Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.08G0014050-3D Saccharum spontaneum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1860.1 918 100.0
Misin18G054200 Miscanthus sinensis HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1743.8 980 89.8
Misin19G053300 Miscanthus sinensis HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1734.2 986 89.6
Sobic.010G051200 Sorghum bicolor HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1731.1 985 89.4
Seita.4G061900 Setaria italica HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1694.9 968 87.0
Zm00001d045217 Zea mays B73 HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1637.1 970 85.2
Zm00007a00012560 Zea mays B104 HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1592.8 970 83.4
LP004200 Lolium perenne HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1588.5 979 80.9
Bradi1g48447 Brachypodium distachyon HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1556.6 976 80.1
Pgl_GLEAN_10021946 Cenchrus americanus HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1555.0 814 92.5
TraesCS7A02G124000 Triticum aestivum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1542.3 950 79.7
TRITD7Av1G036750 Triticum turgidum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1538.9 932 80.6
OB06G13940 Oryza brachyantha HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1498.4 796 89.1
OsR498G0611674900.01 Oryza sativa ssp. indica HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1487.2 795 88.7
TraesCS7D02G121900 Triticum aestivum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1472.6 891 80.5
TraesCS7B02G022900 Triticum aestivum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1467.2 887 80.5
TRITD7Bv1G008650 Triticum turgidum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1467.2 887 80.5
Zm00008a033638 Zea mays PH207 HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1457.6 970 78.4
HORVU7Hr1G026040 Hordeum vulgare HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1415.6 770 87.7
Aco000336 Ananas comosus HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1394.8 949 70.8
Ma06_g07410 Musa acuminata HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1374.8 954 70.6
evm.TU.AsparagusV1_01.1548.V1.1 Asparagus officinalis HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1357.4 933 70.0
Sspon.08G0014050-1A Saccharum spontaneum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1352.4 697 95.1
p5.00_sc00001_p0398 Elaeis guineensis HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1337.8 937 70.5
CALSI_Maker00037724 Calamus simplicifolius HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1323.1 925 70.5
PEQU_13849 Phalaenopsis equestris HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1322.4 861 72.7
Spipo26G0004900 Spirodela polyrhiza HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1313.5 953 67.2
Oropetium_20150105_24055 Oropetium thomaeum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1308.5 764 83.4
ATR0315G070 Amborella trichopoda HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1300.0 927 67.9
AT5G19660 Arabidopsis thaliana HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1293.9 939 66.5
Solyc09g007300.1 Solanum lycopersicum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1273.8 938 66.2
Zosma11g00780 Zostera marina HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1262.3 938 66.0
GSVIVG01015382001 Vitis vinifera HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1257.7 794 75.6
Mapoly0155s0018 Marchantia polymorpha HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1169.5 985 59.5
gene19928 Selaginella moellendorffii HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1154.0 910 61.0
gene7073 Selaginella moellendorffii HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1151.7 905 61.1
LOC_Os06g06810 Oryza sativa ssp. japonica HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1112.4 597 87.1
Potri.018G081400 Populus trichocarpa HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1111.7 692 75.0
Pp3c3_30280 Physcomitrium patens HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1081.2 853 62.3
ASH_gene242 Apostasia shenzhenica HOM04x5M005913 ORTHO04x5M008336 3.8e-287 990.3 633 71.9
PAB00005731 Picea abies HOM04x5M005913 ORTHO04x5M008336 1.2e-277 958.7 632 70.9
Sspon.08G0014050-2B Saccharum spontaneum HOM04x5M005913 ORTHO04x5M008336 1.1e-273 945.7 460 98.5
MCO08G100 Micromonas commoda HOM04x5M005913 ORTHO04x5M008336 4.5e-256 887.1 822 54.3
PH01001174G0220 Phyllostachys edulis HOM04x5M005913 ORTHO04x5M008336 8.3e-250 866.3 460 87.6
Cre14.g628800 Chlamydomonas reinhardtii HOM04x5M005913 ORTHO04x5M008336 9.5e-238 826.2 721 55.2
Zjn_sc00049.1.g01300.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005913 ORTHO04x5M008336 1.7e-141 506.5 437 67.0
PAB00063078 Picea abies HOM04x5M005913 ORTHO04x5M008336 8.8e-50 201.8 232 47.0
HORVU7Hr1G026250 Hordeum vulgare HOM04x5M005913 ORTHO04x5M008336 1.1e-39 168.3 85 91.8
Oropetium_20150105_24057 Oropetium thomaeum HOM04x5M005913 ORTHO04x5M024518 3.8e-29 133.3 124 62.9
Pp3s169_40 Physcomitrium patens HOM04x5M005913 ORTHO04x5M000009 2.3e-21 107.5 248 35.1
HORVU7Hr1G026240 Hordeum vulgare HOM04x5M005913 ORTHO04x5M024518 5.0e-13 79.7 52 78.8
CALSI_Maker00027917 Calamus simplicifolius HOM04x5M000024 ORTHO04x5M000009 1.1e-10 72.0 332 25.9
CALSI_Maker00035029 Calamus simplicifolius HOM04x5M000024 ORTHO04x5M009222 4.4e-09 66.6 270 28.1
CALSI_Maker00027527 Calamus simplicifolius HOM04x5M000024 ORTHO04x5M000009 4.4e-09 66.6 270 28.1
Sspon.04G0023790-1B Saccharum spontaneum HOM04x5M000024 ORTHO04x5M000009 5.8e-09 66.2 289 25.6
OsR498G0714985300.01 Oryza sativa ssp. indica HOM04x5M000024 ORTHO04x5M000009 1.3e-08 65.1 213 26.3
LOC_Os07g48650 Oryza sativa ssp. japonica HOM04x5M000024 ORTHO04x5M000009 1.7e-08 64.7 213 26.3
TRITD6Av1G005580 Triticum turgidum HOM04x5M000024 ORTHO04x5M000009 1.7e-08 64.7 223 28.7
Solyc08g007600.1 Solanum lycopersicum HOM04x5M000024 ORTHO04x5M000009 2.2e-08 64.3 205 28.3
TraesCSU02G079100 Triticum aestivum HOM04x5M000024 ORTHO04x5M000009 2.9e-08 63.9 229 27.9
Sobic.004G289200 Sorghum bicolor HOM04x5M000024 ORTHO04x5M000009 4.9e-08 63.2 257 28.4
HORVU1Hr1G058290 Hordeum vulgare HOM04x5M000024 ORTHO04x5M000009 6.4e-08 62.8 209 25.8
Solyc08g007670.1 Solanum lycopersicum HOM04x5M000024 ORTHO04x5M000009 6.4e-08 62.8 207 28.5
Sspon.04G0006760-2D Saccharum spontaneum HOM04x5M000024 ORTHO04x5M000009 6.4e-08 62.8 153 31.4
TRITD6Bv1G007920 Triticum turgidum HOM04x5M000024 ORTHO04x5M000009 8.3e-08 62.4 295 27.5
OB07G28330 Oryza brachyantha HOM04x5M000024 ORTHO04x5M000009 1.1e-07 62.0 211 26.5
Solyc08g079990.1 Solanum lycopersicum HOM04x5M000024 ORTHO04x5M000009 1.4e-07 61.6 242 27.7
Bradi1g17345 Brachypodium distachyon HOM04x5M000024 ORTHO04x5M000009 1.9e-07 61.2 243 28.4
Seita.3G268000 Setaria italica HOM04x5M000024 ORTHO04x5M000009 1.9e-07 61.2 212 25.0
Solyc08g007620.1 Solanum lycopersicum HOM04x5M000024 ORTHO04x5M000009 1.9e-07 61.2 206 26.2
TRITD2Bv1G034110 Triticum turgidum HOM04x5M000024 ORTHO04x5M000009 1.9e-07 61.2 211 25.1
LOC_Os05g30580 Oryza sativa ssp. japonica HOM04x5M000024 ORTHO04x5M000009 2.4e-07 60.8 213 24.9
Potri.003G118700 Populus trichocarpa HOM04x5M000024 ORTHO04x5M000009 2.4e-07 60.8 208 27.9
TraesCS2B02G117100 Triticum aestivum HOM04x5M000024 ORTHO04x5M000009 2.4e-07 60.8 211 25.1
TRITD1Av1G154120 Triticum turgidum HOM04x5M000024 ORTHO04x5M000009 3.2e-07 60.5 203 26.1
Pgl_GLEAN_10007862 Cenchrus americanus HOM04x5M000024 ORTHO04x5M000009 4.1e-07 60.1 212 25.0
LP010764 Lolium perenne HOM04x5M000024 ORTHO04x5M000009 4.1e-07 60.1 207 24.6
Solyc08g079890.1 Solanum lycopersicum HOM04x5M000024 ORTHO04x5M000009 4.1e-07 60.1 223 25.6
Sspon.07G0009370-2B Saccharum spontaneum HOM04x5M000024 ORTHO04x5M000009 4.1e-07 60.1 211 25.6
ATR0099G077 Amborella trichopoda HOM04x5M000024 ORTHO04x5M000009 5.4e-07 59.7 205 26.8
Misin17G118500 Miscanthus sinensis HOM04x5M000024 ORTHO04x5M000009 5.4e-07 59.7 211 25.1
Potri.T004700 Populus trichocarpa HOM04x5M000024 ORTHO04x5M000009 5.4e-07 59.7 210 27.1
Solyc08g007700.1 Solanum lycopersicum HOM04x5M000024 ORTHO04x5M000009 5.4e-07 59.7 208 28.4
Solyc08g079860.1 Solanum lycopersicum HOM04x5M000024 ORTHO04x5M000009 5.4e-07 59.7 207 27.1
Sspon.01G0028620-2B Saccharum spontaneum HOM04x5M000024 ORTHO04x5M000009 5.4e-07 59.7 248 27.4
Cre02.g076950 Chlamydomonas reinhardtii HOM04x5M005913 ORTHO04x5M000009 7.0e-07 59.3 227 30.8
LP003157 Lolium perenne HOM04x5M000024 ORTHO04x5M000009 7.0e-07 59.3 203 26.1
LP034627 Lolium perenne HOM04x5M000024 ORTHO04x5M000009 7.0e-07 59.3 209 24.9
LP036218 Lolium perenne HOM04x5M000024 ORTHO04x5M000009 7.0e-07 59.3 203 25.6
Ma08_g11250 Musa acuminata HOM04x5M000024 ORTHO04x5M000009 7.0e-07 59.3 229 26.2
Seita.1G264200 Setaria italica HOM04x5M000024 ORTHO04x5M000009 7.0e-07 59.3 141 29.1
CALSI_Maker00013410 Calamus simplicifolius HOM04x5M000024 ORTHO04x5M000009 9.2e-07 58.9 137 31.4
CALSI_Maker00005053 Calamus simplicifolius HOM04x5M000024 ORTHO04x5M000009 9.2e-07 58.9 137 31.4
Sspon.06G0015930-1A Saccharum spontaneum HOM04x5M000024 ORTHO04x5M000009 9.2e-07 58.9 286 28.0
Sspon.04G0023790-2C Saccharum spontaneum HOM04x5M000024 ORTHO04x5M000009 9.2e-07 58.9 153 30.7
TraesCS1B02G246400 Triticum aestivum HOM04x5M000024 ORTHO04x5M000009 9.2e-07 58.9 287 24.4
TRITD1Bv1G139300 Triticum turgidum HOM04x5M000024 ORTHO04x5M000009 9.2e-07 58.9 287 24.4
GSVIVG01002783001 Vitis vinifera HOM04x5M000024 ORTHO04x5M000009 9.2e-07 58.9 140 30.0
evm.TU.AsparagusV1_04.2888.V1.1 Asparagus officinalis HOM04x5M000024 ORTHO04x5M000009 1.2e-06 58.5 212 26.4
TraesCS2D02G099600 Triticum aestivum HOM04x5M000024 ORTHO04x5M000009 1.2e-06 58.5 211 24.6
GSVIVG01024042001 Vitis vinifera HOM04x5M000024 ORTHO04x5M000009 1.2e-06 58.5 217 28.1
ATR0757G193 Amborella trichopoda HOM04x5M000024 ORTHO04x5M000009 1.6e-06 58.2 140 32.9
LP032177 Lolium perenne HOM04x5M000024 ORTHO04x5M000009 1.6e-06 58.2 210 26.7
Ma11_g03680 Musa acuminata HOM04x5M000024 ORTHO04x5M000009 1.6e-06 58.2 226 24.8
Misin16G122200 Miscanthus sinensis HOM04x5M000024 ORTHO04x5M000009 1.6e-06 58.2 211 25.1
Sobic.009G116300 Sorghum bicolor HOM04x5M000024 ORTHO04x5M000009 1.6e-06 58.2 211 25.1
Solyc08g079840.1 Solanum lycopersicum HOM04x5M000024 ORTHO04x5M000009 1.6e-06 58.2 223 24.7
Solyc08g079930.1 Solanum lycopersicum HOM04x5M000024 ORTHO04x5M000009 1.6e-06 58.2 208 26.9
TraesCS1A02G237900 Triticum aestivum HOM04x5M000024 ORTHO04x5M000009 1.6e-06 58.2 203 25.6
TraesCS6B02G040900 Triticum aestivum HOM04x5M000024 ORTHO04x5M000009 1.6e-06 58.2 223 24.2
Bradi2g27640 Brachypodium distachyon HOM04x5M000024 ORTHO04x5M000009 2.1e-06 57.8 203 24.1
Zm00008a025567 Zea mays PH207 HOM04x5M000024 ORTHO04x5M000009 2.1e-06 57.8 212 25.0
Spipo0G0034300 Spirodela polyrhiza HOM04x5M000024 ORTHO04x5M000009 2.7e-06 57.4 207 28.0
Zm00001d037890 Zea mays B73 HOM04x5M000024 ORTHO04x5M000009 2.7e-06 57.4 212 24.5
Zosma202g00320 Zostera marina HOM04x5M000024 ORTHO04x5M000009 2.7e-06 57.4 184 31.0
OB07G32290 Oryza brachyantha HOM04x5M000024 ORTHO04x5M000009 3.5e-06 57.0 212 24.5
PEQU_03949 Phalaenopsis equestris HOM04x5M000024 ORTHO04x5M000009 3.5e-06 57.0 207 25.1
Solyc08g079910.1 Solanum lycopersicum HOM04x5M000024 ORTHO04x5M000009 3.5e-06 57.0 207 25.6
Sspon.07G0009370-1A Saccharum spontaneum HOM04x5M000024 ORTHO04x5M000009 3.5e-06 57.0 211 25.1
GSVIVG01027586001 Vitis vinifera HOM04x5M000024 ORTHO04x5M000009 3.5e-06 57.0 270 25.6
ATR0180G034 Amborella trichopoda HOM04x5M000024 ORTHO04x5M000009 4.6e-06 56.6 153 26.1
Solyc08g080010.1 Solanum lycopersicum HOM04x5M000024 ORTHO04x5M000009 7.8e-06 55.8 254 27.2

Amborella trichopoda (4 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (6 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (2 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (4 genes)
Lolium perenne (6 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (2 genes)
Picea abies (2 genes)
Populus trichocarpa (3 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (12 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (7 genes)
Vitis vinifera (4 genes)
Zea mays B73 (2 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (1 genes)