Interactive Phylogenetics Module

Gene Id
Sspon.08G0014050-1A

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.08G0014050-1A Saccharum spontaneum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1574.3 758 100.0
Sobic.010G051200 Sorghum bicolor HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1445.3 739 95.1
Misin19G053300 Miscanthus sinensis HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1441.4 739 95.0
Misin18G054200 Miscanthus sinensis HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1435.2 739 94.5
Seita.4G061900 Setaria italica HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1381.3 749 89.6
Pgl_GLEAN_10021946 Cenchrus americanus HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1368.2 772 87.0
Sspon.08G0014050-3D Saccharum spontaneum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1355.1 697 95.1
Zm00001d045217 Zea mays B73 HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1344.7 699 93.4
OB06G13940 Oryza brachyantha HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1313.9 739 84.6
Bradi1g48447 Brachypodium distachyon HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1303.1 750 84.5
LP004200 Lolium perenne HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1300.4 750 84.7
Zm00007a00012560 Zea mays B104 HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1300.4 699 91.0
OsR498G0611674900.01 Oryza sativa ssp. indica HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1296.2 739 83.9
HORVU7Hr1G026040 Hordeum vulgare HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1271.9 748 82.6
TraesCS7A02G124000 Triticum aestivum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1271.5 748 82.2
TRITD7Av1G036750 Triticum turgidum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1271.5 748 82.2
TraesCS7D02G121900 Triticum aestivum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1266.9 748 82.0
TraesCS7B02G022900 Triticum aestivum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1265.0 748 81.8
TRITD7Bv1G008650 Triticum turgidum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1265.0 748 81.8
Zm00008a033638 Zea mays PH207 HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1192.9 692 86.4
Oropetium_20150105_24055 Oropetium thomaeum HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1145.6 724 78.6
LOC_Os06g06810 Oryza sativa ssp. japonica HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1132.1 645 83.1
Aco000336 Ananas comosus HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1127.9 753 70.9
evm.TU.AsparagusV1_01.1548.V1.1 Asparagus officinalis HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1099.3 755 69.3
Ma06_g07410 Musa acuminata HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1098.2 752 70.6
PEQU_13849 Phalaenopsis equestris HOM04x5M005913 ORTHO04x5M008336 0.0e+00 1078.5 749 68.2
Potri.018G081400 Populus trichocarpa HOM04x5M005913 ORTHO04x5M008336 1.5e-308 1061.2 751 67.6
p5.00_sc00001_p0398 Elaeis guineensis HOM04x5M005913 ORTHO04x5M008336 1.7e-304 1047.7 653 76.1
GSVIVG01015382001 Vitis vinifera HOM04x5M005913 ORTHO04x5M008336 1.1e-303 1045.0 745 67.5
AT5G19660 Arabidopsis thaliana HOM04x5M005913 ORTHO04x5M008336 1.8e-303 1044.3 743 67.3
Spipo26G0004900 Spirodela polyrhiza HOM04x5M005913 ORTHO04x5M008336 1.2e-302 1041.6 760 66.3
ATR0315G070 Amborella trichopoda HOM04x5M005913 ORTHO04x5M008336 2.7e-302 1040.4 781 65.6
CALSI_Maker00037724 Calamus simplicifolius HOM04x5M005913 ORTHO04x5M008336 1.2e-299 1031.6 641 76.0
Solyc09g007300.1 Solanum lycopersicum HOM04x5M005913 ORTHO04x5M008336 1.4e-298 1028.1 750 66.1
Sspon.08G0014050-2B Saccharum spontaneum HOM04x5M005913 ORTHO04x5M008336 4.8e-296 1019.6 494 98.2
Zosma11g00780 Zostera marina HOM04x5M005913 ORTHO04x5M008336 5.9e-294 1012.7 738 66.0
ASH_gene242 Apostasia shenzhenica HOM04x5M005913 ORTHO04x5M008336 3.4e-273 943.7 700 64.4
Mapoly0155s0018 Marchantia polymorpha HOM04x5M005913 ORTHO04x5M008336 1.4e-271 938.3 714 63.7
PH01001174G0220 Phyllostachys edulis HOM04x5M005913 ORTHO04x5M008336 2.9e-264 914.1 494 86.8
gene19928 Selaginella moellendorffii HOM04x5M005913 ORTHO04x5M008336 2.7e-262 907.5 679 63.0
gene7073 Selaginella moellendorffii HOM04x5M005913 ORTHO04x5M008336 1.3e-261 905.2 674 63.4
PAB00005731 Picea abies HOM04x5M005913 ORTHO04x5M008336 8.9e-258 892.5 632 67.4
Pp3c3_30280 Physcomitrium patens HOM04x5M005913 ORTHO04x5M008336 1.7e-240 835.1 581 67.8
MCO08G100 Micromonas commoda HOM04x5M005913 ORTHO04x5M008336 2.2e-200 701.8 705 51.2
Cre14.g628800 Chlamydomonas reinhardtii HOM04x5M005913 ORTHO04x5M008336 8.2e-187 656.8 618 52.4
Zjn_sc00049.1.g01300.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005913 ORTHO04x5M008336 5.7e-71 271.9 151 92.1
Sobic.004G289200 Sorghum bicolor HOM04x5M000024 ORTHO04x5M000009 4.0e-08 63.2 201 30.3
Sspon.04G0023790-1B Saccharum spontaneum HOM04x5M000024 ORTHO04x5M000009 2.6e-07 60.5 155 31.6
Sspon.04G0006760-2D Saccharum spontaneum HOM04x5M000024 ORTHO04x5M000009 3.4e-07 60.1 155 31.6
Pp3s169_40 Physcomitrium patens HOM04x5M005913 ORTHO04x5M000009 2.2e-06 57.4 140 33.6
Sspon.04G0023790-2C Saccharum spontaneum HOM04x5M000024 ORTHO04x5M000009 4.9e-06 56.2 155 31.0
CALSI_Maker00013410 Calamus simplicifolius HOM04x5M000024 ORTHO04x5M000009 8.4e-06 55.5 89 38.2
CALSI_Maker00005053 Calamus simplicifolius HOM04x5M000024 ORTHO04x5M000009 8.4e-06 55.5 89 38.2
Seita.1G264200 Setaria italica HOM04x5M000024 ORTHO04x5M000009 8.4e-06 55.5 141 29.1

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (3 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings