Interactive Phylogenetics Module

Gene Id
Sspon.02G0020200-2B

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.02G0020200-2B Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 6.0e-229 795.8 400 100.0
Sspon.02G0020200-1A Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 1.2e-107 392.9 199 98.0
Sobic.002G112700 Sorghum bicolor HOM04x5M005046 ORTHO04x5M006164 1.5e-107 392.5 199 97.5
Zm00008a008470 Zea mays PH207 HOM04x5M005046 ORTHO04x5M006164 2.0e-107 392.1 199 97.0
Misin03G098200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 4.5e-107 391.0 199 97.5
Misin04G109200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 1.3e-106 389.4 199 96.5
Oropetium_20150105_11454 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 1.7e-106 389.0 199 96.5
TRITD3Av1G021090 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 1.4e-105 386.0 206 91.7
Seita.2G110200 Setaria italica HOM04x5M005046 ORTHO04x5M006164 1.9e-105 385.6 199 95.5
Sspon.02G0020200-3C Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 3.2e-105 384.8 197 96.4
OB07G13280 Oryza brachyantha HOM04x5M005046 ORTHO04x5M006164 1.2e-104 382.9 199 95.5
PH01002232G0310 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 2.1e-104 382.1 199 95.0
TRITD3Bv1G024720 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 2.7e-104 381.7 206 90.8
Bradi1g29020 Brachypodium distachyon HOM04x5M005046 ORTHO04x5M006164 3.9e-103 377.9 199 93.0
TraesCS3A02G076400 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 5.1e-103 377.5 199 93.0
LOC_Os07g07260 Oryza sativa ssp. japonica HOM04x5M005046 ORTHO04x5M006164 8.7e-103 376.7 199 94.0
OsR498G0713585300.01 Oryza sativa ssp. indica HOM04x5M005046 ORTHO04x5M006164 8.7e-103 376.7 199 94.0
HORVU3Hr1G013640 Hordeum vulgare HOM04x5M005046 ORTHO04x5M006164 1.1e-102 376.3 199 93.0
PH01000031G0760 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 1.9e-102 375.6 195 94.4
TraesCS3B02G090300 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 3.3e-102 374.8 199 92.5
p5.00_sc00006_p0154 Elaeis guineensis HOM04x5M005046 ORTHO04x5M006164 9.6e-102 373.2 199 91.0
LP027001 Lolium perenne HOM04x5M005046 ORTHO04x5M006164 9.6e-102 373.2 199 92.0
TraesCS3D02G076500 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 1.8e-100 369.0 249 78.7
CALSI_Maker00005878 Calamus simplicifolius HOM04x5M005046 ORTHO04x5M006164 9.0e-100 366.7 199 88.9
evm.TU.AsparagusV1_07.3669.V1.1 Asparagus officinalis HOM04x5M005046 ORTHO04x5M006164 7.6e-99 363.6 199 87.9
Aco003438 Ananas comosus HOM04x5M005046 ORTHO04x5M006164 1.4e-97 359.4 199 86.9
Potri.001G087400 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 5.5e-97 357.5 195 87.7
Ma02_g07730 Musa acuminata HOM04x5M005046 ORTHO04x5M006164 1.2e-96 356.3 294 68.7
Spipo4G0085100 Spirodela polyrhiza HOM04x5M005046 ORTHO04x5M006164 2.1e-96 355.5 199 85.4
Potri.003G143700 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 1.1e-94 349.7 195 86.2
ASH_gene8283 Apostasia shenzhenica HOM04x5M005046 ORTHO04x5M006164 7.4e-94 347.1 199 83.4
PEQU_08732 Phalaenopsis equestris HOM04x5M005046 ORTHO04x5M006164 9.6e-94 346.7 199 82.9
Solyc08g082830.2 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 9.6e-94 346.7 195 83.6
GSVIVG01019608001 Vitis vinifera HOM04x5M005046 ORTHO04x5M006164 2.1e-93 345.5 195 84.1
AT1G55090 Arabidopsis thaliana HOM04x5M005046 ORTHO04x5M006164 1.3e-90 336.3 195 81.0
Zosma8g00780 Zostera marina HOM04x5M005046 ORTHO04x5M006164 3.2e-89 331.6 199 80.9
ATR1098G082 Amborella trichopoda HOM04x5M005046 ORTHO04x5M006164 7.1e-89 330.5 195 80.0
Zm00001d005157 Zea mays B73 HOM04x5M005046 ORTHO04x5M006164 1.3e-87 326.2 164 98.2
Zm00007a00049707 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 1.8e-87 325.9 163 98.8
Pp3c17_21910 Physcomitrium patens HOM04x5M005046 ORTHO04x5M006164 3.0e-79 298.5 196 74.0
gene17841 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 3.0e-79 298.5 199 71.9
gene29750 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 8.8e-79 297.0 199 71.4
Mapoly0035s0052 Marchantia polymorpha HOM04x5M005046 ORTHO04x5M006164 1.1e-78 296.6 199 71.9
PAB00015820 Picea abies HOM04x5M005046 ORTHO04x5M006164 1.7e-74 282.7 178 75.8
MCO17G006 Micromonas commoda HOM04x5M005046 ORTHO04x5M006164 2.1e-72 275.8 199 66.8
gene12860 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 2.6e-70 268.9 195 66.2
gene4078 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 5.7e-70 267.7 195 65.6
Cre10.g435250 Chlamydomonas reinhardtii HOM04x5M005046 ORTHO04x5M006164 8.5e-66 253.8 202 61.4
Sspon.01G0023870-1A Saccharum spontaneum HOM04x5M019008 ORTHO04x5M218792 4.2e-49 198.4 186 64.5
Sspon.03G0041210-1C Saccharum spontaneum HOM04x5M000249 ORTHO04x5M000416 3.7e-37 158.7 169 56.8
Sspon.01G0060230-1D Saccharum spontaneum HOM04x5M019008 ORTHO04x5M005204 2.6e-22 109.4 74 75.7
Solyc06g071240.1 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 1.4e-12 77.0 67 58.2

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (0 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (1 genes)
Picea abies (1 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings