Interactive Phylogenetics Module

Gene Id
Sobic.001G211500

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sobic.001G211500 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1297.0 716 100.0
Misin01G188300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1275.4 716 91.8
Sspon.01G0020010-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1270.0 716 91.5
Misin02G189500 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1263.4 716 90.9
Sspon.01G0019980-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1262.7 642 99.5
Seita.9G212100 Setaria italica HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1250.3 642 97.7
Zm00008a004117 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1239.6 718 93.7
Pgl_GLEAN_10028670 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1223.0 627 98.1
Zm00007a00014538 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1210.3 695 94.2
TraesCS1D02G172600 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1195.6 642 92.4
TraesCS1B02G184700 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1195.3 642 92.2
TraesCS1A02G172100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1194.5 642 92.4
Bradi3g29530 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1192.6 636 93.2
HORVU1Hr1G044350 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1190.6 642 92.1
Zm00001d032632 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1190.6 718 90.8
Sspon.01G0020010-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1189.5 709 87.4
Sspon.01G0020010-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1184.5 716 86.7
OB10G21140 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1182.2 630 93.5
LOC_Os10g34750 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1181.8 631 93.3
OsR498G1018951400.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1181.8 631 93.3
LP020896 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1175.6 642 90.7
Aco007673 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1123.2 643 87.2
TRITD1Bv1G107980 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1108.6 593 92.6
Ma04_g22700 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1102.8 643 84.9
TRITD1Av1G110770 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 1.3e-306 1055.0 567 92.4
Spipo16G0032600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 3.7e-306 1053.5 640 80.8
ASH_gene2944 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 1.2e-304 1048.5 644 81.5
PEQU_15249 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 3.4e-299 1030.4 641 79.9
Zosma34g01290 Zostera marina HOM04x5M001747 ORTHO04x5M002018 3.3e-294 1013.8 643 77.4
CALSI_Maker00032487 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 1.2e-285 985.3 643 77.1
GSVIVG01031470001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 2.2e-282 974.5 640 75.2
PH01001204G0070 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 2.5e-278 961.1 567 86.2
ATR0329G039 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 1.2e-277 958.7 637 73.8
Solyc11g066370.1 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 8.9e-276 952.6 622 74.1
Potri.009G005900 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 4.4e-275 950.3 624 73.4
AT1G08130 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 6.0e-272 939.9 633 71.4
Mapoly0033s0129 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 1.1e-260 902.5 643 68.6
Pp3c13_20200 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 4.0e-260 900.6 638 68.5
Pp3c13_20209 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 4.0e-260 900.6 638 68.5
gene13434 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 9.9e-259 896.0 635 69.3
gene26512 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 3.8e-258 894.0 635 69.0
evm.TU.AsparagusV1_04.2270.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 6.9e-236 820.1 487 84.0
Sspon.01G0019980-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 4.8e-229 797.3 496 85.5
AT1G49250 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 5.5e-225 783.9 603 64.2
Oropetium_20150105_11084 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 1.2e-208 729.6 642 63.2
MCO11G338 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 1.8e-199 699.1 628 57.5
Cre07.g325716 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 4.7e-184 647.9 642 52.2
PH01000186G0040 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 6.6e-154 547.7 302 92.4
gene13766 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 4.5e-142 508.4 630 42.2
Mapoly0069s0045 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 9.9e-142 507.3 652 41.1
Sspon.01G0019980-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 6.0e-139 498.0 279 90.7
TraesCS3D02G265000 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 1.1e-137 493.8 634 39.7
TraesCS3A02G264800 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 1.9e-137 493.0 637 39.4
TRITD3Av1G176280 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 1.9e-137 493.0 637 39.4
OB01G36030 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 2.5e-137 492.7 637 39.2
Misin06G224100 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 5.6e-137 491.5 660 38.0
HORVU3Hr1G063470 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 1.6e-136 490.0 634 39.4
OsR498G0101784200.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 2.8e-136 489.2 646 38.9
Bradi2g46780 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 4.8e-136 488.4 634 39.6
TraesCS3B02G298100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 6.2e-136 488.0 632 39.4
TRITD3Bv1G156800 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 1.1e-135 487.3 634 39.3
Seita.5G274300 Setaria italica HOM04x5M001747 ORTHO04x5M002018 1.4e-135 486.9 647 38.8
LP029527 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 5.3e-135 485.0 634 39.0
ATR0691G097 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 6.9e-135 484.6 663 40.0
GSVIVG01030942001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 9.0e-135 484.2 637 39.6
AT1G66730 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 5.8e-134 481.5 639 39.4
Solyc02g091120.2 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 6.5e-133 478.0 670 37.5
CALSI_Maker00050199 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 8.4e-133 477.6 674 38.3
ASH_gene7517 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 3.2e-132 475.7 641 39.3
Ma04_g00670 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 2.1e-131 473.0 652 38.7
LOC_Os01g49180 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 1.3e-122 443.7 711 34.7
PEQU_31644 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 1.3e-117 427.2 637 36.4
Sobic.003G260400 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 9.4e-116 421.0 554 38.8
Pgl_GLEAN_10032519 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 1.8e-114 416.8 634 35.5
gene13033 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 2.3e-114 416.4 513 42.7
Zjn_sc00017.1.g06380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 7.2e-108 394.8 642 43.0
Potri.004G094300 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 5.0e-101 372.1 470 40.0
Oropetium_20150105_11565 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 1.1e-100 370.9 648 32.6
MCO09G458 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 1.4e-98 364.0 612 38.1
PH01000704G0390 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 1.7e-85 320.5 475 36.0
Sspon.03G0031770-1B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 2.5e-84 316.6 414 38.9
Cre06.g278177 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 4.9e-64 249.2 1023 23.0
p5.00_sc00008_p0159 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 9.2e-63 245.0 353 36.5
Aco000044 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 4.6e-62 242.7 438 33.1
Zm00001d043835 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 1.5e-60 237.7 405 33.3
Zm00008a014124 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 3.4e-57 226.5 271 39.1
Sspon.03G0031770-2C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 3.9e-53 213.0 403 31.5
PAB00005808 Picea abies HOM04x5M001747 ORTHO04x5M002018 2.8e-51 206.8 210 43.3
evm.TU.AsparagusV1_09.814.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 4.7e-51 206.1 437 28.8
p5.00_sc00008_p0160 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 4.9e-48 196.1 210 44.8
Spipo19G0024700 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 1.2e-46 191.4 264 39.0
ATR0749G104 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 1.6e-46 191.0 109 82.6
ATR0749G050 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 4.3e-44 183.0 128 71.9
PAB00000364 Picea abies HOM04x5M001747 ORTHO04x5M002018 4.3e-44 183.0 116 74.1
Zm00007a00029335 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 5.8e-41 172.6 276 34.4
PAB00001978 Picea abies HOM04x5M001747 ORTHO04x5M002018 1.7e-40 171.0 110 75.5
PAB00036263 Picea abies HOM04x5M001747 ORTHO04x5M002018 9.0e-34 148.7 90 75.6
Spipo19G0024800 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 2.6e-33 147.1 228 36.8
gene15054 Selaginella moellendorffii HOM04x5M004601 ORTHO04x5M005443 4.2e-31 139.8 581 24.8
gene25806 Selaginella moellendorffii HOM04x5M004601 ORTHO04x5M005443 2.1e-30 137.5 581 24.6
Pgl_GLEAN_10020369 Cenchrus americanus HOM04x5M004601 ORTHO04x5M005443 3.5e-30 136.7 401 27.7
PAB00006638 Picea abies HOM04x5M001747 ORTHO04x5M002018 4.6e-30 136.3 176 35.8
TraesCS2A02G431800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 1.0e-29 135.2 618 23.9
TraesCS2D02G429800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 1.3e-29 134.8 620 24.2
Bradi5g20927 Brachypodium distachyon HOM04x5M004601 ORTHO04x5M005443 1.5e-28 131.3 411 26.3
Spipo28G0023000 Spirodela polyrhiza HOM04x5M004601 ORTHO04x5M005443 5.6e-28 129.4 409 26.4
TraesCS2B02G453300 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 5.6e-28 129.4 409 27.1
TRITD2Av1G250540 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 1.3e-27 128.3 411 27.5
TRITD2Bv1G212650 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 1.3e-27 128.3 620 23.7
Ma01_g18780 Musa acuminata HOM04x5M004601 ORTHO04x5M005443 1.6e-27 127.9 380 26.6
PEQU_25681 Phalaenopsis equestris HOM04x5M004601 ORTHO04x5M005443 1.6e-27 127.9 411 27.0
Potri.018G141900 Populus trichocarpa HOM04x5M004601 ORTHO04x5M005443 1.6e-27 127.9 379 26.9
Sobic.006G207300 Sorghum bicolor HOM04x5M004601 ORTHO04x5M005443 2.8e-27 127.1 616 22.4
Zjn_sc00011.1.g00310.1.cf.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 3.6e-27 126.7 151 41.7
ATR0626G236 Amborella trichopoda HOM04x5M004601 ORTHO04x5M005443 6.2e-27 125.9 406 26.6
GSVIVG01029314001 Vitis vinifera HOM04x5M004601 ORTHO04x5M005443 1.4e-26 124.8 381 26.2
Zjn_sc00023.1.g02440.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004601 ORTHO04x5M005443 1.4e-26 124.8 413 26.2
LP005256 Lolium perenne HOM04x5M004601 ORTHO04x5M005443 2.4e-26 124.0 394 27.4
Zm00008a014123 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 2.4e-26 124.0 155 39.4
AT5G57160 Arabidopsis thaliana HOM04x5M004601 ORTHO04x5M005443 4.0e-26 123.2 413 26.2
PAB00058901 Picea abies HOM04x5M001747 ORTHO04x5M002018 4.0e-26 123.2 75 78.7
Seita.7G229000 Setaria italica HOM04x5M004601 ORTHO04x5M005443 4.0e-26 123.2 439 25.3
PH01000224G0720 Phyllostachys edulis HOM04x5M004601 ORTHO04x5M005443 6.9e-26 122.5 403 26.3
Sspon.03G0009130-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 9.0e-26 122.1 151 40.4
Solyc07g017990.2 Solanum lycopersicum HOM04x5M004601 ORTHO04x5M005443 4.5e-25 119.8 337 26.7
Mapoly0001s0137 Marchantia polymorpha HOM04x5M004601 ORTHO04x5M005443 7.6e-25 119.0 402 25.9
Potri.004G094200 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 9.9e-25 118.6 162 38.3
evm.TU.AsparagusV1_01.2163.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 2.9e-24 117.1 108 48.1
Zm00001d002390 Zea mays B73 HOM04x5M004601 ORTHO04x5M005443 3.8e-24 116.7 375 26.1
evm.TU.AsparagusV1_08.2229.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 1.9e-23 114.4 102 48.0
Zm00007a00034356 Zea mays B104 HOM04x5M004601 ORTHO04x5M005443 2.4e-23 114.0 379 26.6
CALSI_Maker00020618 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 1.6e-22 111.3 151 40.4
OsR498G0409240600.01 Oryza sativa ssp. indica HOM04x5M004601 ORTHO04x5M005443 1.1e-20 105.1 484 23.6
Oropetium_20150105_01621 Oropetium thomaeum HOM04x5M004601 ORTHO04x5M005443 1.1e-18 98.6 383 24.3
Zm00008a014122 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 1.4e-18 98.2 120 40.8
Cre10.g433550 Chlamydomonas reinhardtii HOM04x5M004601 ORTHO04x5M005443 4.5e-17 93.2 429 23.1
OB04G31400 Oryza brachyantha HOM04x5M004601 ORTHO04x5M005443 5.8e-17 92.8 228 29.8
Zm00008a006350 Zea mays PH207 HOM04x5M004601 ORTHO04x5M005443 1.4e-15 88.2 394 24.1
evm.TU.AsparagusV1_04.1989.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 2.5e-15 87.4 69 53.6
ATR0749G026 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 1.2e-14 85.1 55 72.7
Zm00007a00052093 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 3.5e-14 83.6 98 36.7
Misin05G212300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 7.9e-14 82.4 98 36.7
CALSI_Maker00003384 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 3.3e-12 77.0 85 43.5
CALSI_Maker00023721 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 4.3e-12 76.6 85 43.5
Sspon.03G0031770-3D Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.3e-11 75.1 257 25.3
Misin05G212200 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 4.8e-11 73.2 197 26.4
Zm00007a00029334 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 8.2e-11 72.4 76 42.1
CALSI_Maker00001347 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 3.1e-10 70.5 79 43.0
Spipo0G0169600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M013120 4.5e-09 66.6 93 37.6

Amborella trichopoda (6 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (5 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (6 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (3 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (2 genes)
Picea abies (6 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (6 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (5 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (3 genes)
Zea mays B73 (3 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (5 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

Program Settings