7
Pp3c24_4920 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 4.3e-261 903.7 847 57.4
Zjn_sc00034.1.g03870.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 3.7e-220 767.7 837 59.7
PH01000229G0300 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 3.7e-212 741.1 652 66.9
LOC_Os01g67880 Oryza sativa ssp. japonica HOM04x5M004483 ORTHO04x5M005884 1.5e-184 649.4 404 89.6
PEQU_14398 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 7.3e-168 594.0 407 78.9
MCO12G450 Micromonas commoda HOM04x5M004483 ORTHO04x5M005884 2.7e-130 469.2 779 38.3
PEQU_01746 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 1.2e-109 400.6 286 75.5
Zjn_sc00009.1.g03380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 5.1e-105 385.2 306 72.5
Cre06.g259600 Chlamydomonas reinhardtii HOM04x5M004483 ORTHO04x5M005884 1.6e-98 363.6 806 30.9
AT1G50970 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 5.3e-94 348.6 817 35.9
Misin11G134900 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 7.5e-80 301.6 182 89.0
Zm00007a00040839 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 3.0e-52 209.9 115 98.3
PAB00008915 Picea abies HOM04x5M004483 ORTHO04x5M005884 5.0e-44 182.6 117 76.1
PEQU_14397 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M021890 2.2e-39 167.2 136 66.9
PAB00059840 Picea abies HOM04x5M004483 ORTHO04x5M005884 6.4e-31 139.0 151 62.9
Zm00001d045865 Zea mays B73 HOM04x5M004483 ORTHO04x5M021890 9.3e-22 108.6 112 57.1
PAB00038035 Picea abies HOM04x5M004483 ORTHO04x5M021890 1.0e-20 105.1 155 45.8
Pgl_GLEAN_10023950 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 5.8e-16 89.4 48 97.9
evm.TU.AsparagusV1_01.70.V1.1 Asparagus officinalis HOM04x5M001647 ORTHO04x5M039403 1.5e-08 64.7 37 81.1
evm.TU.AsparagusV1_04.1246.V1.1 Asparagus officinalis HOM04x5M005851 ORTHO04x5M007066 3.4e-08 63.5 37 78.4

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings