Interactive Phylogenetics Module

Gene Id
Sobic.002G008900

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sobic.002G008900 Sorghum bicolor HOM04x5M003226 ORTHO04x5M004921 0.0e+00 3322.3 1791 100.0
Zm00007a00017366 Zea mays B104 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 3098.9 1779 91.3
Zm00007a00033969 Zea mays B104 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 3033.0 1796 90.3
Zm00008a010545 Zea mays PH207 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2779.2 1730 86.5
Seita.2G002900 Setaria italica HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2761.1 1819 83.0
Pgl_GLEAN_10010211 Cenchrus americanus HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2607.8 1773 81.3
Bradi1g59325 Brachypodium distachyon HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2599.3 1791 78.3
TraesCS2D02G263300 Triticum aestivum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2587.0 1792 77.9
TraesCS2A02G260400 Triticum aestivum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2586.2 1793 77.9
TRITD2Av1G146870 Triticum turgidum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2584.7 1793 77.8
TraesCS2B02G281600 Triticum aestivum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2574.3 1813 76.9
TRITD2Bv1G129320 Triticum turgidum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2573.1 1813 76.8
OsR498G0713385700.01 Oryza sativa ssp. indica HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2563.5 1785 78.6
OB07G10690 Oryza brachyantha HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2540.4 1737 78.9
LP030466 Lolium perenne HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2531.9 1806 75.7
PH01000549G0690 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2513.4 1828 74.2
Sspon.02G0043350-1B Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2466.8 1805 78.5
HORVU2Hr1G064000 Hordeum vulgare HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2439.1 1717 76.2
Zm00001d018657 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2409.4 1429 91.0
Zjn_sc00162.1.g00390.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2293.1 1576 78.9
Zm00008a026675 Zea mays PH207 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2286.1 1433 87.3
Sspon.01G0062950-1D Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2237.6 1363 90.8
Misin04G013100 Miscanthus sinensis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2004.9 1125 95.1
p5.00_sc00151_p0024 Elaeis guineensis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2001.5 1837 60.2
Ma05_g01420 Musa acuminata HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1918.7 1798 58.0
Aco017576 Ananas comosus HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1911.0 1795 59.2
evm.TU.AsparagusV1_03.2056.V1.1 Asparagus officinalis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1860.5 1780 58.1
PH01001526G0360 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1776.1 1362 72.4
PH01001640G0300 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1740.3 1735 60.8
ASH_gene7576 Apostasia shenzhenica HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1725.3 1797 53.4
Potri.017G092600 Populus trichocarpa HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1674.4 1789 53.3
GSVIVG01011514001 Vitis vinifera HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1662.9 1765 53.5
Spipo2G0087800 Spirodela polyrhiza HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1628.2 1734 51.8
PEQU_02399 Phalaenopsis equestris HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1608.2 1511 57.1
Zosma159g00220 Zostera marina HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1603.6 1791 51.1
AT5G15540 Arabidopsis thaliana HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1541.2 1818 49.3
Solyc03g059420.2 Solanum lycopersicum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1520.4 1595 53.5
ATR0064G076 Amborella trichopoda HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1498.4 1546 53.4
Zm00001d007943 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1434.9 792 96.2
CALSI_Maker00013263 Calamus simplicifolius HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1425.6 1281 60.0
LOC_Os07g01940 Oryza sativa ssp. japonica HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1413.3 1017 78.1
Oropetium_20150105_22008 Oropetium thomaeum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1226.5 977 72.0
Mapoly0011s0050 Marchantia polymorpha HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1219.5 1790 42.5
Pp3c15_14600 Physcomitrium patens HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1198.7 1764 41.9
gene23322 Selaginella moellendorffii HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1188.7 1765 41.8
gene10784 Selaginella moellendorffii HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1181.4 1766 41.7
Sspon.02G0025880-2B Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1161.4 659 93.9
Sspon.02G0018920-1A Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1119.0 699 86.8
Misin04G013000 Miscanthus sinensis HOM04x5M003226 ORTHO04x5M004921 3.7e-286 988.0 560 95.9
PAB00017226 Picea abies HOM04x5M003226 ORTHO04x5M004921 1.7e-222 776.5 823 52.7
PAB00016463 Picea abies HOM04x5M003226 ORTHO04x5M004921 3.0e-219 765.8 850 50.1
Misin09G095400 Miscanthus sinensis HOM04x5M003226 ORTHO04x5M004921 5.7e-186 655.2 388 88.9
Sspon.02G0025880-1A Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 1.2e-103 381.7 246 87.8
PAB00065273 Picea abies HOM04x5M003226 ORTHO04x5M004921 1.1e-88 332.0 341 51.3
Potri.004G119100 Populus trichocarpa HOM04x5M003226 ORTHO04x5M004921 2.2e-68 264.6 516 36.6
Zm00001d026188 Zea mays B73 HOM04x5M003226 ORTHO04x5M011996 1.9e-64 251.5 160 81.9
Zm00007a00043263 Zea mays B104 HOM04x5M003226 ORTHO04x5M004921 5.5e-64 250.0 164 80.5
Zm00001d048114 Zea mays B73 HOM04x5M001316 ORTHO04x5M013885 4.1e-59 233.8 193 67.9
Zm00008a035868 Zea mays PH207 HOM04x5M003226 ORTHO04x5M013885 2.9e-57 227.6 159 76.7
Cre06.g278269 Chlamydomonas reinhardtii HOM04x5M003226 ORTHO04x5M004921 5.5e-56 223.4 1368 22.1
Sspon.02G0025880-3C Saccharum spontaneum HOM04x5M003226 ORTHO04x5M014305 9.4e-56 222.6 127 93.7
PH01001526G0340 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 4.4e-53 213.8 241 58.9
MCO01G540 Micromonas commoda HOM04x5M003226 ORTHO04x5M004921 1.1e-48 199.1 392 33.7
Zm00007a00006395 Zea mays B104 HOM04x5M001316 ORTHO04x5M013885 4.4e-45 187.2 132 76.5
Zm00007a00001952 Zea mays B104 HOM04x5M001316 ORTHO04x5M013885 5.3e-43 180.3 132 72.0
Zm00001d037074 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 1.4e-38 165.6 106 84.9
Oropetium_20150105_21970 Oropetium thomaeum HOM04x5M003226 ORTHO04x5M004921 1.2e-37 162.5 101 82.2
Zm00008a033869 Zea mays PH207 HOM04x5M003226 ORTHO04x5M013885 6.3e-28 130.2 86 77.9
Zm00008a017002 Zea mays PH207 HOM04x5M003226 ORTHO04x5M013885 6.3e-28 130.2 86 77.9
Zm00001d018970 Zea mays B73 HOM04x5M001316 ORTHO04x5M013885 9.2e-27 126.3 83 78.3
CALSI_Maker00024933 Calamus simplicifolius HOM04x5M003226 ORTHO04x5M013885 1.8e-22 112.1 168 40.5
Zm00001d035106 Zea mays B73 HOM04x5M003226 ORTHO04x5M011996 1.7e-20 105.5 55 92.7
Zm00008a025706 Zea mays PH207 HOM04x5M003226 ORTHO04x5M013885 6.0e-18 97.1 59 81.4
Zm00001d049603 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 7.8e-18 96.7 113 50.4
p5.00_sc00306_p0013 Elaeis guineensis HOM04x5M003226 ORTHO04x5M024371 3.0e-17 94.7 107 50.5
Zm00001d046771 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 8.6e-17 93.2 67 79.1
Potri.004G119300 Populus trichocarpa HOM04x5M003226 ORTHO04x5M004921 3.1e-14 84.7 91 50.5
CALSI_Maker00013268 Calamus simplicifolius HOM04x5M003226 ORTHO04x5M014305 5.8e-13 80.5 120 40.0
Zm00001d033293 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 5.4e-11 73.9 99 46.5
HORVU2Hr1G033240 Hordeum vulgare HOM04x5M003226 ORTHO04x5M004921 6.0e-10 70.5 50 66.0
Zm00001d030351 Zea mays B73 HOM04x5M013681 ORTHO04x5M019675 7.8e-10 70.1 78 53.8
Aco008507 Ananas comosus HOM04x5M004897 ORTHO04x5M005756 1.0e-09 69.7 39 79.5
CALSI_Maker00024936 Calamus simplicifolius HOM04x5M003226 ORTHO04x5M014305 3.6e-07 61.2 98 38.8
p5.00_sc00306_p0017 Elaeis guineensis HOM04x5M003226 ORTHO04x5M024371 1.8e-06 58.9 69 50.7

Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (1 genes)
Picea abies (3 genes)
Populus trichocarpa (3 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (11 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (6 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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