Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Interactive Phylogenetics Module

Gene Id: Sobic.002G341100

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Sobic.002G341100	Sorghum bicolor	HOM04x5M006888	ORTHO04x5M008419	1.3e-240	835.1	547	100.0
MisinT311500	Miscanthus sinensis	HOM04x5M006888	ORTHO04x5M008419	5.6e-223	776.5	532	97.6
Sspon.02G0005140-1A	Saccharum spontaneum	HOM04x5M006888	ORTHO04x5M008419	2.8e-222	774.2	532	97.4
Sspon.02G0005140-2B	Saccharum spontaneum	HOM04x5M006888	ORTHO04x5M008419	6.2e-222	773.1	532	97.4
Misin03G324100	Miscanthus sinensis	HOM04x5M006888	ORTHO04x5M008419	2.1e-209	731.5	532	94.4
Zm00001d006606	Zea mays B73	HOM04x5M006888	ORTHO04x5M000946	5.1e-208	726.9	545	90.8
Zm00007a00040219	Zea mays B104	HOM04x5M006888	ORTHO04x5M008419	5.8e-204	713.4	532	90.4
Zm00008a029109	Zea mays PH207	HOM04x5M006888	ORTHO04x5M008419	1.6e-198	695.3	522	90.2
Zm00001d021810	Zea mays B73	HOM04x5M000354	ORTHO04x5M008419	2.0e-196	688.3	568	84.5
Seita.2G354700	Setaria italica	HOM04x5M006888	ORTHO04x5M008419	5.5e-178	627.1	562	81.0
Zm00008a009570	Zea mays PH207	HOM04x5M006888	ORTHO04x5M008419	2.0e-172	608.6	497	88.1
Pgl_GLEAN_10015811	Cenchrus americanus	HOM04x5M000354	ORTHO04x5M002431	1.9e-138	495.7	541	73.0
OB07G24680	Oryza brachyantha	HOM04x5M006888	ORTHO04x5M008419	1.5e-127	459.5	546	52.2
PH01003906G0090	Phyllostachys edulis	HOM04x5M006888	ORTHO04x5M008419	7.5e-127	457.2	548	53.5
Zm00007a00010553	Zea mays B104	HOM04x5M006888	ORTHO04x5M008419	5.9e-124	447.6	364	93.7
PH01000363G0270	Phyllostachys edulis	HOM04x5M006888	ORTHO04x5M002431	1.0e-107	393.7	514	50.8
Zjn_sc00001.1.g06600.1.sm.mkhc	Zoysia japonica ssp. nagirizaki	HOM04x5M006888	ORTHO04x5M008419	1.6e-105	386.3	547	52.1
Bradi1g24580	Brachypodium distachyon	HOM04x5M006888	ORTHO04x5M008419	1.4e-101	373.2	460	50.9
LP000741	Lolium perenne	HOM04x5M006888	ORTHO04x5M008419	2.3e-99	365.9	460	50.7
LOC_Os07g37800	Oryza sativa ssp. japonica	HOM04x5M006888	ORTHO04x5M008419	4.0e-88	328.6	544	43.0
TraesCS2B02G229800	Triticum aestivum	HOM04x5M006888	ORTHO04x5M008419	4.4e-87	325.1	458	51.5
TRITD2Bv1G083420	Triticum turgidum	HOM04x5M006888	ORTHO04x5M008419	4.4e-87	325.1	458	51.5
TraesCS2A02G202700	Triticum aestivum	HOM04x5M006888	ORTHO04x5M008419	8.4e-86	320.9	458	51.1
TRITD2Av1G074100	Triticum turgidum	HOM04x5M006888	ORTHO04x5M008419	8.4e-86	320.9	458	51.1
TraesCS2D02G213000	Triticum aestivum	HOM04x5M006888	ORTHO04x5M008419	1.4e-85	320.1	639	42.3
Zm00008a026038	Zea mays PH207	HOM04x5M000606	ORTHO04x5M000852	1.6e-68	263.5	190	77.4
Zm00001d031299	Zea mays B73	HOM04x5M006888	ORTHO04x5M008419	5.5e-61	238.4	174	76.4
Zm00001d018373	Zea mays B73	HOM04x5M006888	ORTHO04x5M008419	5.5e-61	238.4	174	76.4
Zm00007a00051158	Zea mays B104	HOM04x5M006888	ORTHO04x5M008419	5.5e-61	238.4	174	76.4
Zm00007a00047365	Zea mays B104	HOM04x5M006888	ORTHO04x5M008419	5.5e-61	238.4	174	76.4
p5.00_sc00154_p0058	Elaeis guineensis	HOM04x5M006888	ORTHO04x5M008419	1.5e-58	230.3	552	35.0
Oropetium_20150105_16539	Oropetium thomaeum	HOM04x5M006888	ORTHO04x5M008419	7.9e-52	208.0	230	54.3
Aco009146	Ananas comosus	HOM04x5M006888	ORTHO04x5M008419	4.8e-41	172.2	589	30.9
CALSI_Maker00044427	Calamus simplicifolius	HOM04x5M006888	ORTHO04x5M008419	6.1e-36	155.2	553	29.7
Zm00001d038498	Zea mays B73	HOM04x5M006888	ORTHO04x5M008419	1.0e-35	154.5	113	77.0
HORVU2Hr1G039990	Hordeum vulgare	HOM04x5M006888	ORTHO04x5M008419	4.0e-35	152.5	463	35.9
Potri.004G036900	Populus trichocarpa	HOM04x5M006888	ORTHO04x5M008419	1.3e-33	147.5	513	28.3
Zm00008a024306	Zea mays PH207	HOM04x5M000032	ORTHO04x5M008419	2.2e-33	146.7	99	78.8
CALSI_Maker00019150	Calamus simplicifolius	HOM04x5M006888	ORTHO04x5M008419	2.8e-33	146.4	406	33.7
AT1G61215	Arabidopsis thaliana	HOM04x5M006888	ORTHO04x5M008419	1.2e-31	141.0	562	27.6
evm.TU.AsparagusV1_03.2223.V1.1	Asparagus officinalis	HOM04x5M006888	ORTHO04x5M008419	1.5e-29	134.0	447	31.3
ATR0693G270	Amborella trichopoda	HOM04x5M002570	ORTHO04x5M002687	1.2e-26	124.4	544	27.2
OsR498G0714588000.01	Oryza sativa ssp. indica	HOM04x5M006888	ORTHO04x5M008419	2.0e-26	123.6	388	32.0
Solyc10g009160.2	Solanum lycopersicum	HOM04x5M006888	ORTHO04x5M008419	1.7e-22	110.5	494	27.1
Spipo14G0058400	Spirodela polyrhiza	HOM04x5M006888	ORTHO04x5M008419	8.5e-22	108.2	541	25.0
Solyc02g078810.2	Solanum lycopersicum	HOM04x5M006888	ORTHO04x5M008419	4.0e-19	99.4	527	26.4
Zjn_sc00008.1.g10910.1.sm.mkhc	Zoysia japonica ssp. nagirizaki	HOM04x5M006888	ORTHO04x5M008419	6.3e-17	92.0	53	84.9
Zm00007a00037760	Zea mays B104	HOM04x5M003042	ORTHO04x5M008419	8.3e-17	91.7	61	80.3
p5.00_sc00259_p0022	Elaeis guineensis	HOM04x5M006888	ORTHO04x5M008419	1.2e-15	87.8	550	24.9
p5.00_sc00259_p0021	Elaeis guineensis	HOM04x5M006888	ORTHO04x5M008419	9.5e-13	78.2	453	25.6
PAB00018157	Picea abies	HOM04x5M002570	ORTHO04x5M002687	2.8e-12	76.6	101	44.6
Sspon.02G0037080-1B	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	1.4e-11	74.3	109	40.4
Bradi3g40060	Brachypodium distachyon	HOM04x5M002570	ORTHO04x5M002687	3.0e-11	73.2	110	40.9
Sspon.02G0037080-2C	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	5.2e-11	72.4	124	36.3
Pp3c17_1160	Physcomitrium patens	HOM04x5M002570	ORTHO04x5M002687	2.6e-10	70.1	116	39.7
Pp3c17_1175	Physcomitrium patens	HOM04x5M002570	ORTHO04x5M002687	2.6e-10	70.1	116	39.7
Zjn_sc00008.1.g09320.1.am.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M002412	ORTHO04x5M002551	2.6e-10	70.1	116	36.2
Zm00001d020947	Zea mays B73	HOM04x5M002570	ORTHO04x5M002687	2.6e-10	70.1	142	34.5
Zm00007a00035265	Zea mays B104	HOM04x5M002570	ORTHO04x5M002687	2.6e-10	70.1	142	34.5
Zm00008a028437	Zea mays PH207	HOM04x5M002570	ORTHO04x5M002687	2.6e-10	70.1	142	34.5
PAB00022580	Picea abies	HOM04x5M002570	ORTHO04x5M002687	9.8e-10	68.2	204	30.4
PAB00062047	Picea abies	HOM04x5M002570	ORTHO04x5M002687	9.8e-10	68.2	204	30.4
Bradi4g33820	Brachypodium distachyon	HOM04x5M002570	ORTHO04x5M002687	1.7e-09	67.4	174	31.6
p5.00_sc00096_p0028	Elaeis guineensis	HOM04x5M002570	ORTHO04x5M002687	1.7e-09	67.4	109	37.6
LOC_Os08g39980	Oryza sativa ssp. japonica	HOM04x5M002570	ORTHO04x5M002687	1.7e-09	67.4	122	36.1
OsR498G0816445800.01	Oryza sativa ssp. indica	HOM04x5M002570	ORTHO04x5M002687	1.7e-09	67.4	122	36.1
Seita.2G254700	Setaria italica	HOM04x5M002570	ORTHO04x5M002687	1.7e-09	67.4	148	33.1
Sobic.002G248600	Sorghum bicolor	HOM04x5M002570	ORTHO04x5M002687	2.9e-09	66.6	144	34.7
Sspon.02G0037080-3D	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	3.7e-09	66.2	146	34.2
Ma09_g18710	Musa acuminata	HOM04x5M002570	ORTHO04x5M002687	4.9e-09	65.9	108	37.0
MisinT266000	Miscanthus sinensis	HOM04x5M002570	ORTHO04x5M002687	4.9e-09	65.9	145	34.5
Seita.6G206100	Setaria italica	HOM04x5M002570	ORTHO04x5M002687	4.9e-09	65.9	121	36.4
HORVU5Hr1G073540	Hordeum vulgare	HOM04x5M002570	ORTHO04x5M002687	1.1e-08	64.7	149	33.6
HORVU5Hr1G073580	Hordeum vulgare	HOM04x5M002570	ORTHO04x5M002687	1.1e-08	64.7	149	33.6
Misin04G229900	Miscanthus sinensis	HOM04x5M002570	ORTHO04x5M002687	1.1e-08	64.7	149	32.9
Zjn_sc00695.1.g00010.1.am.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M006888	ORTHO04x5M008419	1.1e-08	64.7	37	86.5
Ma08_g26310	Musa acuminata	HOM04x5M002570	ORTHO04x5M002687	1.4e-08	64.3	113	34.5
TraesCS7D02G245800	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	1.4e-08	64.3	169	31.4
TraesCS7A02G247200	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	1.8e-08	63.9	161	32.3
p5.00_sc00037_p0129	Elaeis guineensis	HOM04x5M002570	ORTHO04x5M002687	2.4e-08	63.5	107	37.4
OB09G21390	Oryza brachyantha	HOM04x5M002570	ORTHO04x5M002687	2.4e-08	63.5	122	32.8
gene5260	Selaginella moellendorffii	HOM04x5M002570	ORTHO04x5M002687	2.4e-08	63.5	121	31.4
TraesCS7B02G144300	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	2.4e-08	63.5	161	32.9
gene2213	Selaginella moellendorffii	HOM04x5M002570	ORTHO04x5M002687	3.2e-08	63.2	125	31.2
TraesCS5B02G266200	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	4.1e-08	62.8	177	31.6
TRITD5Bv1G149570	Triticum turgidum	HOM04x5M002570	ORTHO04x5M002687	4.1e-08	62.8	177	31.6
HORVU7Hr1G050770	Hordeum vulgare	HOM04x5M002570	ORTHO04x5M002687	5.4e-08	62.4	161	32.9
TraesCS5D02G274400	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	5.4e-08	62.4	151	32.5
Oropetium_20150105_05500	Oropetium thomaeum	HOM04x5M002570	ORTHO04x5M002687	7.0e-08	62.0	105	36.2
AT2G42150	Arabidopsis thaliana	HOM04x5M002570	ORTHO04x5M002687	9.2e-08	61.6	107	33.6
TraesCS5A02G266600	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	9.2e-08	61.6	153	32.0
PH01000594G0730	Phyllostachys edulis	HOM04x5M002570	ORTHO04x5M002687	1.2e-07	61.2	122	33.6
Solyc01g006470.1	Solanum lycopersicum	HOM04x5M002570	ORTHO04x5M002687	1.2e-07	61.2	94	33.0
Zm00001d031454	Zea mays B73	HOM04x5M002570	ORTHO04x5M002687	1.6e-07	60.8	109	36.7
Zm00007a00022852	Zea mays B104	HOM04x5M002570	ORTHO04x5M002687	1.6e-07	60.8	109	36.7
CALSI_Maker00032927	Calamus simplicifolius	HOM04x5M002570	ORTHO04x5M002687	2.0e-07	60.5	111	34.2
Ma09_g12020	Musa acuminata	HOM04x5M002570	ORTHO04x5M002687	2.0e-07	60.5	460	33.0
PH01000150G0150	Phyllostachys edulis	HOM04x5M002570	ORTHO04x5M002687	2.0e-07	60.5	116	32.8
GSVIVG01001371001	Vitis vinifera	HOM04x5M002570	ORTHO04x5M002687	2.7e-07	60.1	111	32.4
LOC_Os09g31454	Oryza sativa ssp. japonica	HOM04x5M002570	ORTHO04x5M002687	3.5e-07	59.7	161	31.1
OsR498G0917730800.01	Oryza sativa ssp. indica	HOM04x5M002570	ORTHO04x5M002687	3.5e-07	59.7	161	31.1
Sobic.007G209500	Sorghum bicolor	HOM04x5M002570	ORTHO04x5M002687	3.5e-07	59.7	112	34.8
p5.00_sc00131_p0015	Elaeis guineensis	HOM04x5M002570	ORTHO04x5M002687	5.9e-07	58.9	133	31.6
p5.00_sc00020_p0160	Elaeis guineensis	HOM04x5M002570	ORTHO04x5M002687	5.9e-07	58.9	467	23.1
Misin07G233600	Miscanthus sinensis	HOM04x5M002570	ORTHO04x5M002687	5.9e-07	58.9	123	34.1
Misin13G182000	Miscanthus sinensis	HOM04x5M002570	ORTHO04x5M002687	5.9e-07	58.9	120	34.2
Potri.003G212500	Populus trichocarpa	HOM04x5M002570	ORTHO04x5M002687	5.9e-07	58.9	201	29.4
LP013034	Lolium perenne	HOM04x5M002570	ORTHO04x5M002687	1.0e-06	58.2	158	30.4
Zosma16g01780	Zostera marina	HOM04x5M002570	ORTHO04x5M002687	1.7e-06	57.4	105	35.2
ATR0605G388	Amborella trichopoda	HOM04x5M002570	ORTHO04x5M002687	3.9e-06	56.2	120	31.7
ATR0605G035	Amborella trichopoda	HOM04x5M002570	ORTHO04x5M002687	5.0e-06	55.8	74	35.1
Spipo0G0079200	Spirodela polyrhiza	HOM04x5M002570	ORTHO04x5M002687	5.0e-06	55.8	169	33.1
Sspon.06G0001740-1A	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	5.0e-06	55.8	120	32.5
Sspon.06G0001740-2D	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	5.0e-06	55.8	120	32.5
Pgl_GLEAN_10009993	Cenchrus americanus	HOM04x5M002570	ORTHO04x5M002687	6.6e-06	55.5	100	37.0
LP030104	Lolium perenne	HOM04x5M002570	ORTHO04x5M002687	6.6e-06	55.5	123	31.7
TRITD7Av1G092980	Triticum turgidum	HOM04x5M002570	ORTHO04x5M002687	8.6e-06	55.1	103	31.1

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