Interactive Phylogenetics Module

Gene Id
Solyc04g049490.2

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g049490.2 Solanum lycopersicum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1561.6 825 100.0
GSVIVG01016094001 Vitis vinifera HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1295.4 826 83.3
p5.00_sc00079_p0034 Elaeis guineensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1272.3 837 80.5
Ma09_g26670 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1263.4 837 80.6
CALSI_Maker00040564 Calamus simplicifolius HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1256.1 837 79.7
Aco018477 Ananas comosus HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1248.4 840 78.8
Oropetium_20150105_13133 Oropetium thomaeum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1246.5 833 78.9
ASH_gene16649 Apostasia shenzhenica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1245.3 839 78.8
Potri.016G023000 Populus trichocarpa HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1243.8 822 80.4
evm.TU.AsparagusV1_07.3477.V1.1 Asparagus officinalis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1242.3 838 78.2
Misin06G412700 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1231.9 839 77.8
Zosma30g00970 Zostera marina HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1231.5 833 78.6
Ma06_g32990 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1229.9 833 78.6
ATR1098G037 Amborella trichopoda HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1229.2 831 78.7
Bradi2g58070 Brachypodium distachyon HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1226.1 834 77.3
OB01G49770 Oryza brachyantha HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1223.4 837 77.3
Misin06G362600 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1221.8 840 76.8
Seita.5G420100 Setaria italica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1216.1 841 77.1
AT1G50500 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1215.3 828 77.3
Sobic.003G394200 Sorghum bicolor HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1206.8 841 76.2
Spipo16G0007900 Spirodela polyrhiza HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1205.3 838 76.1
LP034954 Lolium perenne HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1204.5 837 75.7
TraesCS3B02G422700 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1201.4 843 75.2
Zm00008a013008 Zea mays PH207 HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1198.7 848 75.9
HORVU3Hr1G088490 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1198.3 842 74.9
TraesCS3D02G383500 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1197.2 843 75.0
Zm00001d042451 Zea mays B73 HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1196.4 858 75.2
TraesCS3A02G390900 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1196.0 843 75.0
TRITD3Av1G230670 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1196.0 843 75.0
OsR498G0102540800.01 Oryza sativa ssp. indica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1180.2 821 76.1
Sspon.03G0000770-1A Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1179.9 841 74.9
HORVU3Hr1G088450 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1173.3 842 74.2
Sspon.03G0000770-4D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1155.6 841 73.5
TRITD3Bv1G217030 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1155.6 833 74.2
Sspon.03G0045090-1D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1137.1 878 70.4
Pgl_GLEAN_10010470 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1117.1 861 71.1
PH01000031G1260 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 7.8e-308 1058.9 863 68.3
Mapoly0030s0152 Marchantia polymorpha HOM04x5M004483 ORTHO04x5M005884 3.1e-296 1020.4 847 64.3
Zm00007a00032775 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 3.5e-292 1006.9 714 74.6
Pp3c8_8190 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 3.7e-281 970.3 828 61.8
gene23001 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 3.1e-280 967.2 842 61.9
gene24646 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 3.1e-280 967.2 842 61.9
Pp3c24_4920 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 2.3e-275 951.0 828 61.2
Sspon.03G0000770-3C Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 5.9e-263 909.8 647 73.9
Sspon.03G0000770-2B Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 1.1e-237 825.9 841 57.4
Zjn_sc00034.1.g03870.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 9.9e-186 653.3 838 49.9
PH01000229G0300 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 1.1e-181 639.8 650 58.3
PEQU_14398 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 1.9e-160 569.3 413 73.4
LOC_Os01g67880 Oryza sativa ssp. japonica HOM04x5M004483 ORTHO04x5M005884 9.4e-160 567.0 400 74.0
MCO12G450 Micromonas commoda HOM04x5M004483 ORTHO04x5M005884 1.2e-138 496.9 783 40.1
PEQU_01746 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 3.4e-117 425.6 277 81.9
Cre06.g259600 Chlamydomonas reinhardtii HOM04x5M004483 ORTHO04x5M005884 2.3e-105 386.3 818 32.6
AT1G50970 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 5.4e-99 365.2 795 36.5
Zjn_sc00009.1.g03380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 6.6e-97 358.2 304 65.8
Misin11G134900 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 9.6e-80 301.2 181 87.8
Zm00007a00040839 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 1.4e-46 191.0 116 87.9
PAB00008915 Picea abies HOM04x5M004483 ORTHO04x5M005884 1.8e-46 190.7 120 77.5
PEQU_14397 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M021890 8.8e-41 171.8 135 69.6
PAB00059840 Picea abies HOM04x5M004483 ORTHO04x5M005884 6.7e-33 145.6 137 61.3
PAB00038035 Picea abies HOM04x5M004483 ORTHO04x5M021890 2.8e-23 113.6 155 49.0
Zm00001d045865 Zea mays B73 HOM04x5M004483 ORTHO04x5M021890 1.2e-13 81.6 111 49.5
Pgl_GLEAN_10023950 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 1.3e-12 78.2 47 83.0
evm.TU.AsparagusV1_01.70.V1.1 Asparagus officinalis HOM04x5M001647 ORTHO04x5M039403 1.1e-06 58.5 37 70.3
evm.TU.AsparagusV1_04.1246.V1.1 Asparagus officinalis HOM04x5M005851 ORTHO04x5M007066 1.1e-06 58.5 37 70.3

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings