Interactive Phylogenetics Module

Gene Id
Seita.3G040000

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Seita.3G040000 Setaria italica HOM04x5M005648 ORTHO04x5M006949 0.0e+00 1289.6 799 100.0
Sobic.009G042100 Sorghum bicolor HOM04x5M005648 ORTHO04x5M006949 0.0e+00 1084.3 801 83.4
Misin17G050400 Miscanthus sinensis HOM04x5M005648 ORTHO04x5M006949 0.0e+00 1080.9 810 83.1
Misin16G053500 Miscanthus sinensis HOM04x5M005648 ORTHO04x5M006949 5.4e-306 1052.7 802 81.0
Sspon.07G0013300-2B Saccharum spontaneum HOM04x5M005648 ORTHO04x5M006949 3.3e-303 1043.5 800 77.8
Zjn_sc00025.1.g00280.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005648 ORTHO04x5M006949 8.4e-291 1002.3 840 75.4
OB05G13080 Oryza brachyantha HOM04x5M005648 ORTHO04x5M006949 3.6e-281 970.3 805 72.4
Zm00001d024828 Zea mays B73 HOM04x5M005648 ORTHO04x5M006949 3.3e-279 963.8 805 76.1
Zm00007a00006559 Zea mays B104 HOM04x5M005648 ORTHO04x5M006949 3.3e-279 963.8 805 76.1
TraesCS1A02G109500 Triticum aestivum HOM04x5M005648 ORTHO04x5M006949 3.0e-272 940.6 801 69.5
Zm00008a037488 Zea mays PH207 HOM04x5M005648 ORTHO04x5M006949 1.7e-270 934.9 805 74.8
Sspon.07G0013300-1A Saccharum spontaneum HOM04x5M005648 ORTHO04x5M006949 2.2e-267 924.5 805 74.3
HORVU1Hr1G019650 Hordeum vulgare HOM04x5M005648 ORTHO04x5M006949 6.5e-267 922.9 801 70.4
TraesCS1D02G091200 Triticum aestivum HOM04x5M005648 ORTHO04x5M006949 1.1e-266 922.2 800 69.5
TraesCS1B02G109000 Triticum aestivum HOM04x5M005648 ORTHO04x5M006949 2.4e-253 877.9 800 71.6
TRITD1Bv1G043450 Triticum turgidum HOM04x5M005648 ORTHO04x5M006949 2.4e-253 877.9 800 71.6
Bradi3g49040 Brachypodium distachyon HOM04x5M005648 ORTHO04x5M006949 2.7e-252 874.4 800 68.9
LP011593 Lolium perenne HOM04x5M005648 ORTHO04x5M006949 1.2e-244 849.0 800 69.2
Oropetium_20150105_15522 Oropetium thomaeum HOM04x5M005648 ORTHO04x5M006949 1.7e-243 845.1 799 68.6
p5.00_sc00002_p0274 Elaeis guineensis HOM04x5M005648 ORTHO04x5M006949 8.9e-232 806.2 808 56.6
OsR498G0509732900.01 Oryza sativa ssp. indica HOM04x5M005648 ORTHO04x5M006949 8.6e-227 789.6 473 85.8
evm.TU.AsparagusV1_05.3166.V1.1 Asparagus officinalis HOM04x5M005648 ORTHO04x5M006949 1.6e-225 785.4 729 62.3
Aco008026 Ananas comosus HOM04x5M005648 ORTHO04x5M006949 2.1e-225 785.0 730 58.8
PH01001556G0330 Phyllostachys edulis HOM04x5M005648 ORTHO04x5M006949 5.0e-219 763.8 803 59.7
TRITD1Av1G046480 Triticum turgidum HOM04x5M005648 ORTHO04x5M006949 2.6e-215 751.5 800 58.4
LOC_Os05g05450 Oryza sativa ssp. japonica HOM04x5M005648 ORTHO04x5M006949 8.4e-206 719.9 433 85.7
PEQU_20062 Phalaenopsis equestris HOM04x5M005648 ORTHO04x5M006949 5.4e-205 717.2 734 54.8
ATR0697G033 Amborella trichopoda HOM04x5M005648 ORTHO04x5M006949 1.3e-203 712.6 727 56.3
Pgl_GLEAN_10003488 Cenchrus americanus HOM04x5M005648 ORTHO04x5M006949 8.1e-201 703.4 800 68.5
CALSI_Maker00048885 Calamus simplicifolius HOM04x5M005648 ORTHO04x5M006949 2.6e-199 698.4 779 53.3
Zosma107g00820 Zostera marina HOM04x5M005648 ORTHO04x5M006949 4.9e-198 694.1 741 56.1
Solyc03g097280.2 Solanum lycopersicum HOM04x5M005648 ORTHO04x5M006949 2.4e-197 691.8 517 67.5
GSVIVG01029949001 Vitis vinifera HOM04x5M005648 ORTHO04x5M006949 6.6e-195 683.7 522 66.5
Potri.013G061400 Populus trichocarpa HOM04x5M005648 ORTHO04x5M006949 9.0e-192 673.3 723 61.7
Ma07_g28810 Musa acuminata HOM04x5M005648 ORTHO04x5M006949 3.2e-189 664.8 786 56.0
AT5G17930 Arabidopsis thaliana HOM04x5M005648 ORTHO04x5M006949 1.4e-181 639.4 522 62.3
ASH_gene12914 Apostasia shenzhenica HOM04x5M005648 ORTHO04x5M006949 5.5e-173 610.9 672 57.0
GSVIVG01027853001 Vitis vinifera HOM04x5M005648 ORTHO04x5M006949 8.2e-169 597.0 713 48.0
Mapoly0135s0015 Marchantia polymorpha HOM04x5M005648 ORTHO04x5M006949 1.5e-151 539.7 525 51.6
Pp3c3_21680 Physcomitrium patens HOM04x5M005648 ORTHO04x5M006949 3.4e-151 538.5 754 51.6
gene18578 Selaginella moellendorffii HOM04x5M005648 ORTHO04x5M006949 2.4e-144 515.8 521 53.7
gene22609 Selaginella moellendorffii HOM04x5M005648 ORTHO04x5M006949 1.6e-143 513.1 521 53.7
LP021074 Lolium perenne HOM04x5M005648 ORTHO04x5M006949 4.4e-106 388.7 532 60.7
CALSI_Maker00013565 Calamus simplicifolius HOM04x5M005648 ORTHO04x5M006949 1.7e-86 323.6 287 61.7
Bradi2g36200 Brachypodium distachyon HOM04x5M005648 ORTHO04x5M006949 1.2e-71 274.2 198 71.7
Pp3c3_21687 Physcomitrium patens HOM04x5M005648 ORTHO04x5M006949 9.6e-69 264.6 485 51.8
Cre09.g415200 Chlamydomonas reinhardtii HOM04x5M005648 ORTHO04x5M006949 1.4e-67 260.8 546 32.8
MCO03G302 Micromonas commoda HOM04x5M005648 ORTHO04x5M006949 6.4e-65 251.9 504 34.3
p5.00_sc00170_p0008 Elaeis guineensis HOM04x5M005648 ORTHO04x5M006949 1.2e-63 247.7 157 74.5
Spipo2G0004700 Spirodela polyrhiza HOM04x5M005648 ORTHO04x5M006949 7.2e-48 195.3 368 46.5
Sspon.07G0013300-3D Saccharum spontaneum HOM04x5M005648 ORTHO04x5M006949 2.5e-40 170.2 157 79.6
Bradi2g36205 Brachypodium distachyon HOM04x5M005648 ORTHO04x5M006949 1.2e-31 141.4 95 73.7
PAB00028156 Picea abies HOM04x5M005648 ORTHO04x5M006949 2.1e-23 114.0 285 33.7
gene32718 Selaginella moellendorffii HOM04x5M002359 ORTHO04x5M002763 6.5e-17 92.4 487 22.8
PEQU_15709 Phalaenopsis equestris HOM04x5M002359 ORTHO04x5M002763 5.5e-16 89.4 477 21.4
Sspon.04G0027410-2C Saccharum spontaneum HOM04x5M002359 ORTHO04x5M002763 1.4e-14 84.7 474 21.1
p5.00_sc00086_p0015 Elaeis guineensis HOM04x5M002359 ORTHO04x5M002763 5.2e-14 82.8 491 21.2
HORVU5Hr1G052970 Hordeum vulgare HOM04x5M002359 ORTHO04x5M002763 5.2e-14 82.8 511 20.7
Zosma151g00240 Zostera marina HOM04x5M002359 ORTHO04x5M002763 5.2e-14 82.8 501 21.2
ASH_gene9308 Apostasia shenzhenica HOM04x5M002359 ORTHO04x5M002763 8.8e-14 82.0 489 21.1
LOC_Os12g15420 Oryza sativa ssp. japonica HOM04x5M002359 ORTHO04x5M002763 8.8e-14 82.0 498 20.9
Aco007258 Ananas comosus HOM04x5M002359 ORTHO04x5M002763 1.2e-13 81.6 495 21.2
OsR498G1221220300.01 Oryza sativa ssp. indica HOM04x5M002359 ORTHO04x5M002763 1.2e-13 81.6 496 21.0
Solyc08g005190.2 Solanum lycopersicum HOM04x5M002359 ORTHO04x5M002763 1.5e-13 81.3 497 20.3
Misin07G095300 Miscanthus sinensis HOM04x5M002359 ORTHO04x5M002763 3.4e-13 80.1 494 20.0
Sspon.04G0027410-1B Saccharum spontaneum HOM04x5M002359 ORTHO04x5M002763 3.4e-13 80.1 494 20.2
LP024540 Lolium perenne HOM04x5M002359 ORTHO04x5M002763 4.4e-13 79.7 490 20.6
Ma01_g22650 Musa acuminata HOM04x5M002359 ORTHO04x5M002763 4.4e-13 79.7 490 20.4
gene9401 Selaginella moellendorffii HOM04x5M002359 ORTHO04x5M002763 4.4e-13 79.7 505 21.8
gene17511 Selaginella moellendorffii HOM04x5M002359 ORTHO04x5M002763 4.4e-13 79.7 505 21.8
Pgl_GLEAN_10014088 Cenchrus americanus HOM04x5M002359 ORTHO04x5M002763 5.7e-13 79.3 497 20.1
LP031524 Lolium perenne HOM04x5M002359 ORTHO04x5M002763 5.7e-13 79.3 495 20.6
OB12G16800 Oryza brachyantha HOM04x5M002359 ORTHO04x5M002763 5.7e-13 79.3 496 20.4
Bradi4g39400 Brachypodium distachyon HOM04x5M002359 ORTHO04x5M002763 7.5e-13 79.0 493 20.5
evm.TU.AsparagusV1_Unassigned.177.V1.1 Asparagus officinalis HOM04x5M002359 ORTHO04x5M002763 1.7e-12 77.8 492 20.9
Sobic.003G241200 Sorghum bicolor HOM04x5M002359 ORTHO04x5M002763 1.7e-12 77.8 496 20.6
Solyc04g079920.2 Solanum lycopersicum HOM04x5M002359 ORTHO04x5M002763 2.8e-12 77.0 465 19.8
Seita.3G085100 Setaria italica HOM04x5M002359 ORTHO04x5M002763 3.7e-12 76.6 496 20.4
AT1G80930 Arabidopsis thaliana HOM04x5M002359 ORTHO04x5M002763 4.8e-12 76.3 502 19.7
HORVU3Hr1G096820 Hordeum vulgare HOM04x5M002359 ORTHO04x5M002763 4.8e-12 76.3 492 19.9
TraesCS3B02G481400 Triticum aestivum HOM04x5M002359 ORTHO04x5M002763 4.8e-12 76.3 492 19.9
TraesCS3D02G438900 Triticum aestivum HOM04x5M002359 ORTHO04x5M002763 4.8e-12 76.3 492 19.9
TRITD3Bv1G243930 Triticum turgidum HOM04x5M002359 ORTHO04x5M002763 4.8e-12 76.3 492 19.9
Bradi3g33885 Brachypodium distachyon HOM04x5M002359 ORTHO04x5M002763 6.3e-12 75.9 462 22.5
Pp3c24_6660 Physcomitrium patens HOM04x5M002359 ORTHO04x5M002763 6.3e-12 75.9 511 20.4
Spipo6G0042300 Spirodela polyrhiza HOM04x5M002359 ORTHO04x5M002763 8.3e-12 75.5 460 20.0
TraesCS3A02G446300 Triticum aestivum HOM04x5M002359 ORTHO04x5M002763 8.3e-12 75.5 492 20.1
TRITD3Av1G251400 Triticum turgidum HOM04x5M002359 ORTHO04x5M002763 8.3e-12 75.5 492 20.1
LP006693 Lolium perenne HOM04x5M002359 ORTHO04x5M002763 1.8e-11 74.3 492 19.9
Mapoly0072s0074 Marchantia polymorpha HOM04x5M002359 ORTHO04x5M002763 2.4e-11 73.9 504 20.8
CALSI_Maker00011022 Calamus simplicifolius HOM04x5M002359 ORTHO04x5M002763 3.1e-11 73.6 138 29.0
Cre06.g259800 Chlamydomonas reinhardtii HOM04x5M002359 ORTHO04x5M002763 7.0e-11 72.4 138 26.8
Zm00008a036731 Zea mays PH207 HOM04x5M002359 ORTHO04x5M002763 7.0e-11 72.4 473 21.4
MCO02G440 Micromonas commoda HOM04x5M002359 ORTHO04x5M002763 1.6e-10 71.2 489 20.2
LOC_Os11g05394 Oryza sativa ssp. japonica HOM04x5M002359 ORTHO04x5M002763 1.6e-10 71.2 138 28.3
Potri.016G121100 Populus trichocarpa HOM04x5M002359 ORTHO04x5M002763 2.7e-10 70.5 490 19.8
Zm00007a00009396 Zea mays B104 HOM04x5M002359 ORTHO04x5M002763 2.7e-10 70.5 138 27.5
Misin08G077300 Miscanthus sinensis HOM04x5M002359 ORTHO04x5M002763 3.5e-10 70.1 138 27.5
p5.00_sc00170_p0009 Elaeis guineensis HOM04x5M005648 ORTHO04x5M006949 4.5e-10 69.7 78 59.0
Zjn_sc00001.1.g00710.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004077 ORTHO04x5M004678 4.5e-10 69.7 88 52.3
Solyc03g122110.1 Solanum lycopersicum HOM04x5M002359 ORTHO04x5M002763 2.9e-09 67.0 467 19.9
Solyc03g116050.1 Solanum lycopersicum HOM04x5M002359 ORTHO04x5M002763 1.9e-08 64.3 459 18.7
Oropetium_20150105_24843 Oropetium thomaeum HOM04x5M002359 ORTHO04x5M002763 8.9e-06 55.5 117 25.6

Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (5 genes)
Calamus simplicifolius (3 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (2 genes)
Elaeis guineensis (4 genes)
Hordeum vulgare (3 genes)
Lolium perenne (5 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (3 genes)
Picea abies (1 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (5 genes)
Setaria italica (2 genes)
Solanum lycopersicum (5 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (6 genes)
Triticum turgidum (4 genes)
Vitis vinifera (2 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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