Interactive Phylogenetics Module

Gene Id
Sobic.003G134800

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sobic.003G134800 Sorghum bicolor HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1824.7 951 100.0
Sspon.03G0016320-1A Saccharum spontaneum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1817.4 951 99.5
Sspon.03G0016320-3D Saccharum spontaneum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1812.7 949 99.4
Sspon.03G0016320-2C Saccharum spontaneum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1810.8 951 99.1
Misin05G131600 Miscanthus sinensis HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1808.1 951 99.1
Zm00008a011610 Zea mays PH207 HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1808.1 951 99.2
Misin06G114700 Miscanthus sinensis HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1805.4 951 98.8
Zm00001d008218 Zea mays B73 HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1793.1 951 98.4
Zm00008a029800 Zea mays PH207 HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1793.1 951 98.4
Seita.5G038000 Setaria italica HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1791.9 951 98.1
Zm00007a00016409 Zea mays B104 HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1791.9 951 98.3
Pgl_GLEAN_10034437 Cenchrus americanus HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1774.6 952 97.3
Bradi2g10950 Brachypodium distachyon HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1721.4 951 93.5
LOC_Os01g17430 Oryza sativa ssp. japonica HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1717.6 951 93.3
OsR498G0100676000.01 Oryza sativa ssp. indica HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1716.4 951 93.2
LP010756 Lolium perenne HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1711.0 951 93.0
PH01001615G0130 Phyllostachys edulis HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1701.0 963 91.9
TraesCS3B02G221200 Triticum aestivum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1701.0 951 92.3
LP015406 Lolium perenne HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1700.3 951 92.2
TraesCS3D02G195500 Triticum aestivum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1699.5 951 92.4
Bradi2g10910 Brachypodium distachyon HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1698.7 950 92.2
OB01G21580 Oryza brachyantha HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1696.0 951 92.0
OB11G13770 Oryza brachyantha HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1690.2 952 91.4
TRITD3Bv1G098220 Triticum turgidum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1689.1 951 91.8
TraesCS3D02G195600 Triticum aestivum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1683.3 951 91.7
OsR498G1119497200.01 Oryza sativa ssp. indica HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1681.8 952 91.4
TraesCS3A02G193200 Triticum aestivum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1671.4 952 91.2
Oropetium_20150105_00390 Oropetium thomaeum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1670.6 951 90.6
HORVU3Hr1G040350 Hordeum vulgare HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1656.3 951 90.2
Zjn_sc00031.1.g02180.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1651.3 951 89.3
TraesCS3A02G192400 Triticum aestivum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1634.0 951 89.6
Seita.5G398100 Setaria italica HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1622.1 953 88.6
Zm00007a00000580 Zea mays B104 HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1620.1 860 98.5
Misin09G057300 Miscanthus sinensis HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1619.4 950 89.1
Zm00001d040503 Zea mays B73 HOM04x5M001781 ORTHO04x5M000256 0.0e+00 1618.2 854 98.9
Misin10G042300 Miscanthus sinensis HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1615.1 952 88.6
Pgl_GLEAN_10031692 Cenchrus americanus HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1611.7 951 88.0
Sspon.05G0018350-1A Saccharum spontaneum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1604.7 952 88.4
Zm00001d004807 Zea mays B73 HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1586.2 952 87.2
Zm00007a00021531 Zea mays B104 HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1584.7 952 87.1
Zm00008a008195 Zea mays PH207 HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1584.7 952 87.1
TRITD3Av1G102330 Triticum turgidum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1576.2 952 86.8
TRITD3Bv1G097990 Triticum turgidum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1574.7 883 91.8
p5.00_sc00077_p0095 Elaeis guineensis HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1566.6 952 83.8
LOC_Os11g07280 Oryza sativa ssp. japonica HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1563.9 885 91.2
Zjn_sc00144.1.g00520.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1562.7 952 86.1
Sobic.K020500 Sorghum bicolor HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1557.7 818 99.9
Sspon.05G0018350-2B Saccharum spontaneum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1557.7 922 88.4
Sspon.05G0018350-3C Saccharum spontaneum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1555.0 929 87.2
Ma07_g15810 Musa acuminata HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1550.4 954 84.1
Ma10_g23310 Musa acuminata HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1549.3 954 83.6
TRITD3Av1G099720 Triticum turgidum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1543.1 866 91.9
ASH_gene14627 Apostasia shenzhenica HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1538.5 952 82.4
p5.00_sc00019_p0195 Elaeis guineensis HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1538.5 952 83.3
Aco012066 Ananas comosus HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1534.2 952 83.1
Ma06_g05380 Musa acuminata HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1533.5 954 83.1
PEQU_08221 Phalaenopsis equestris HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1525.0 952 81.7
p5.00_sc00005_p0240 Elaeis guineensis HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1520.8 952 82.1
CALSI_Maker00035361 Calamus simplicifolius HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1515.4 950 81.5
Spipo10G0055900 Spirodela polyrhiza HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1512.3 954 81.2
TraesCS3B02G221400 Triticum aestivum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1510.4 855 91.5
ATR0605G160 Amborella trichopoda HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1496.9 954 79.9
Potri.018G007400 Populus trichocarpa HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1484.5 953 80.0
Potri.006G273300 Populus trichocarpa HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1484.2 953 79.9
Solyc01g007150.2 Solanum lycopersicum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1482.2 952 78.6
Zosma19g00590 Zostera marina HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1449.1 952 77.2
Solyc10g081920.1 Solanum lycopersicum HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1436.8 915 79.5
CALSI_Maker00012087 Calamus simplicifolius HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1421.8 958 78.7
AT4G31480 Arabidopsis thaliana HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1421.0 952 76.1
AT4G31490 Arabidopsis thaliana HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1420.2 952 76.1
Zosma19g00600 Zostera marina HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1405.2 916 77.6
PH01000049G0320 Phyllostachys edulis HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1401.3 951 80.1
GSVIVG01035511001 Vitis vinifera HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1381.3 952 75.9
Mapoly0086s0049 Marchantia polymorpha HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1362.1 956 73.3
Pp3c7_8430 Physcomitrium patens HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1343.2 955 72.1
gene34736 Selaginella moellendorffii HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1340.9 951 71.7
gene32429 Selaginella moellendorffii HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1340.1 951 71.7
Pp3c6_720 Physcomitrium patens HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1320.4 956 71.1
GSVIVG01016151001 Vitis vinifera HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1318.5 951 71.4
Pp3c25_10770 Physcomitrium patens HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1303.5 955 70.8
PH01000095G0200 Phyllostachys edulis HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1212.2 952 70.2
HORVU3Hr1G040270 Hordeum vulgare HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1181.0 684 89.6
Cre04.g217921 Chlamydomonas reinhardtii HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1116.7 958 63.3
MCO07G642 Micromonas commoda HOM04x5M001781 ORTHO04x5M003251 0.0e+00 1075.1 968 58.7
evm.TU.AsparagusV1_01.921.V1.1 Asparagus officinalis HOM04x5M001781 ORTHO04x5M003251 3.9e-311 1070.1 638 85.6
TraesCS3B02G291400 Triticum aestivum HOM04x5M001781 ORTHO04x5M016023 2.8e-301 1037.3 892 63.3
TRITD3Bv1G152600 Triticum turgidum HOM04x5M001781 ORTHO04x5M016023 4.1e-300 1033.5 892 63.1
TraesCS5B02G070700 Triticum aestivum HOM04x5M001781 ORTHO04x5M016023 1.5e-294 1015.0 959 60.2
TRITD3Bv1G268160 Triticum turgidum HOM04x5M001781 ORTHO04x5M221856 3.2e-289 997.3 927 60.0
TraesCS5B02G070600 Triticum aestivum HOM04x5M001781 ORTHO04x5M016023 9.4e-281 969.1 960 58.9
PH01005629G0060 Phyllostachys edulis HOM04x5M001781 ORTHO04x5M163560 9.8e-270 932.6 599 85.3
PAB00033392 Picea abies HOM04x5M001781 ORTHO04x5M003251 6.6e-266 919.8 692 69.5
PAB00011005 Picea abies HOM04x5M001781 ORTHO04x5M003251 7.5e-254 879.8 613 74.9
LP000198 Lolium perenne HOM04x5M001781 ORTHO04x5M003251 2.1e-243 845.1 593 77.9
HORVU3Hr1G111730 Hordeum vulgare HOM04x5M001781 ORTHO04x5M016023 3.1e-231 804.7 727 61.6
PAB00011570 Picea abies HOM04x5M001781 ORTHO04x5M003251 4.2e-228 794.3 578 71.5
TRITD1Bv1G102700 Triticum turgidum HOM04x5M001781 ORTHO04x5M221079 3.1e-151 538.9 946 38.3
PH01004212G0010 Phyllostachys edulis HOM04x5M001781 ORTHO04x5M163462 1.0e-146 523.9 386 74.6
Zm00007a00017271 Zea mays B104 HOM04x5M001781 ORTHO04x5M012522 5.0e-141 505.0 265 95.8
TRITD5Bv1G029300 Triticum turgidum HOM04x5M001781 ORTHO04x5M016023 1.2e-139 500.4 399 66.2
evm.TU.AsparagusV1_01.920.V1.1 Asparagus officinalis HOM04x5M001781 ORTHO04x5M003251 3.2e-135 485.7 360 69.7
CALSI_Maker00029638 Calamus simplicifolius HOM04x5M001781 ORTHO04x5M012522 7.1e-127 458.0 244 94.7
PAB00011569 Picea abies HOM04x5M001781 ORTHO04x5M012522 1.9e-124 449.9 253 88.5
PAB00040558 Picea abies HOM04x5M001781 ORTHO04x5M012522 8.7e-109 397.9 264 75.4
PAB00051922 Picea abies HOM04x5M001781 ORTHO04x5M003251 7.3e-108 394.8 297 69.0
PAB00007188 Picea abies HOM04x5M001781 ORTHO04x5M160033 1.7e-67 260.8 188 72.9
Pp3c11_24980 Physcomitrium patens HOM04x5M001781 ORTHO04x5M178184 4.1e-66 256.1 543 35.4
PAB00060480 Picea abies HOM04x5M001781 ORTHO04x5M012522 5.0e-64 249.2 134 89.6
CALSI_Maker00012230 Calamus simplicifolius HOM04x5M001781 ORTHO04x5M064227 1.7e-59 234.2 168 75.0
Zm00007a00000579 Zea mays B104 HOM04x5M001781 ORTHO04x5M012522 1.9e-47 194.1 98 99.0
HORVU3Hr1G040280 Hordeum vulgare HOM04x5M001781 ORTHO04x5M012522 4.7e-46 189.5 98 96.9
evm.TU.AsparagusV1_05.3519.V1.1 Asparagus officinalis HOM04x5M001781 ORTHO04x5M012522 8.0e-46 188.7 98 91.8
PH01006917G0030 Phyllostachys edulis HOM04x5M001781 ORTHO04x5M162382 6.8e-37 159.1 86 93.0
Sspon.01G0021990-2B Saccharum spontaneum HOM04x5M001781 ORTHO04x5M012168 5.0e-32 142.9 490 28.8
Sspon.01G0021990-3C Saccharum spontaneum HOM04x5M001781 ORTHO04x5M012168 1.5e-31 141.4 479 29.0
Sspon.01G0021990-1A Saccharum spontaneum HOM04x5M001781 ORTHO04x5M012168 7.3e-31 139.0 479 29.0
Zm00001d033097 Zea mays B73 HOM04x5M001781 ORTHO04x5M012168 4.0e-29 133.3 507 29.6
Zm00007a00014495 Zea mays B104 HOM04x5M001781 ORTHO04x5M012168 4.0e-29 133.3 507 29.6
PH01000095G0180 Phyllostachys edulis HOM04x5M001781 ORTHO04x5M012522 2.6e-28 130.6 67 97.0
PH01021604G0010 Phyllostachys edulis HOM04x5M001781 ORTHO04x5M012522 2.6e-28 130.6 67 97.0
Sobic.001G189100 Sorghum bicolor HOM04x5M001781 ORTHO04x5M012168 2.2e-27 127.5 489 27.8
Zm00001d024876 Zea mays B73 HOM04x5M001781 ORTHO04x5M012168 9.5e-23 112.1 494 26.1
PH01018897G0010 Phyllostachys edulis HOM04x5M001781 ORTHO04x5M012522 1.2e-22 111.7 57 96.5
PH01003929G0010 Phyllostachys edulis HOM04x5M002376 ORTHO04x5M002448 2.8e-22 110.5 126 50.8
PEQU_15228 Phalaenopsis equestris HOM04x5M001781 ORTHO04x5M167243 7.5e-20 102.4 82 62.2
Seita.2G100500 Setaria italica HOM04x5M001781 ORTHO04x5M012168 2.4e-18 97.4 375 29.3
Misin02G156300 Miscanthus sinensis HOM04x5M001781 ORTHO04x5M012168 2.0e-17 94.4 273 30.8
Zm00007a00032435 Zea mays B104 HOM04x5M001781 ORTHO04x5M012168 2.8e-14 84.0 347 27.1
evm.TU.AsparagusV1_07.2091.V1.1 Asparagus officinalis HOM04x5M001781 ORTHO04x5M012522 5.2e-13 79.7 83 51.8
Bradi5g01832 Brachypodium distachyon HOM04x5M001781 ORTHO04x5M012168 4.1e-10 70.1 219 32.9
Misin12G017900 Miscanthus sinensis HOM04x5M001781 ORTHO04x5M012168 4.1e-10 70.1 158 32.9
Bradi1g56697 Brachypodium distachyon HOM04x5M001781 ORTHO04x5M012168 1.5e-07 61.6 175 35.4
AT1G31730 Arabidopsis thaliana HOM04x5M000870 ORTHO04x5M007181 5.6e-07 59.7 442 21.0
ATR0069G035 Amborella trichopoda HOM04x5M000870 ORTHO04x5M007181 9.5e-07 58.9 422 20.6
CALSI_Maker00018487 Calamus simplicifolius HOM04x5M000870 ORTHO04x5M007181 2.1e-06 57.8 402 22.6
GSVIVG01036887001 Vitis vinifera HOM04x5M000870 ORTHO04x5M007181 6.2e-06 56.2 422 20.9
gene10478 Selaginella moellendorffii HOM04x5M000870 ORTHO04x5M007181 8.1e-06 55.8 418 21.3

Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (4 genes)
Calamus simplicifolius (5 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (4 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (10 genes)
Physcomitrium patens (4 genes)
Picea abies (8 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (9 genes)
Selaginella moellendorffii (3 genes)
Setaria italica (3 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (9 genes)
Triticum turgidum (8 genes)
Vitis vinifera (3 genes)
Zea mays B73 (5 genes)
Zea mays B104 (7 genes)
Zea mays PH207 (3 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings