Interactive Phylogenetics Module

Gene Id
Sspon.01G0004720-4D

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.01G0004720-4D Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 7.7e-123 442.6 238 100.0
Sspon.01G0004720-1P Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 9.4e-121 435.6 235 100.0
Sspon.01G0004720-3C Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 2.6e-118 427.6 235 98.3
Misin01G450600 Miscanthus sinensis HOM04x5M003062 ORTHO04x5M003442 1.2e-112 408.7 223 98.7
Misin01G450900 Miscanthus sinensis HOM04x5M003062 ORTHO04x5M003442 2.1e-112 407.9 223 98.7
Sobic.001G478300 Sorghum bicolor HOM04x5M003062 ORTHO04x5M003442 3.6e-112 407.1 223 97.8
Seita.1G081800 Setaria italica HOM04x5M003062 ORTHO04x5M003442 1.7e-109 398.3 223 96.4
Zm00001d027962 Zea mays B73 HOM04x5M003062 ORTHO04x5M003442 2.2e-109 397.9 226 95.1
Zm00008a000563 Zea mays PH207 HOM04x5M003062 ORTHO04x5M003442 2.2e-109 397.9 226 95.1
Sspon.01G0009260-2B Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 3.7e-109 397.1 233 93.1
PH01000803G0280 Phyllostachys edulis HOM04x5M003062 ORTHO04x5M003442 3.6e-104 380.6 222 91.0
Zm00007a00015625 Zea mays B104 HOM04x5M003062 ORTHO04x5M003442 1.4e-103 378.6 232 88.4
Zm00008a035970 Zea mays PH207 HOM04x5M003062 ORTHO04x5M003442 1.4e-103 378.6 232 88.4
Misin01G358200 Miscanthus sinensis HOM04x5M003062 ORTHO04x5M003442 3.4e-102 374.0 222 92.3
OsR498G0305351100.01 Oryza sativa ssp. indica HOM04x5M003062 ORTHO04x5M003442 7.5e-102 372.9 226 88.5
Sspon.01G0004720-1A Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 9.8e-102 372.5 237 89.9
OB03G16420 Oryza brachyantha HOM04x5M003062 ORTHO04x5M003442 1.7e-101 371.7 225 89.8
LOC_Os03g08770 Oryza sativa ssp. japonica HOM04x5M003062 ORTHO04x5M003442 2.2e-101 371.3 223 89.2
Seita.9G513800 Setaria italica HOM04x5M003062 ORTHO04x5M003442 2.2e-101 371.3 225 90.2
OB0111G10030 Oryza brachyantha HOM04x5M003062 ORTHO04x5M003442 1.6e-99 365.2 225 88.4
Zjn_sc00003.1.g10180.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003062 ORTHO04x5M003442 2.2e-98 361.3 224 87.5
OsR498G0306417600.01 Oryza sativa ssp. indica HOM04x5M003062 ORTHO04x5M003442 7.2e-97 356.3 225 84.4
Zm00001d048239 Zea mays B73 HOM04x5M003062 ORTHO04x5M003442 3.6e-96 354.0 219 88.1
Pgl_GLEAN_10008730 Cenchrus americanus HOM04x5M003062 ORTHO04x5M003442 4.0e-95 350.5 227 86.8
Sspon.01G0009260-3D Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 3.4e-94 347.4 223 87.4
Oropetium_20150105_00315 Oropetium thomaeum HOM04x5M003062 ORTHO04x5M003442 7.5e-94 346.3 226 84.1
Sspon.01G0004720-2B Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 2.2e-93 344.7 226 84.5
Bradi1g72120 Brachypodium distachyon HOM04x5M003062 ORTHO04x5M003442 1.6e-88 328.6 225 79.6
TraesCS4A02G002400 Triticum aestivum HOM04x5M003062 ORTHO04x5M003442 7.5e-86 319.7 216 80.6
TraesCS4B02G302700 Triticum aestivum HOM04x5M003062 ORTHO04x5M003442 3.7e-85 317.4 214 79.9
TRITD4Bv1G175000 Triticum turgidum HOM04x5M003062 ORTHO04x5M003442 3.7e-85 317.4 214 79.9
TRITD4Av1G001030 Triticum turgidum HOM04x5M003062 ORTHO04x5M003442 8.3e-85 316.2 216 79.6
TraesCS4D02G301200 Triticum aestivum HOM04x5M003062 ORTHO04x5M003442 1.8e-84 315.1 215 79.5
HORVU4Hr1G056200 Hordeum vulgare HOM04x5M003062 ORTHO04x5M003442 2.4e-84 314.7 216 79.2
HORVU4Hr1G077970 Hordeum vulgare HOM04x5M003062 ORTHO04x5M003442 3.2e-84 314.3 216 79.2
CALSI_Maker00016696 Calamus simplicifolius HOM04x5M003062 ORTHO04x5M003442 5.4e-84 313.5 224 74.1
LP029391 Lolium perenne HOM04x5M003062 ORTHO04x5M003442 3.5e-83 310.8 217 79.3
CALSI_Maker00011001 Calamus simplicifolius HOM04x5M003062 ORTHO04x5M003442 4.7e-80 300.4 221 73.3
Ma01_g08730 Musa acuminata HOM04x5M003062 ORTHO04x5M003442 1.7e-77 292.0 223 71.3
PEQU_04760 Phalaenopsis equestris HOM04x5M003062 ORTHO04x5M003442 4.1e-76 287.3 220 70.0
p5.00_sc00033_p0156 Elaeis guineensis HOM04x5M003062 ORTHO04x5M003442 3.5e-75 284.3 222 68.9
Sspon.01G0004720-2P Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 2.3e-74 281.6 152 99.3
Aco004029 Ananas comosus HOM04x5M003062 ORTHO04x5M003442 1.1e-73 279.3 222 69.4
Ma04_g11640 Musa acuminata HOM04x5M003062 ORTHO04x5M003442 4.4e-70 267.3 220 64.5
evm.TU.AsparagusV1_08.698.V1.1 Asparagus officinalis HOM04x5M003062 ORTHO04x5M003442 2.9e-69 264.6 212 68.4
Aco002062 Ananas comosus HOM04x5M003062 ORTHO04x5M003442 7.8e-67 256.5 222 64.4
LOC_Os03g37580 Oryza sativa ssp. japonica HOM04x5M003062 ORTHO04x5M003442 1.1e-65 252.7 152 85.5
p5.00_sc00134_p0086 Elaeis guineensis HOM04x5M003062 ORTHO04x5M003442 1.6e-64 248.8 221 62.0
Potri.006G119200 Populus trichocarpa HOM04x5M003062 ORTHO04x5M003442 2.6e-62 241.5 228 61.0
GSVIVG01033713001 Vitis vinifera HOM04x5M003062 ORTHO04x5M003442 3.4e-62 241.1 224 62.5
Potri.016G097000 Populus trichocarpa HOM04x5M003062 ORTHO04x5M003442 5.4e-60 233.8 225 60.0
evm.TU.AsparagusV1_Unassigned.949.V1.1 Asparagus officinalis HOM04x5M003062 ORTHO04x5M003442 3.9e-58 227.6 209 62.7
AT2G36680 Arabidopsis thaliana HOM04x5M003062 ORTHO04x5M003442 6.2e-56 220.3 220 56.8
Solyc10g083780.1 Solanum lycopersicum HOM04x5M003062 ORTHO04x5M003442 1.1e-55 219.5 232 58.6
Zm00008a033609 Zea mays PH207 HOM04x5M003062 ORTHO04x5M003442 3.1e-55 218.0 164 75.6
AT3G53120 Arabidopsis thaliana HOM04x5M003062 ORTHO04x5M003442 5.2e-55 217.2 220 56.4
Zosma78g00270 Zostera marina HOM04x5M003062 ORTHO04x5M003442 2.0e-54 215.3 224 54.9
Zm00007a00023822 Zea mays B104 HOM04x5M003062 ORTHO04x5M003442 4.3e-49 197.6 110 95.5
ATR1158G038 Amborella trichopoda HOM04x5M003062 ORTHO04x5M003442 9.6e-49 196.4 209 55.0
Spipo1G0029400 Spirodela polyrhiza HOM04x5M003062 ORTHO04x5M003442 1.6e-48 195.7 173 59.5
Solyc10g085810.1 Solanum lycopersicum HOM04x5M003062 ORTHO04x5M003442 2.2e-45 185.3 221 52.0
Zm00007a00045891 Zea mays B104 HOM04x5M003062 ORTHO04x5M003442 1.7e-42 175.6 99 93.9
Mapoly0070s0080 Marchantia polymorpha HOM04x5M003062 ORTHO04x5M003442 1.4e-39 166.0 234 44.9
PAB00013217 Picea abies HOM04x5M003062 ORTHO04x5M003442 1.4e-39 166.0 203 45.3
Zjn_sc00002.1.g12320.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003062 ORTHO04x5M003442 9.3e-36 153.3 123 72.4
Pp3c2_570 Physcomitrium patens HOM04x5M003062 ORTHO04x5M003442 7.4e-33 143.7 256 39.1
gene26822 Selaginella moellendorffii HOM04x5M003062 ORTHO04x5M003442 9.6e-33 143.3 152 46.7
gene15444 Selaginella moellendorffii HOM04x5M003062 ORTHO04x5M003442 4.0e-31 137.9 150 46.7
gene9944 Selaginella moellendorffii HOM04x5M003062 ORTHO04x5M003442 1.0e-29 133.3 152 45.4
gene14254 Selaginella moellendorffii HOM04x5M003062 ORTHO04x5M003442 1.3e-29 132.9 171 42.1
Pp3c14_24180 Physcomitrium patens HOM04x5M003062 ORTHO04x5M003442 1.7e-29 132.5 151 44.4
Zm00001d038935 Zea mays B73 HOM04x5M003062 ORTHO04x5M003442 9.3e-28 126.7 67 97.0
ATR0661G393 Amborella trichopoda HOM04x5M003062 ORTHO04x5M003442 3.5e-27 124.8 224 38.8
Sspon.01G0009260-1A Saccharum spontaneum HOM04x5M003925 ORTHO04x5M005853 4.6e-27 124.4 73 91.8
Pp3c1_40630 Physcomitrium patens HOM04x5M003062 ORTHO04x5M003442 3.9e-26 121.3 204 38.2
Aco027878 Ananas comosus HOM04x5M003062 ORTHO04x5M003442 5.3e-23 110.9 78 69.2
Pgl_GLEAN_10026818 Cenchrus americanus HOM04x5M003062 ORTHO04x5M003442 2.0e-22 109.0 70 82.9
PAB00030632 Picea abies HOM04x5M003062 ORTHO04x5M003442 5.1e-18 94.4 92 50.0
Zjn_sc00002.1.g12310.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M003062 ORTHO04x5M003442 9.7e-17 90.1 48 91.7
Pp3c17_23280 Physcomitrium patens HOM04x5M003062 ORTHO04x5M003442 1.3e-16 89.7 111 41.4
Bradi1g21840 Brachypodium distachyon HOM04x5M003062 ORTHO04x5M003442 2.4e-15 85.5 97 55.7
PAB00010919 Picea abies HOM04x5M003062 ORTHO04x5M003442 3.1e-15 85.1 93 47.3
Sspon.08G0019540-1B Saccharum spontaneum HOM04x5M000372 ORTHO04x5M010053 3.6e-11 71.6 207 35.7
MCO15G178 Micromonas commoda HOM04x5M003062 ORTHO04x5M003442 1.0e-10 70.1 164 30.5
PAB00010920 Picea abies HOM04x5M003062 ORTHO04x5M003442 1.1e-09 66.6 84 42.9
OB03G32680 Oryza brachyantha HOM04x5M003062 ORTHO04x5M003442 4.3e-09 64.7 53 69.8
Cre08.g362550 Chlamydomonas reinhardtii HOM04x5M003062 ORTHO04x5M003442 4.5e-06 54.7 153 30.1

Amborella trichopoda (2 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (4 genes)
Picea abies (4 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (2 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (3 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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