Interactive Phylogenetics Module

Gene Id
Sspon.03G0000770-3C

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.03G0000770-3C Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1173.7 646 100.0
Misin06G362600 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1167.9 646 99.5
Misin06G412700 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1164.1 646 97.1
Sobic.003G394200 Sorghum bicolor HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1163.3 646 99.1
Sspon.03G0000770-1A Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1139.0 646 97.5
Seita.5G420100 Setaria italica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1132.1 646 96.4
Sspon.03G0000770-4D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1117.1 646 96.0
Sspon.03G0045090-1D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1098.6 683 90.8
Oropetium_20150105_13133 Oropetium thomaeum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1095.9 644 89.1
OsR498G0102540800.01 Oryza sativa ssp. indica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1086.6 645 91.8
Zm00007a00032775 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1086.6 646 94.1
OB01G49770 Oryza brachyantha HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1083.6 646 87.9
TraesCS3B02G422700 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1078.2 649 89.7
Zm00008a013008 Zea mays PH207 HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1077.4 655 92.7
HORVU3Hr1G088490 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1077.0 649 88.9
TraesCS3D02G383500 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1076.2 649 90.0
Zm00001d042451 Zea mays B73 HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1075.1 665 91.4
TraesCS3A02G390900 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 2.1e-311 1070.5 649 89.1
TRITD3Av1G230670 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 2.1e-311 1070.5 649 89.1
LP034954 Lolium perenne HOM04x5M004483 ORTHO04x5M005884 2.6e-311 1070.1 647 86.1
Bradi2g58070 Brachypodium distachyon HOM04x5M004483 ORTHO04x5M005884 3.8e-310 1066.2 645 87.6
HORVU3Hr1G088450 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 1.0e-302 1041.6 649 86.9
Pgl_GLEAN_10010470 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 1.2e-300 1034.6 649 87.8
Aco018477 Ananas comosus HOM04x5M004483 ORTHO04x5M005884 2.3e-294 1013.8 650 86.3
p5.00_sc00079_p0034 Elaeis guineensis HOM04x5M004483 ORTHO04x5M005884 5.6e-293 1009.2 648 85.6
TRITD3Bv1G217030 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 6.4e-289 995.7 645 84.5
Ma09_g26670 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 1.9e-288 994.2 647 84.7
CALSI_Maker00040564 Calamus simplicifolius HOM04x5M004483 ORTHO04x5M005884 7.1e-288 992.3 648 84.4
evm.TU.AsparagusV1_07.3477.V1.1 Asparagus officinalis HOM04x5M004483 ORTHO04x5M005884 6.6e-286 985.7 648 83.2
ASH_gene16649 Apostasia shenzhenica HOM04x5M004483 ORTHO04x5M005884 1.2e-279 964.9 651 81.0
Ma06_g32990 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 2.3e-278 960.7 645 82.5
Sspon.03G0000770-2B Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 1.5e-274 948.0 534 99.6
Zosma30g00970 Zostera marina HOM04x5M004483 ORTHO04x5M005884 8.7e-270 932.2 647 80.1
ATR1098G037 Amborella trichopoda HOM04x5M004483 ORTHO04x5M005884 5.3e-267 922.9 649 74.6
Solyc04g049490.2 Solanum lycopersicum HOM04x5M004483 ORTHO04x5M005884 1.7e-265 917.9 647 73.9
GSVIVG01016094001 Vitis vinifera HOM04x5M004483 ORTHO04x5M005884 1.2e-263 911.8 647 78.4
Spipo16G0007900 Spirodela polyrhiza HOM04x5M004483 ORTHO04x5M005884 4.3e-261 903.3 648 73.1
Potri.016G023000 Populus trichocarpa HOM04x5M004483 ORTHO04x5M005884 5.6e-261 902.9 647 73.9
PH01000031G1260 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 1.4e-259 898.3 675 77.0
AT1G50500 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 1.3e-246 855.1 656 68.6
Mapoly0030s0152 Marchantia polymorpha HOM04x5M004483 ORTHO04x5M005884 4.4e-213 743.8 651 60.2
gene23001 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 2.0e-205 718.4 665 59.4
gene24646 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 2.0e-205 718.4 665 59.4
Pp3c8_8190 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 3.5e-194 681.0 650 55.5
Pp3c24_4920 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 6.6e-193 676.8 649 54.5
Zjn_sc00034.1.g03870.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 8.9e-190 666.4 629 65.5
LOC_Os01g67880 Oryza sativa ssp. japonica HOM04x5M004483 ORTHO04x5M005884 3.7e-188 661.0 404 92.6
PEQU_14398 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 2.8e-167 591.7 407 81.3
PH01000229G0300 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 9.1e-118 427.2 469 55.4
Zjn_sc00009.1.g03380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 2.3e-105 386.0 306 74.2
MCO12G450 Micromonas commoda HOM04x5M004483 ORTHO04x5M005884 3.4e-80 302.4 600 34.3
Cre06.g259600 Chlamydomonas reinhardtii HOM04x5M004483 ORTHO04x5M005884 1.2e-64 250.8 618 29.3
AT1G50970 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 8.4e-47 191.4 646 28.5
PEQU_14397 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M021890 9.9e-40 167.9 136 68.4
PEQU_01746 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 1.8e-33 147.1 81 87.7
PAB00059840 Picea abies HOM04x5M004483 ORTHO04x5M005884 2.6e-32 143.3 151 70.2
Zm00001d045865 Zea mays B73 HOM04x5M004483 ORTHO04x5M021890 9.9e-24 114.8 112 60.7
PAB00038035 Picea abies HOM04x5M004483 ORTHO04x5M021890 4.6e-21 105.9 155 45.8
PAB00008915 Picea abies HOM04x5M004483 ORTHO04x5M005884 3.8e-15 86.3 52 76.9
evm.TU.AsparagusV1_01.70.V1.1 Asparagus officinalis HOM04x5M001647 ORTHO04x5M039403 1.2e-08 64.7 37 81.1
evm.TU.AsparagusV1_04.1246.V1.1 Asparagus officinalis HOM04x5M005851 ORTHO04x5M007066 2.6e-08 63.5 37 78.4
Zm00008a034137 Zea mays PH207 HOM04x5M001636 ORTHO04x5M001936 8.5e-07 58.5 65 56.9

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings