Interactive Phylogenetics Module

Gene Id
Sspon.02G0020200-3C

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.02G0020200-3C Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1555.0 759 100.0
Sspon.02G0020200-1A Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1368.6 716 94.6
Sobic.002G112700 Sorghum bicolor HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1352.8 739 91.3
Misin04G109200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1352.4 739 91.2
Misin03G098200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1348.2 739 91.1
Zm00008a008470 Zea mays PH207 HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1329.3 739 89.9
Seita.2G110200 Setaria italica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1320.1 720 91.0
OB07G13280 Oryza brachyantha HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1263.1 723 86.2
Bradi1g29020 Brachypodium distachyon HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1256.5 742 83.7
HORVU3Hr1G013640 Hordeum vulgare HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1255.7 725 85.4
LOC_Os07g07260 Oryza sativa ssp. japonica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1255.0 723 85.8
OsR498G0713585300.01 Oryza sativa ssp. indica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1254.2 723 85.8
TraesCS3A02G076400 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1250.3 725 84.8
LP027001 Lolium perenne HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1248.4 723 84.4
Zm00001d005157 Zea mays B73 HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1248.0 739 85.8
TraesCS3B02G090300 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1247.3 725 84.7
TraesCS3D02G076500 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1240.7 725 84.3
Aco003438 Ananas comosus HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1198.7 733 79.8
p5.00_sc00006_p0154 Elaeis guineensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1185.6 724 80.5
CALSI_Maker00005878 Calamus simplicifolius HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1181.4 723 79.5
Ma02_g07730 Musa acuminata HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1154.4 692 80.1
evm.TU.AsparagusV1_07.3669.V1.1 Asparagus officinalis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1154.0 720 78.1
Spipo4G0085100 Spirodela polyrhiza HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1146.3 693 78.8
TRITD3Av1G021090 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1137.1 725 79.0
TRITD3Bv1G024720 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1132.5 725 78.8
Zosma8g00780 Zostera marina HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1119.8 694 77.7
PEQU_08732 Phalaenopsis equestris HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1110.1 721 74.5
GSVIVG01019608001 Vitis vinifera HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1089.7 721 73.8
Potri.003G143700 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1088.9 722 74.2
Potri.001G087400 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1088.2 720 73.9
Solyc08g082830.2 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 2.9e-309 1063.5 720 72.4
ATR1098G082 Amborella trichopoda HOM04x5M005046 ORTHO04x5M006164 1.4e-306 1054.7 694 73.2
AT1G55090 Arabidopsis thaliana HOM04x5M005046 ORTHO04x5M006164 3.1e-303 1043.5 719 69.8
ASH_gene8283 Apostasia shenzhenica HOM04x5M005046 ORTHO04x5M006164 1.2e-302 1041.6 659 76.3
gene17841 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 2.1e-267 924.5 721 62.1
gene29750 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 2.8e-267 924.1 715 62.8
Mapoly0035s0052 Marchantia polymorpha HOM04x5M005046 ORTHO04x5M006164 6.2e-267 922.9 734 62.5
MCO17G006 Micromonas commoda HOM04x5M005046 ORTHO04x5M006164 9.6e-244 845.9 695 60.1
gene12860 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 3.5e-238 827.4 697 59.0
Pp3c17_21910 Physcomitrium patens HOM04x5M005046 ORTHO04x5M006164 4.6e-238 827.0 670 60.9
gene4078 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 7.9e-238 826.2 697 59.0
Cre10.g435250 Chlamydomonas reinhardtii HOM04x5M005046 ORTHO04x5M006164 1.8e-221 771.9 783 52.1
Sspon.02G0020200-4D Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 2.7e-206 721.5 373 94.6
PH01002232G0290 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 1.9e-183 645.6 407 79.6
PH01002232G0310 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 2.3e-173 612.1 346 88.2
Oropetium_20150105_11453 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 6.2e-166 587.4 304 93.8
Oropetium_20150105_11454 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 1.1e-162 576.6 297 93.9
PAB00015820 Picea abies HOM04x5M005046 ORTHO04x5M006164 3.2e-154 548.5 412 67.2
Zm00007a00049707 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 1.5e-143 513.1 336 80.1
Zm00007a00051183 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 2.1e-129 466.1 264 87.9
PH01000031G0760 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 1.2e-116 423.7 277 79.8
Sspon.02G0020200-2B Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 1.0e-104 384.0 197 96.4
Zjn_sc00077.1.g00130.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005046 ORTHO04x5M006164 5.6e-58 228.8 237 54.0
PH01000031G0750 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 4.4e-47 192.6 107 86.0
Pgl_GLEAN_10033649 Cenchrus americanus HOM04x5M005046 ORTHO04x5M006164 2.2e-30 137.1 66 97.0
evm.TU.AsparagusV1_05.1844.V1.1 Asparagus officinalis HOM04x5M001700 ORTHO04x5M004467 5.8e-23 112.5 66 74.2
Zjn_sc00077.1.g00140.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005046 ORTHO04x5M006164 1.1e-21 108.2 61 83.6
PAB00013173 Picea abies HOM04x5M005046 ORTHO04x5M006164 1.5e-18 97.8 65 67.7
Solyc06g071240.1 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 3.3e-18 96.7 127 45.7

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (1 genes)
Picea abies (2 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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