Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
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Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sobic.007G209400 Sorghum bicolor HOM04x5M002412 ORTHO04x5M002551 1.7e-172 608.2 377 100.0
Sspon.06G0001760-1A Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 3.3e-160 567.4 381 89.0
Sspon.06G0001760-2B Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 2.8e-159 564.3 380 94.5
Misin13G182100 Miscanthus sinensis HOM04x5M002412 ORTHO04x5M002551 3.6e-159 563.9 381 88.7
Sspon.06G0001760-3C Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 4.4e-157 557.0 383 94.5
Sspon.06G0001760-4D Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 2.4e-155 551.2 380 93.9
Zm00001d052895 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 4.3e-136 487.3 381 74.8
Zm00007a00029929 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 1.6e-135 485.3 381 74.8
TraesCS7D02G245900 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.7e-103 379.0 387 59.7
TraesCS7B02G144200 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 4.8e-103 377.5 394 59.4
TRITD7Bv1G067520 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 1.8e-102 375.6 394 59.1
TraesCS7A02G247300 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 8.5e-100 366.7 396 57.8
TRITD7Av1G093150 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 8.5e-100 366.7 396 57.8
Zm00008a018045 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 1.6e-98 362.5 385 60.8
Bradi3g40070 Brachypodium distachyon HOM04x5M002412 ORTHO04x5M002551 2.6e-93 345.1 393 55.2
LP013033 Lolium perenne HOM04x5M002412 ORTHO04x5M002551 9.4e-91 336.7 381 56.7
Zjn_sc00015.1.g05520.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 1.4e-89 332.8 387 54.8
OB08G26970 Oryza brachyantha HOM04x5M002412 ORTHO04x5M002551 8.8e-89 330.1 404 59.2
PH01001573G0110 Phyllostachys edulis HOM04x5M002412 ORTHO04x5M002551 1.3e-87 326.2 314 60.8
LOC_Os08g39990 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 9.1e-86 320.1 405 59.3
OsR498G0816446400.01 Oryza sativa ssp. indica HOM04x5M002412 ORTHO04x5M002551 3.5e-85 318.2 259 69.5
Sobic.002G248700 Sorghum bicolor HOM04x5M002412 ORTHO04x5M002551 1.3e-84 316.2 389 50.4
TraesCS5D02G274500 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.3e-84 316.2 389 52.2
TraesCS5B02G266300 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 2.2e-84 315.5 388 52.1
TRITD5Bv1G149550 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 2.2e-84 315.5 388 52.1
LP030105 Lolium perenne HOM04x5M002412 ORTHO04x5M002551 1.9e-83 312.4 380 51.6
OsR498G0917731000.01 Oryza sativa ssp. indica HOM04x5M002412 ORTHO04x5M002551 1.9e-83 312.4 387 52.2
TraesCS5A02G266700 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 9.4e-83 310.1 387 51.7
HORVU5Hr1G073600 Hordeum vulgare HOM04x5M002412 ORTHO04x5M002551 1.2e-82 309.7 389 51.4
Bradi4g33830 Brachypodium distachyon HOM04x5M002412 ORTHO04x5M002551 1.6e-82 309.3 388 52.1
LOC_Os09g31458 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 3.6e-82 308.1 387 51.7
Zm00008a009131 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 8.8e-81 303.5 313 57.2
Zm00001d006031 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 1.3e-79 299.7 315 55.9
Zm00007a00028357 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 4.8e-79 297.7 315 55.6
TRITD5Av1G160070 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 1.6e-77 292.7 387 50.1
MisinT266100 Miscanthus sinensis HOM04x5M002412 ORTHO04x5M002551 1.2e-74 283.1 394 47.0
Sspon.06G0001760-2P Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 6.8e-73 277.3 392 46.2
Sspon.06G0001760-1P Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 7.5e-72 273.9 390 45.9
Misin04G230000 Miscanthus sinensis HOM04x5M002412 ORTHO04x5M002551 1.3e-71 273.1 392 45.9
Zm00001d020948 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 3.1e-70 268.5 398 44.7
Zm00007a00035266 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 3.1e-70 268.5 398 44.7
Zjn_sc00008.1.g09320.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 5.4e-70 267.7 313 50.5
Zm00001d045948 Zea mays B73 HOM04x5M000039 ORTHO04x5M002551 2.9e-68 261.9 312 52.2
Zm00007a00028008 Zea mays B104 HOM04x5M000039 ORTHO04x5M002551 2.9e-68 261.9 312 52.2
CALSI_Maker00035014 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 5.0e-60 234.6 317 47.6
CALSI_Maker00024525 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 5.0e-60 234.6 317 47.6
CALSI_Maker00032976 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 2.1e-58 229.2 314 45.2
Zm00001d043192 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 2.1e-58 229.2 303 49.5
Zm00007a00022663 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 2.1e-58 229.2 303 49.5
Aco000750 Ananas comosus HOM04x5M002412 ORTHO04x5M002551 4.0e-57 224.9 258 49.2
p5.00_sc00037_p0128 Elaeis guineensis HOM04x5M002412 ORTHO04x5M002551 4.0e-57 224.9 322 45.7
Ma08_g25090 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 1.5e-56 223.0 320 45.0
Ma09_g12010 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 3.4e-56 221.9 250 50.8
PH01001286G0020 Phyllostachys edulis HOM04x5M002412 ORTHO04x5M002767 1.7e-52 209.5 221 58.8
Spipo12G0038000 Spirodela polyrhiza HOM04x5M002412 ORTHO04x5M002551 5.6e-51 204.5 317 41.0
Ma06_g38250 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 1.2e-50 203.4 323 42.7
p5.00_sc00131_p0014 Elaeis guineensis HOM04x5M002412 ORTHO04x5M002551 3.6e-50 201.8 316 42.1
Ma05_g24710 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 2.6e-48 195.7 310 41.6
Spipo0G0076700 Spirodela polyrhiza HOM04x5M002412 ORTHO04x5M002551 3.2e-46 188.7 311 39.5
PEQU_14985 Phalaenopsis equestris HOM04x5M002412 ORTHO04x5M002551 5.1e-44 181.4 383 35.5
Aco018516 Ananas comosus HOM04x5M002412 ORTHO04x5M002551 1.5e-43 179.9 316 45.9
Ma04_g25960 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 2.1e-42 176.0 375 36.8
AT3G57990 Arabidopsis thaliana HOM04x5M002412 ORTHO04x5M002551 2.8e-42 175.6 308 38.3
Potri.006G191800 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 4.7e-42 174.9 310 36.8
Zm00008a028438 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 1.4e-41 173.3 393 35.9
HORVU7Hr1G050870 Hordeum vulgare HOM04x5M002412 ORTHO04x5M002551 3.1e-41 172.2 266 45.5
Zosma45g00520 Zostera marina HOM04x5M002412 ORTHO04x5M002551 3.1e-41 172.2 317 35.6
Potri.T110800 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 1.2e-40 170.2 306 35.9
Solyc10g080470.1 Solanum lycopersicum HOM04x5M002412 ORTHO04x5M002551 3.4e-40 168.7 313 34.8
Potri.016G046900 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 4.4e-40 168.3 306 35.6
ATR0605G156 Amborella trichopoda HOM04x5M002412 ORTHO04x5M002551 4.6e-37 158.3 302 33.1
GSVIVG01033512001 Vitis vinifera HOM04x5M002412 ORTHO04x5M002551 3.6e-34 148.7 217 41.9
Oropetium_20150105_05499 Oropetium thomaeum HOM04x5M002412 ORTHO04x5M002551 6.2e-34 147.9 240 41.7
OB09G21400 Oryza brachyantha HOM04x5M002412 ORTHO04x5M002551 1.7e-31 139.8 390 33.3
Zosma221g00080 Zostera marina HOM04x5M002412 ORTHO04x5M002551 2.2e-31 139.4 265 37.4
PAB00042622 Picea abies HOM04x5M002412 ORTHO04x5M002551 1.9e-30 136.3 358 29.6
ATR0049G071 Amborella trichopoda HOM04x5M002412 ORTHO04x5M002551 2.1e-29 132.9 310 30.3
Pp3c4_23000 Physcomitrium patens HOM04x5M002412 ORTHO04x5M002551 8.1e-26 120.9 119 52.9
Pp3c26_2720 Physcomitrium patens HOM04x5M002412 ORTHO04x5M002551 1.8e-25 119.8 118 53.4
Zm00008a037452 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 6.9e-25 117.9 148 51.4
p5.00_sc00002_p0114 Elaeis guineensis HOM04x5M002412 ORTHO04x5M002551 1.2e-24 117.1 251 34.3
Seita.2G254800 Setaria italica HOM04x5M002412 ORTHO04x5M002551 3.4e-24 115.5 200 42.0
Spipo5G0060300 Spirodela polyrhiza HOM04x5M002412 ORTHO04x5M002551 9.9e-24 114.0 248 33.1
Mapoly0061s0112 Marchantia polymorpha HOM04x5M002412 ORTHO04x5M002551 3.8e-23 112.1 142 42.3
Pgl_GLEAN_10009994 Cenchrus americanus HOM04x5M002412 ORTHO04x5M002551 6.4e-23 111.3 195 40.0
gene10433 Selaginella moellendorffii HOM04x5M002412 ORTHO04x5M002551 7.1e-22 107.8 330 29.1
Pgl_GLEAN_10002438 Cenchrus americanus HOM04x5M002412 ORTHO04x5M002551 1.7e-20 103.2 157 48.4
TRITD5Bv1G106560 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 2.3e-20 102.8 252 31.3
TraesCS5B02G170300 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 3.0e-20 102.4 252 31.3
CALSI_Maker00040825 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 1.1e-19 100.5 100 50.0
TraesCS5D02G177400 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.9e-19 99.8 252 31.0
TraesCS5A02G172900 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 5.6e-19 98.2 252 31.3
HORVU5Hr1G053060 Hordeum vulgare HOM04x5M002412 ORTHO04x5M002551 9.6e-19 97.4 252 31.3
Potri.003G088500 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 1.4e-17 93.6 285 28.1
GSVIVG01013169001 Vitis vinifera HOM04x5M002412 ORTHO04x5M002551 4.9e-15 85.1 275 28.7
evm.TU.AsparagusV1_04.1736.V1.1 Asparagus officinalis HOM04x5M002412 ORTHO04x5M002551 2.4e-14 82.8 250 30.4
Potri.001G145400 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 2.7e-13 79.3 360 25.6
LOC_Os09g10690 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 6.0e-13 78.2 244 26.6
OsR498G0916902900.01 Oryza sativa ssp. indica HOM04x5M002412 ORTHO04x5M002551 6.0e-13 78.2 244 26.6
PH01000770G0030 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 8.7e-12 74.3 199 33.7
LOC_Os04g48600 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 1.5e-11 73.6 78 57.7
PH01001791G0500 Phyllostachys edulis HOM04x5M002412 ORTHO04x5M002551 4.0e-09 65.5 62 51.6
LOC_Os06g30960 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M129426 2.0e-08 63.2 62 54.8
LOC_Os11g38450 Oryza sativa ssp. japonica HOM04x5M006374 ORTHO04x5M007929 2.6e-08 62.8 48 64.6

Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (3 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (5 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (6 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (1 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (9 genes)
Triticum turgidum (5 genes)
Vitis vinifera (2 genes)
Zea mays B73 (5 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (4 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)