Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Solyc08g036620.2	Solanum lycopersicum	HOM04x5M007496	ORTHO04x5M004604	8.4e-50	198.7	104	100.0
Solyc08g036640.2	Solanum lycopersicum	HOM04x5M007496	ORTHO04x5M004604	1.0e-34	148.7	111	73.0
Solyc08g036660.2	Solanum lycopersicum	HOM04x5M007496	ORTHO04x5M004604	9.7e-30	132.1	128	62.5
GSVIVG01007188001	Vitis vinifera	HOM04x5M007496	ORTHO04x5M004604	8.0e-16	85.9	90	56.7
GSVIVG01021514001	Vitis vinifera	HOM04x5M007496	ORTHO04x5M004604	4.4e-14	80.1	126	44.4
GSVIVG01021516001	Vitis vinifera	HOM04x5M007496	ORTHO04x5M004604	1.8e-12	74.7	126	42.9
AT1G30135	Arabidopsis thaliana	HOM04x5M007496	ORTHO04x5M004604	3.1e-12	73.9	128	43.8
Potri.006G023301	Populus trichocarpa	HOM04x5M007496	ORTHO04x5M004604	4.1e-12	73.6	121	44.6
GSVIVG01021518001	Vitis vinifera	HOM04x5M007496	ORTHO04x5M004604	4.5e-11	70.1	79	53.2
GSVIVG01021519001	Vitis vinifera	HOM04x5M007496	ORTHO04x5M004604	7.7e-11	69.3	119	42.9
AT2G34600	Arabidopsis thaliana	HOM04x5M007496	ORTHO04x5M004604	2.2e-10	67.8	126	43.7
Potri.011G083900	Populus trichocarpa	HOM04x5M007496	ORTHO04x5M004604	1.9e-09	64.7	81	51.9
Ma02_g14820	Musa acuminata	HOM04x5M007496	ORTHO04x5M004604	2.5e-09	64.3	86	43.0
PEQU_20930	Phalaenopsis equestris	HOM04x5M007496	ORTHO04x5M004604	3.2e-09	63.9	85	45.9
p5.00_sc00407_p0006	Elaeis guineensis	HOM04x5M007496	ORTHO04x5M004604	5.5e-09	63.2	106	38.7
ASH_gene1383	Apostasia shenzhenica	HOM04x5M007496	ORTHO04x5M004604	2.1e-08	61.2	90	45.6
Ma04_g38060	Musa acuminata	HOM04x5M007496	ORTHO04x5M004604	4.7e-08	60.1	91	40.7
p5.00_sc00407_p0005	Elaeis guineensis	HOM04x5M007496	ORTHO04x5M004604	6.1e-08	59.7	107	36.4
Ma07_g01220	Musa acuminata	HOM04x5M007496	ORTHO04x5M004604	1.0e-07	58.9	93	38.7
ATR1098G148	Amborella trichopoda	HOM04x5M034952	ORTHO04x5M004604	3.0e-07	57.4	122	40.2
ATR0559G372	Amborella trichopoda	HOM04x5M034952	ORTHO04x5M004604	2.6e-06	54.3	129	38.0
Ma06_g32910	Musa acuminata	HOM04x5M007496	ORTHO04x5M004604	4.4e-06	53.5	110	35.5

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment