Interactive Phylogenetics Module

Gene Id
Sspon.07G0013200-1A

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.07G0013200-1A Saccharum spontaneum HOM04x5M005853 ORTHO04x5M007446 1.8e-141 504.6 262 100.0
Misin16G054300 Miscanthus sinensis HOM04x5M005853 ORTHO04x5M007446 8.1e-33 143.7 105 76.2
Misin17G049600 Miscanthus sinensis HOM04x5M005853 ORTHO04x5M007446 8.7e-27 123.6 75 84.0
Sobic.009G042900 Sorghum bicolor HOM04x5M005853 ORTHO04x5M007446 8.7e-27 123.6 75 84.0
Sspon.07G0013200-2B Saccharum spontaneum HOM04x5M005853 ORTHO04x5M007446 8.7e-27 123.6 75 84.0
Sspon.07G0013200-1P Saccharum spontaneum HOM04x5M005853 ORTHO04x5M007446 8.7e-27 123.6 75 84.0
Sspon.07G0013200-3D Saccharum spontaneum HOM04x5M005853 ORTHO04x5M007446 8.7e-27 123.6 75 84.0
Zm00001d010872 Zea mays B73 HOM04x5M005853 ORTHO04x5M007446 1.9e-26 122.5 75 82.7
Zm00007a00031051 Zea mays B104 HOM04x5M005853 ORTHO04x5M007446 1.9e-26 122.5 75 82.7
Zm00008a031738 Zea mays PH207 HOM04x5M005853 ORTHO04x5M007446 1.9e-26 122.5 75 82.7
Seita.3G039100 Setaria italica HOM04x5M005853 ORTHO04x5M007446 5.6e-26 120.9 75 81.3
Bradi2g36020 Brachypodium distachyon HOM04x5M005853 ORTHO04x5M007446 4.0e-24 114.8 75 73.3
HORVU1Hr1G020340 Hordeum vulgare HOM04x5M005853 ORTHO04x5M007446 4.0e-24 114.8 88 65.9
PH01001556G0450 Phyllostachys edulis HOM04x5M005853 ORTHO04x5M007446 1.5e-23 112.8 75 80.0
OB05G13140 Oryza brachyantha HOM04x5M005853 ORTHO04x5M007446 2.0e-23 112.5 58 91.4
LOC_Os05g05560 Oryza sativa ssp. japonica HOM04x5M005853 ORTHO04x5M007446 3.4e-23 111.7 74 74.3
OsR498G0509735900.01 Oryza sativa ssp. indica HOM04x5M005853 ORTHO04x5M007446 3.4e-23 111.7 74 74.3
Zjn_sc00016.1.g04380.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002070 ORTHO04x5M002109 9.9e-23 110.2 55 92.7
Oropetium_20150105_15530 Oropetium thomaeum HOM04x5M005853 ORTHO04x5M007446 2.2e-22 109.0 54 92.6
LP030655 Lolium perenne HOM04x5M005853 ORTHO04x5M007446 6.4e-22 107.5 75 68.0
Pgl_GLEAN_10003496 Cenchrus americanus HOM04x5M005853 ORTHO04x5M007446 8.4e-22 107.1 52 96.2
TraesCS1D02G093600 Triticum aestivum HOM04x5M005853 ORTHO04x5M007446 1.9e-21 105.9 75 70.7
TraesCS1A02G101900 Triticum aestivum HOM04x5M005853 ORTHO04x5M007446 1.9e-21 105.9 75 70.7
TraesCS1B02G112300 Triticum aestivum HOM04x5M005853 ORTHO04x5M007446 1.9e-21 105.9 75 70.7
TRITD1Av1G041930 Triticum turgidum HOM04x5M005853 ORTHO04x5M007446 1.9e-21 105.9 75 70.7
TRITD1Bv1G044810 Triticum turgidum HOM04x5M005853 ORTHO04x5M007446 1.9e-21 105.9 75 70.7
Zjn_sc00166.1.g00210.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005853 ORTHO04x5M007446 2.4e-21 105.5 52 90.4
ASH_gene11187 Apostasia shenzhenica HOM04x5M005853 ORTHO04x5M007446 1.3e-19 99.8 57 77.2
CALSI_Maker00012500 Calamus simplicifolius HOM04x5M005853 ORTHO04x5M007446 6.7e-19 97.4 57 75.4
CALSI_Maker00012366 Calamus simplicifolius HOM04x5M005853 ORTHO04x5M007446 6.7e-19 97.4 57 75.4
CALSI_Maker00028559 Calamus simplicifolius HOM04x5M005853 ORTHO04x5M007446 6.7e-19 97.4 57 75.4
CALSI_Maker00041108 Calamus simplicifolius HOM04x5M005853 ORTHO04x5M007446 6.7e-19 97.4 57 75.4
CALSI_Maker00046191 Calamus simplicifolius HOM04x5M005853 ORTHO04x5M007446 6.7e-19 97.4 57 75.4
Ma06_g21510 Musa acuminata HOM04x5M005853 ORTHO04x5M007446 8.7e-19 97.1 57 75.4
Spipo13G0052600 Spirodela polyrhiza HOM04x5M005853 ORTHO04x5M007446 1.5e-18 96.3 57 75.4
p5.00_sc00010_p0162 Elaeis guineensis HOM04x5M005853 ORTHO04x5M007446 1.9e-18 95.9 57 73.7
Aco007294 Ananas comosus HOM04x5M005853 ORTHO04x5M007446 2.5e-18 95.5 57 75.4
PEQU_11036 Phalaenopsis equestris HOM04x5M005853 ORTHO04x5M007446 2.5e-18 95.5 57 71.9
PEQU_38953 Phalaenopsis equestris HOM04x5M005853 ORTHO04x5M007446 5.6e-18 94.4 57 70.2
GSVIVG01012160001 Vitis vinifera HOM04x5M005853 ORTHO04x5M007446 9.6e-18 93.6 57 70.2
Solyc07g055030.1 Solanum lycopersicum HOM04x5M005853 ORTHO04x5M007446 2.8e-17 92.0 57 68.4
ATR0752G166 Amborella trichopoda HOM04x5M005853 ORTHO04x5M007446 8.1e-17 90.5 57 68.4
evm.TU.AsparagusV1_06.149.V1.1 Asparagus officinalis HOM04x5M005853 ORTHO04x5M007446 1.1e-16 90.1 57 70.2
AT5G44710 Arabidopsis thaliana HOM04x5M005853 ORTHO04x5M007446 1.1e-16 90.1 57 68.4
Solyc07g056070.1 Solanum lycopersicum HOM04x5M005853 ORTHO04x5M007446 1.4e-16 89.7 57 66.7
p5.00_sc00042_p0156 Elaeis guineensis HOM04x5M005853 ORTHO04x5M007446 1.2e-15 86.7 56 67.9
PAB00026852 Picea abies HOM04x5M005853 ORTHO04x5M007446 2.0e-15 85.9 58 65.5
Zosma181g00280 Zostera marina HOM04x5M005853 ORTHO04x5M007446 7.6e-15 84.0 57 61.4
Potri.003G155000 Populus trichocarpa HOM04x5M005853 ORTHO04x5M007446 2.5e-13 79.0 59 59.3
Sspon.08G0007290-2B Saccharum spontaneum HOM04x5M002513 ORTHO04x5M002773 1.6e-09 66.2 85 44.7
Sspon.07G0013230-1T Saccharum spontaneum HOM04x5M005853 ORTHO04x5M216849 1.2e-07 60.1 30 90.0
Pp3c15_4210 Physcomitrium patens HOM04x5M005853 ORTHO04x5M007446 6.5e-06 54.3 46 47.8

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (5 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (1 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings