Interactive Phylogenetics Module

Gene Id
Sobic.003G171300

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sobic.003G171300 Sorghum bicolor HOM04x5M020240 ORTHO04x5M021077 4.0e-53 209.9 114 100.0
Sobic.001G271700 Sorghum bicolor HOM04x5M000840 ORTHO04x5M000161 3.7e-30 133.7 70 97.1
Sobic.003G086000 Sorghum bicolor HOM04x5M000840 ORTHO04x5M000161 3.7e-30 133.7 70 97.1
Sspon.05G0036990-1D Saccharum spontaneum HOM04x5M000840 ORTHO04x5M000161 1.0e-19 99.0 69 68.1
Zm00007a00013698 Zea mays B104 HOM04x5M000840 ORTHO04x5M000161 2.1e-17 91.3 87 50.6
Zm00001d049953 Zea mays B73 HOM04x5M000840 ORTHO04x5M000995 4.6e-17 90.1 70 58.6
Zm00001d036983 Zea mays B73 HOM04x5M000840 ORTHO04x5M000995 4.6e-17 90.1 70 58.6
Zm00001d046375 Zea mays B73 HOM04x5M000840 ORTHO04x5M000995 4.6e-17 90.1 70 58.6
Zm00007a00013413 Zea mays B104 HOM04x5M000840 ORTHO04x5M000995 4.6e-17 90.1 70 58.6
Zm00007a00009753 Zea mays B104 HOM04x5M000840 ORTHO04x5M000995 4.6e-17 90.1 70 58.6
Sobic.006G012100 Sorghum bicolor HOM04x5M000840 ORTHO04x5M000161 1.3e-16 88.6 55 72.7
Pgl_GLEAN_10029707 Cenchrus americanus HOM04x5M000840 ORTHO04x5M000161 6.3e-14 79.7 70 55.7
Pgl_GLEAN_10003505 Cenchrus americanus HOM04x5M000840 ORTHO04x5M000995 6.3e-14 79.7 70 55.7
Seita.7G068000 Setaria italica HOM04x5M000840 ORTHO04x5M000161 2.4e-13 77.8 69 56.5
Sspon.02G0017840-1A Saccharum spontaneum HOM04x5M000840 ORTHO04x5M000161 8.5e-11 69.3 44 70.5
Sspon.01G0005710-1A Saccharum spontaneum HOM04x5M000840 ORTHO04x5M000161 2.7e-09 64.3 45 62.2
MisinT045300 Miscanthus sinensis HOM04x5M020240 ORTHO04x5M021077 4.6e-09 63.5 37 81.1
Misin10G143000 Miscanthus sinensis HOM04x5M020240 ORTHO04x5M021077 1.4e-08 62.0 37 78.4
Zm00001d004788 Zea mays B73 HOM04x5M000840 ORTHO04x5M000161 5.7e-07 56.6 44 54.5

Amborella trichopoda (0 genes)
Ananas comosus (0 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (0 genes)
Calamus simplicifolius (0 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (0 genes)
Hordeum vulgare (0 genes)
Lolium perenne (0 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (0 genes)
Oryza brachyantha (0 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (0 genes)
Phalaenopsis equestris (0 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Picea abies (0 genes)
Populus trichocarpa (0 genes)
Saccharum spontaneum (3 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (1 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (4 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (0 genes)
Triticum turgidum (0 genes)
Vitis vinifera (0 genes)
Zea mays B73 (4 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (0 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings