Interactive Phylogenetics Module

Gene Id
Sspon.07G0013220-3D

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.07G0013220-3D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 5.5e-135 483.4 335 100.0
Zm00001d024833 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 6.4e-107 390.2 332 83.4
Sspon.07G0013220-1T Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 5.6e-103 377.1 367 81.2
Zm00007a00006561 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 1.2e-102 375.9 341 80.4
Sspon.07G0013220-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.5e-100 369.0 319 89.0
Sspon.07G0013220-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 2.2e-99 365.2 367 79.8
Misin17G049700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 2.8e-94 348.2 366 77.0
Misin16G054100 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 5.8e-92 340.5 367 78.2
Sobic.009G042800 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 8.3e-91 336.7 370 77.0
Seita.3G038900 Setaria italica HOM04x5M001523 ORTHO04x5M001589 1.2e-84 316.2 372 72.6
Oropetium_20150105_15532 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 7.1e-82 307.0 335 73.4
Zm00008a037492 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 3.5e-81 304.7 212 79.2
LOC_Os05g05580 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 5.1e-64 247.7 237 61.6
Bradi2g36005 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 7.9e-57 223.8 376 58.5
LP007813 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 5.5e-50 201.1 262 51.5
TraesCS1D02G093800 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 7.1e-50 200.7 363 58.1
TRITD1Av1G041990 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.2e-49 199.9 360 58.3
TraesCS1B02G112600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 7.9e-49 197.2 363 57.9
TRITD1Bv1G044830 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 7.9e-49 197.2 363 57.9
Pgl_GLEAN_10003497 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 5.0e-35 151.4 189 54.5
OB05G13160 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 3.2e-34 148.7 195 51.3
TraesCS1A02G102200 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 7.2e-26 120.9 189 46.0
PH01000258G0390 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 8.0e-25 117.5 162 49.4
evm.TU.AsparagusV1_02.2052.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 3.2e-18 95.5 246 35.0
p5.00_sc00211_p0002 Elaeis guineensis HOM04x5M001523 ORTHO04x5M016727 3.8e-11 72.0 129 45.0
ASH_gene8571 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M016727 5.5e-10 68.2 119 47.1
Pp3c19_10380 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 2.0e-07 59.7 255 27.8
Pgl_GLEAN_10004734 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 4.4e-07 58.5 114 30.7
CALSI_Maker00048187 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M016727 1.7e-06 56.6 113 36.3

Amborella trichopoda (0 genes)
Ananas comosus (0 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (0 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (0 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (1 genes)
Picea abies (0 genes)
Populus trichocarpa (0 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (1 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (0 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings