Interactive Phylogenetics Module

Gene Id
Sspon.07G0038610-1D

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.07G0038610-1D Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 2.2e-228 793.9 393 100.0
Sobic.008G017200 Sorghum bicolor HOM04x5M004507 ORTHO04x5M005410 1.8e-206 721.1 427 86.7
Misin15G007600 Miscanthus sinensis HOM04x5M004507 ORTHO04x5M005410 3.5e-205 716.8 427 86.4
Zm00008a036332 Zea mays PH207 HOM04x5M004507 ORTHO04x5M005410 1.4e-201 704.9 399 89.2
Oropetium_20150105_11037 Oropetium thomaeum HOM04x5M004507 ORTHO04x5M005410 6.4e-183 642.9 419 79.0
Seita.7G310400 Setaria italica HOM04x5M004507 ORTHO04x5M005410 2.4e-182 641.0 424 77.6
Seita.8G003800 Setaria italica HOM04x5M004507 ORTHO04x5M005410 6.0e-181 636.3 425 78.1
MisinT482300 Miscanthus sinensis HOM04x5M004507 ORTHO04x5M005410 8.6e-180 632.5 388 83.8
OsR498G1119370400.01 Oryza sativa ssp. indica HOM04x5M004507 ORTHO04x5M005410 1.4e-177 625.2 427 74.2
OsR498G1220875600.01 Oryza sativa ssp. indica HOM04x5M004507 ORTHO04x5M005410 2.0e-176 621.3 427 73.8
LOC_Os11g03794 Oryza sativa ssp. japonica HOM04x5M004507 ORTHO04x5M005410 4.4e-176 620.2 427 73.8
LOC_Os12g03540 Oryza sativa ssp. japonica HOM04x5M004507 ORTHO04x5M005410 7.6e-176 619.4 427 73.5
LP033593 Lolium perenne HOM04x5M004507 ORTHO04x5M005410 6.4e-175 616.3 406 75.9
OB11G11590 Oryza brachyantha HOM04x5M004507 ORTHO04x5M005410 2.4e-174 614.4 427 73.5
HORVU5Hr1G045070 Hordeum vulgare HOM04x5M004507 ORTHO04x5M005410 5.4e-174 613.2 427 73.3
TraesCS5D02G152200 Triticum aestivum HOM04x5M004507 ORTHO04x5M005410 6.0e-173 609.8 427 72.8
TraesCS5A02G138500 Triticum aestivum HOM04x5M004507 ORTHO04x5M005410 1.2e-168 595.5 427 71.9
TraesCS5B02G138600 Triticum aestivum HOM04x5M004507 ORTHO04x5M005410 1.9e-166 588.2 398 74.9
TRITD5Bv1G088770 Triticum turgidum HOM04x5M004507 ORTHO04x5M005410 1.9e-166 588.2 398 74.9
TRITD5Av1G105920 Triticum turgidum HOM04x5M004507 ORTHO04x5M005410 1.2e-165 585.5 398 74.4
Sspon.07G0038600-1D Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 5.3e-145 516.9 411 70.8
Pgl_GLEAN_10033199 Cenchrus americanus HOM04x5M004507 ORTHO04x5M005410 1.5e-144 515.4 395 69.4
Sspon.07G0019960-1A Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 3.4e-144 514.2 354 78.0
p5.00_sc00094_p0061 Elaeis guineensis HOM04x5M004507 ORTHO04x5M005410 2.5e-139 498.0 401 62.1
Potri.016G030400 Populus trichocarpa HOM04x5M004507 ORTHO04x5M005410 1.3e-130 469.2 431 55.7
Ma08_g26840 Musa acuminata HOM04x5M004507 ORTHO04x5M005410 1.2e-128 462.6 427 56.7
Bradi4g43700 Brachypodium distachyon HOM04x5M004507 ORTHO04x5M005410 7.7e-128 459.9 399 62.7
CALSI_Maker00048110 Calamus simplicifolius HOM04x5M004507 ORTHO04x5M005410 4.7e-125 450.7 371 61.7
ASH_gene5141 Apostasia shenzhenica HOM04x5M004507 ORTHO04x5M005410 2.3e-124 448.4 430 54.0
Sspon.07G0019960-2C Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 9.4e-118 426.4 391 64.2
Aco023948 Ananas comosus HOM04x5M004507 ORTHO04x5M005410 7.7e-112 406.8 376 57.4
Zosma6g00180 Zostera marina HOM04x5M004507 ORTHO04x5M005410 1.0e-111 406.4 429 49.7
OB12G11930 Oryza brachyantha HOM04x5M004507 ORTHO04x5M006219 2.1e-109 398.7 406 57.4
AT3G56900 Arabidopsis thaliana HOM04x5M004507 ORTHO04x5M005410 1.8e-108 395.6 445 48.3
Zm00007a00022532 Zea mays B104 HOM04x5M004507 ORTHO04x5M005410 8.3e-98 360.1 185 93.0
Sspon.07G0019960-1P Saccharum spontaneum HOM04x5M004507 ORTHO04x5M005410 3.1e-97 358.2 246 79.3
Zm00001d023264 Zea mays B73 HOM04x5M004507 ORTHO04x5M005410 2.0e-96 355.5 242 78.1
Pgl_GLEAN_10009938 Cenchrus americanus HOM04x5M004507 ORTHO04x5M005410 4.9e-90 334.3 251 70.1
GSVIVG01025850001 Vitis vinifera HOM04x5M004507 ORTHO04x5M005410 6.0e-80 300.8 180 74.4
evm.TU.AsparagusV1_02.1443.V1.1 Asparagus officinalis HOM04x5M004507 ORTHO04x5M005410 1.4e-76 289.7 183 74.3
gene10650 Selaginella moellendorffii HOM04x5M004507 ORTHO04x5M005410 1.8e-76 289.3 465 38.5
gene36333 Selaginella moellendorffii HOM04x5M004507 ORTHO04x5M005410 1.8e-76 289.3 465 38.5
ATR0307G134 Amborella trichopoda HOM04x5M004507 ORTHO04x5M005410 2.9e-74 282.0 179 70.4
Mapoly0010s0124 Marchantia polymorpha HOM04x5M004507 ORTHO04x5M005410 1.1e-73 280.0 462 38.7
Spipo6G0054400 Spirodela polyrhiza HOM04x5M004507 ORTHO04x5M005410 2.1e-72 275.8 187 69.0
Pp3c11_18220 Physcomitrium patens HOM04x5M004507 ORTHO04x5M005410 2.9e-66 255.4 445 35.1
gene37195 Selaginella moellendorffii HOM04x5M004507 ORTHO04x5M005410 2.4e-60 235.7 179 57.5
PEQU_35849 Phalaenopsis equestris HOM04x5M004507 ORTHO04x5M005410 4.8e-53 211.5 284 43.7
Zm00001d023266 Zea mays B73 HOM04x5M004507 ORTHO04x5M005410 1.4e-52 209.9 111 92.8
evm.TU.AsparagusV1_02.1442.V1.1 Asparagus officinalis HOM04x5M004507 ORTHO04x5M005410 5.1e-47 191.4 244 46.7
Zjn_sc00167.1.g00370.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004507 ORTHO04x5M005410 3.5e-40 168.7 298 40.9
Solyc08g036600.1 Solanum lycopersicum HOM04x5M004507 ORTHO04x5M005410 7.9e-40 167.5 206 45.6
ATR0307G100 Amborella trichopoda HOM04x5M004507 ORTHO04x5M005410 1.0e-39 167.2 248 39.5
Zm00007a00022530 Zea mays B104 HOM04x5M004507 ORTHO04x5M005410 1.9e-38 162.9 106 81.1
Zjn_sc00067.1.g00340.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004507 ORTHO04x5M005410 2.5e-33 146.0 154 55.2
LP035520 Lolium perenne HOM04x5M004507 ORTHO04x5M005410 3.2e-33 145.6 89 78.7
GSVIVG01025851001 Vitis vinifera HOM04x5M004507 ORTHO04x5M005410 6.2e-29 131.3 178 47.2
PAB00036398 Picea abies HOM04x5M004507 ORTHO04x5M005410 2.6e-27 125.9 88 70.5
OsR498G1220885900.01 Oryza sativa ssp. indica HOM04x5M004507 ORTHO04x5M005410 2.5e-25 119.4 94 64.9
MCO12G281 Micromonas commoda HOM04x5M004507 ORTHO04x5M005410 7.4e-14 81.3 193 30.1
Pgl_GLEAN_10018462 Cenchrus americanus HOM04x5M004507 ORTHO04x5M005410 2.2e-13 79.7 92 50.0
LOC_Os12g03730 Oryza sativa ssp. japonica HOM04x5M000377 ORTHO04x5M000276 1.2e-11 73.9 166 33.1

Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (1 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (3 genes)
Setaria italica (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (2 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings