Interactive Phylogenetics Module

Gene Id
Sobic.003G171400

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sobic.003G171400 Sorghum bicolor HOM04x5M004235 ORTHO04x5M004910 0.0e+00 2039.6 1180 100.0
Sspon.03G0008820-1A Saccharum spontaneum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1911.0 1196 90.5
Sspon.03G0008820-2B Saccharum spontaneum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1892.1 1169 91.4
Sspon.03G0008830-1A Saccharum spontaneum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1859.7 1196 88.8
Seita.5G180700 Setaria italica HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1843.6 1182 87.3
Sspon.03G0008820-1P Saccharum spontaneum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1686.8 1069 90.5
Bradi2g13730 Brachypodium distachyon HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1621.7 1184 73.2
OsR498G0101112100.01 Oryza sativa ssp. indica HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1617.1 1187 78.1
TRITD3Av1G117080 Triticum turgidum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1578.5 1187 72.1
TraesCS3B02G228000 Triticum aestivum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1552.0 1187 71.2
TraesCS3D02G196800 Triticum aestivum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1533.5 1187 70.5
TRITD3Bv1G108230 Triticum turgidum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1445.3 1187 67.6
Zm00008a030606 Zea mays PH207 HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1439.9 1060 81.0
LOC_Os01g33060 Oryza sativa ssp. japonica HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1393.6 1036 78.2
OB01G27190 Oryza brachyantha HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1385.9 1036 78.4
p5.00_sc00008_p0064 Elaeis guineensis HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1334.3 1190 61.9
Ma04_g06740 Musa acuminata HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1305.4 1184 63.3
CALSI_Maker00032109 Calamus simplicifolius HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1304.7 1196 60.9
Ma04_g13700 Musa acuminata HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1273.5 1175 60.1
TraesCS3A02G198700 Triticum aestivum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1270.8 885 75.9
Zm00007a00022699 Zea mays B104 HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1194.5 838 85.2
Zm00001d009337 Zea mays B73 HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1192.6 732 85.7
AT5G16210 Arabidopsis thaliana HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1159.1 1176 59.5
Zosma10g01700 Zostera marina HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1134.0 1181 53.3
PEQU_18925 Phalaenopsis equestris HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1121.7 1174 57.2
Zosma112g00450 Zostera marina HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1109.7 1185 52.4
Aco018711 Ananas comosus HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1082.8 977 61.5
Oropetium_20150105_25415 Oropetium thomaeum HOM04x5M004235 ORTHO04x5M004910 1.6e-306 1055.0 1188 60.6
Zjn_sc00156.1.g00280.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004235 ORTHO04x5M004910 1.6e-301 1038.5 1079 56.8
GSVIVG01030979001 Vitis vinifera HOM04x5M004235 ORTHO04x5M004910 1.1e-299 1032.3 1020 63.1
ASH_gene5899 Apostasia shenzhenica HOM04x5M004235 ORTHO04x5M004910 1.1e-297 1025.8 1266 53.1
ATR0681G033 Amborella trichopoda HOM04x5M004235 ORTHO04x5M004910 1.4e-297 1025.4 1033 61.5
Potri.004G095900 Populus trichocarpa HOM04x5M004235 ORTHO04x5M004910 3.1e-297 1024.2 1007 57.5
Spipo18G0037100 Spirodela polyrhiza HOM04x5M004235 ORTHO04x5M004910 1.3e-284 982.2 1020 58.7
Pgl_GLEAN_10003830 Cenchrus americanus HOM04x5M004235 ORTHO04x5M004910 3.5e-277 957.6 1180 51.4
Mapoly0103s0005 Marchantia polymorpha HOM04x5M004235 ORTHO04x5M004910 1.8e-257 892.1 1172 50.1
Solyc02g086340.2 Solanum lycopersicum HOM04x5M004235 ORTHO04x5M004910 1.8e-244 849.0 945 58.9
Pp3c18_21770 Physcomitrium patens HOM04x5M004235 ORTHO04x5M004910 4.3e-243 844.3 1175 43.0
Misin06G150400 Miscanthus sinensis HOM04x5M004235 ORTHO04x5M004910 4.1e-233 811.2 426 97.2
Pp3c18_21850 Physcomitrium patens HOM04x5M004235 ORTHO04x5M004910 7.0e-225 783.9 1055 43.2
gene4661 Selaginella moellendorffii HOM04x5M004235 ORTHO04x5M004910 1.2e-219 766.5 1156 41.9
gene35017 Selaginella moellendorffii HOM04x5M004235 ORTHO04x5M004910 3.3e-219 765.0 1171 41.3
Pp3c3_38010 Physcomitrium patens HOM04x5M004235 ORTHO04x5M004910 8.3e-202 707.2 1133 44.5
Pgl_GLEAN_10000163 Cenchrus americanus HOM04x5M004235 ORTHO04x5M004910 2.0e-192 676.0 723 56.4
HORVU2Hr1G061110 Hordeum vulgare HOM04x5M004235 ORTHO04x5M004910 1.8e-188 662.9 436 78.0
PAB00016876 Picea abies HOM04x5M004235 ORTHO04x5M004910 2.5e-126 456.4 305 72.5
HORVU3Hr1G043640 Hordeum vulgare HOM04x5M004235 ORTHO04x5M004910 2.2e-125 453.4 488 68.6
Misin05G160200 Miscanthus sinensis HOM04x5M004235 ORTHO04x5M004910 1.1e-118 431.0 234 94.0
Zm00001d009336 Zea mays B73 HOM04x5M004235 ORTHO04x5M004910 5.5e-113 412.1 222 93.7
TraesCS3A02G198800 Triticum aestivum HOM04x5M004235 ORTHO04x5M004910 1.1e-92 344.7 255 74.5
Zm00007a00022697 Zea mays B104 HOM04x5M004235 ORTHO04x5M004910 5.0e-82 309.3 169 93.5
Misin06G150500 Miscanthus sinensis HOM04x5M004235 ORTHO04x5M004910 3.3e-73 280.0 240 93.8
PAB00016317 Picea abies HOM04x5M004235 ORTHO04x5M004910 7.3e-57 225.7 210 58.6
HORVU3Hr1G043690 Hordeum vulgare HOM04x5M004235 ORTHO04x5M004910 3.6e-48 196.8 127 81.1
Zjn_sc00156.1.g00285.1.br Zoysia japonica ssp. nagirizaki HOM04x5M004235 ORTHO04x5M004910 3.4e-46 190.3 120 82.5
GSVIVG01030980001 Vitis vinifera HOM04x5M004235 ORTHO04x5M004910 1.3e-42 178.3 145 66.9
PH01000404G0290 Phyllostachys edulis HOM04x5M004235 ORTHO04x5M004910 2.8e-40 170.6 103 85.4
ATR0681G242 Amborella trichopoda HOM04x5M004235 ORTHO04x5M004910 4.6e-35 153.3 159 54.7
Spipo18G0037200 Spirodela polyrhiza HOM04x5M004235 ORTHO04x5M004910 4.6e-35 153.3 136 61.8
Misin06G150600 Miscanthus sinensis HOM04x5M004235 ORTHO04x5M004910 1.8e-34 151.4 77 97.4
PH01004645G0100 Phyllostachys edulis HOM04x5M004235 ORTHO04x5M004910 7.6e-30 136.0 118 62.7
Cre03.g205137 Chlamydomonas reinhardtii HOM04x5M004235 ORTHO04x5M004910 3.2e-28 130.6 188 38.8
Solyc02g086320.1 Solanum lycopersicum HOM04x5M004235 ORTHO04x5M004910 7.9e-19 99.4 88 61.4
PEQU_38627 Phalaenopsis equestris HOM04x5M004235 ORTHO04x5M004910 3.2e-12 77.4 82 50.0
PH01000404G0310 Phyllostachys edulis HOM04x5M004235 ORTHO04x5M004910 2.1e-11 74.7 45 73.3
MCO16G648 Micromonas commoda HOM04x5M004235 ORTHO04x5M004910 1.4e-07 62.0 140 26.4

Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (3 genes)
Lolium perenne (0 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (3 genes)
Picea abies (2 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (4 genes)
Triticum turgidum (2 genes)
Vitis vinifera (2 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings