Interactive Phylogenetics Module

Gene Id
Sspon.06G0001740-2D

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
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Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.06G0001740-2D Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 1.1e-172 609.4 561 100.0
Sspon.06G0001740-1A Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 8.6e-141 503.4 611 86.3
Misin13G182000 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 3.4e-137 491.5 598 84.6
Sobic.007G209500 Sorghum bicolor HOM04x5M002570 ORTHO04x5M002687 1.9e-132 475.7 599 84.1
Misin07G233600 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 8.4e-120 433.7 593 79.1
Zm00001d031454 Zea mays B73 HOM04x5M002570 ORTHO04x5M002687 2.1e-118 429.1 603 74.3
Zm00007a00022852 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 2.1e-118 429.1 603 74.3
Zm00008a003238 Zea mays PH207 HOM04x5M002570 ORTHO04x5M002687 1.9e-95 352.8 600 67.8
Seita.6G206100 Setaria italica HOM04x5M002570 ORTHO04x5M002687 9.4e-95 350.5 590 57.5
TraesCS7A02G247200 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 3.5e-81 305.4 473 56.9
TraesCS7D02G245800 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 1.9e-79 299.7 473 56.7
HORVU7Hr1G050770 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 2.1e-78 296.2 610 58.0
TraesCS7B02G144300 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 4.5e-73 278.5 392 60.2
LP013034 Lolium perenne HOM04x5M002570 ORTHO04x5M002687 6.3e-67 258.1 587 62.2
LOC_Os08g39980 Oryza sativa ssp. japonica HOM04x5M002570 ORTHO04x5M002687 1.4e-61 240.4 474 60.8
Zjn_sc00015.1.g05520.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 1.7e-56 223.4 718 41.1
Bradi4g33820 Brachypodium distachyon HOM04x5M002570 ORTHO04x5M002687 3.8e-56 222.2 401 46.4
Bradi3g40060 Brachypodium distachyon HOM04x5M002570 ORTHO04x5M002687 3.0e-53 212.6 458 50.4
Zjn_sc00008.1.g09320.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 5.2e-53 211.8 465 48.4
Pgl_GLEAN_10002113 Cenchrus americanus HOM04x5M002570 ORTHO04x5M002687 7.5e-52 208.0 588 41.2
OsR498G0816445800.01 Oryza sativa ssp. indica HOM04x5M002570 ORTHO04x5M002687 3.7e-51 205.7 347 70.0
TraesCS5D02G274400 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 1.8e-50 203.4 460 37.6
Seita.2G254700 Setaria italica HOM04x5M002570 ORTHO04x5M002687 4.1e-50 202.2 461 50.5
TraesCS5B02G266200 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 9.2e-50 201.1 461 37.5
TRITD5Bv1G149570 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 9.2e-50 201.1 461 37.5
HORVU5Hr1G073540 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 1.2e-49 200.7 382 39.3
HORVU5Hr1G073580 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 1.2e-49 200.7 382 39.3
Zm00001d020947 Zea mays B73 HOM04x5M002570 ORTHO04x5M002687 3.5e-49 199.1 458 41.3
Zm00007a00035265 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 3.5e-49 199.1 458 41.3
Zm00008a028437 Zea mays PH207 HOM04x5M002570 ORTHO04x5M002687 3.5e-49 199.1 458 41.3
TraesCS5A02G266600 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 1.3e-48 197.2 462 36.8
Sobic.002G248600 Sorghum bicolor HOM04x5M002570 ORTHO04x5M002687 9.5e-47 191.0 469 50.7
MisinT266000 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 2.2e-43 179.9 399 51.1
Ma09_g18710 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 6.4e-43 178.3 385 47.8
Ma08_g26310 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 3.2e-42 176.0 382 41.4
PH01000594G0730 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 9.2e-42 174.5 491 63.7
Ma09_g12020 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 3.5e-41 172.6 374 51.3
Misin04G229900 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 1.7e-40 170.2 460 48.3
ASH_gene16039 Apostasia shenzhenica HOM04x5M002570 ORTHO04x5M002687 3.9e-40 169.1 420 41.2
Ma09_g28270 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 3.9e-40 169.1 380 43.2
p5.00_sc00037_p0129 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 1.9e-39 166.8 474 47.0
TRITD5Av1G160060 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 2.5e-39 166.4 464 34.7
Sspon.02G0037080-2C Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 5.6e-39 165.2 207 51.7
CALSI_Maker00032927 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 9.5e-39 164.5 395 58.5
Sspon.02G0037080-3D Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 9.5e-39 164.5 464 45.9
CALSI_Maker00014448 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 4.4e-36 155.6 419 44.9
Sspon.02G0037080-1B Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 4.4e-36 155.6 210 49.5
p5.00_sc00020_p0160 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 5.8e-36 155.2 416 34.1
OsR498G0917730800.01 Oryza sativa ssp. indica HOM04x5M002570 ORTHO04x5M002687 5.8e-36 155.2 220 46.8
p5.00_sc00096_p0028 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 7.5e-36 154.8 416 38.9
LOC_Os09g31454 Oryza sativa ssp. japonica HOM04x5M002570 ORTHO04x5M002687 9.8e-36 154.5 220 46.8
p5.00_sc00131_p0015 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 1.7e-35 153.7 385 46.2
OB09G21390 Oryza brachyantha HOM04x5M002570 ORTHO04x5M002687 7.8e-33 144.8 159 53.5
PH01000770G0030 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 5.6e-31 138.7 328 34.8
Oropetium_20150105_05500 Oropetium thomaeum HOM04x5M002570 ORTHO04x5M002687 7.3e-31 138.3 145 54.5
OB08G26960 Oryza brachyantha HOM04x5M002570 ORTHO04x5M002687 2.3e-29 133.3 401 38.4
Spipo0G0079200 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 1.2e-28 131.0 183 47.5
Aco000751 Ananas comosus HOM04x5M002570 ORTHO04x5M002687 5.8e-28 128.6 192 47.4
Solyc01g073950.2 Solanum lycopersicum HOM04x5M002570 ORTHO04x5M002687 2.9e-27 126.3 452 30.1
TRITD7Av1G092980 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 3.7e-27 125.9 344 50.0
GSVIVG01001371001 Vitis vinifera HOM04x5M002570 ORTHO04x5M002687 3.7e-27 125.9 437 32.7
PH01000150G0150 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 6.4e-27 125.2 145 53.8
TRITD7Bv1G067710 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 1.1e-26 124.4 263 56.3
PH01001573G0060 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 7.1e-26 121.7 483 29.4
AT3G57980 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 1.2e-25 120.9 450 28.9
CALSI_Maker00038910 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 3.5e-25 119.4 404 40.3
Spipo12G0037900 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 3.5e-25 119.4 217 40.6
PEQU_14986 Phalaenopsis equestris HOM04x5M002570 ORTHO04x5M002687 3.9e-24 115.9 362 35.1
Pgl_GLEAN_10009993 Cenchrus americanus HOM04x5M002570 ORTHO04x5M002687 5.1e-24 115.5 155 48.4
LP030104 Lolium perenne HOM04x5M002570 ORTHO04x5M002687 4.3e-23 112.5 473 37.6
Zm00007a00029927 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 6.2e-22 108.6 120 50.8
AT2G42150 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 8.9e-21 104.8 362 30.4
ATR0605G388 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 1.3e-19 100.9 128 47.7
AT3G60110 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 3.8e-19 99.4 379 27.4
Zosma54g00430 Zostera marina HOM04x5M002570 ORTHO04x5M002687 3.8e-19 99.4 124 50.8
Potri.003G212500 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 6.4e-19 98.6 121 48.8
Potri.001G229300 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 5.4e-18 95.5 451 28.4
ATR0693G270 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 2.1e-17 93.6 362 27.6
p5.00_sc00154_p0058 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 4.6e-17 92.4 372 26.3
PAB00018157 Picea abies HOM04x5M002570 ORTHO04x5M002687 6.0e-17 92.0 124 44.4
Pp3c17_1160 Physcomitrium patens HOM04x5M002570 ORTHO04x5M002687 6.0e-17 92.0 134 41.8
Pp3c17_1175 Physcomitrium patens HOM04x5M002570 ORTHO04x5M002687 6.0e-17 92.0 134 41.8
Potri.001G013600 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 6.6e-16 88.6 117 48.7
AT2G44430 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 8.7e-16 88.2 443 35.0
Mapoly0032s0025 Marchantia polymorpha HOM04x5M002570 ORTHO04x5M002687 1.9e-15 87.0 135 38.5
CALSI_Maker00044657 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 2.5e-15 86.7 62 66.1
Solyc10g009160.2 Solanum lycopersicum HOM04x5M006888 ORTHO04x5M008419 1.1e-13 81.3 386 26.7
LP000741 Lolium perenne HOM04x5M006888 ORTHO04x5M008419 3.1e-13 79.7 128 39.1
Zosma16g01780 Zostera marina HOM04x5M002570 ORTHO04x5M002687 3.1e-13 79.7 128 39.8
Bradi1g24580 Brachypodium distachyon HOM04x5M006888 ORTHO04x5M008419 3.4e-12 76.3 122 34.4
PAB00022580 Picea abies HOM04x5M002570 ORTHO04x5M002687 3.4e-12 76.3 119 38.7
PAB00062047 Picea abies HOM04x5M002570 ORTHO04x5M002687 3.4e-12 76.3 119 38.7
Potri.004G036900 Populus trichocarpa HOM04x5M006888 ORTHO04x5M008419 5.8e-12 75.5 375 24.3
gene2213 Selaginella moellendorffii HOM04x5M002570 ORTHO04x5M002687 2.2e-11 73.6 143 32.2
OB07G24680 Oryza brachyantha HOM04x5M006888 ORTHO04x5M008419 4.9e-11 72.4 126 34.1
PH01003906G0090 Phyllostachys edulis HOM04x5M006888 ORTHO04x5M008419 4.9e-11 72.4 136 34.6
CALSI_Maker00044427 Calamus simplicifolius HOM04x5M006888 ORTHO04x5M008419 8.4e-11 71.6 393 26.0
Aco009146 Ananas comosus HOM04x5M006888 ORTHO04x5M008419 1.4e-10 70.9 137 38.7
TraesCS2A02G202700 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 3.2e-10 69.7 116 36.2
TRITD2Av1G074100 Triticum turgidum HOM04x5M006888 ORTHO04x5M008419 3.2e-10 69.7 116 36.2
gene5260 Selaginella moellendorffii HOM04x5M002570 ORTHO04x5M002687 4.2e-10 69.3 145 31.0
TraesCS2B02G229800 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 4.2e-10 69.3 116 36.2
TraesCS2D02G213000 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 4.2e-10 69.3 116 36.2
TRITD2Bv1G083420 Triticum turgidum HOM04x5M006888 ORTHO04x5M008419 4.2e-10 69.3 116 36.2
Zm00007a00040219 Zea mays B104 HOM04x5M006888 ORTHO04x5M008419 4.2e-10 69.3 124 34.7
Solyc02g078810.2 Solanum lycopersicum HOM04x5M006888 ORTHO04x5M008419 2.1e-09 67.0 379 24.0
CALSI_Maker00019150 Calamus simplicifolius HOM04x5M006888 ORTHO04x5M008419 4.6e-09 65.9 118 37.3
Zm00001d006606 Zea mays B73 HOM04x5M006888 ORTHO04x5M000946 7.9e-09 65.1 121 33.9
Zm00007a00010553 Zea mays B104 HOM04x5M006888 ORTHO04x5M008419 7.9e-09 65.1 121 33.9
AT1G61215 Arabidopsis thaliana HOM04x5M006888 ORTHO04x5M008419 3.0e-08 63.2 382 24.1
Spipo14G0058400 Spirodela polyrhiza HOM04x5M006888 ORTHO04x5M008419 3.0e-08 63.2 383 25.8
evm.TU.AsparagusV1_03.2223.V1.1 Asparagus officinalis HOM04x5M006888 ORTHO04x5M008419 6.6e-08 62.0 71 47.9
Oropetium_20150105_20233 Oropetium thomaeum HOM04x5M002570 ORTHO04x5M002687 1.9e-07 60.5 40 85.0
p5.00_sc00259_p0022 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 3.3e-07 59.7 71 47.9
p5.00_sc00259_p0021 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 3.3e-07 59.7 71 47.9
Oropetium_20150105_14821 Oropetium thomaeum HOM04x5M002570 ORTHO04x5M002687 5.6e-07 58.9 80 50.0
Misin03G324100 Miscanthus sinensis HOM04x5M006888 ORTHO04x5M008419 7.3e-07 58.5 120 32.5
MisinT311500 Miscanthus sinensis HOM04x5M006888 ORTHO04x5M008419 7.3e-07 58.5 120 32.5
Sobic.002G341100 Sorghum bicolor HOM04x5M006888 ORTHO04x5M008419 7.3e-07 58.5 120 32.5
Seita.2G354700 Setaria italica HOM04x5M006888 ORTHO04x5M008419 7.3e-07 58.5 119 33.6
Zm00007a00029926 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 1.3e-06 57.8 37 83.8
Sspon.02G0005140-2B Saccharum spontaneum HOM04x5M006888 ORTHO04x5M008419 3.6e-06 56.2 120 31.7
Sspon.02G0005140-1A Saccharum spontaneum HOM04x5M006888 ORTHO04x5M008419 3.6e-06 56.2 120 31.7

Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (6 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (7 genes)
Hordeum vulgare (3 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (7 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (1 genes)
Zea mays B73 (3 genes)
Zea mays B104 (6 genes)
Zea mays PH207 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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