Interactive Phylogenetics Module

Gene Id
Pp3c8_8190

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_8190 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1554.3 837 100.0
Pp3c24_4920 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1450.6 838 92.8
Mapoly0030s0152 Marchantia polymorpha HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1167.1 837 75.5
gene23001 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 6.8e-291 1002.7 837 65.8
gene24646 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 6.8e-291 1002.7 837 65.8
ATR1098G037 Amborella trichopoda HOM04x5M004483 ORTHO04x5M005884 7.0e-288 992.6 838 63.2
Solyc04g049490.2 Solanum lycopersicum HOM04x5M004483 ORTHO04x5M005884 1.2e-282 975.3 828 61.8
GSVIVG01016094001 Vitis vinifera HOM04x5M004483 ORTHO04x5M005884 1.8e-280 968.0 740 67.2
p5.00_sc00079_p0034 Elaeis guineensis HOM04x5M004483 ORTHO04x5M005884 3.8e-278 960.3 843 61.1
Ma09_g26670 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 2.5e-277 957.6 842 60.9
Oropetium_20150105_13133 Oropetium thomaeum HOM04x5M004483 ORTHO04x5M005884 1.6e-276 954.9 838 60.3
Aco018477 Ananas comosus HOM04x5M004483 ORTHO04x5M005884 2.3e-275 951.0 847 60.6
evm.TU.AsparagusV1_07.3477.V1.1 Asparagus officinalis HOM04x5M004483 ORTHO04x5M005884 4.0e-275 950.3 844 60.3
CALSI_Maker00040564 Calamus simplicifolius HOM04x5M004483 ORTHO04x5M005884 8.9e-275 949.1 843 61.0
Bradi2g58070 Brachypodium distachyon HOM04x5M004483 ORTHO04x5M005884 2.9e-273 944.1 838 60.0
Potri.016G023000 Populus trichocarpa HOM04x5M004483 ORTHO04x5M005884 4.6e-271 936.8 827 60.6
Misin06G412700 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 6.0e-271 936.4 845 59.2
Spipo16G0007900 Spirodela polyrhiza HOM04x5M004483 ORTHO04x5M005884 3.0e-270 934.1 756 63.8
ASH_gene16649 Apostasia shenzhenica HOM04x5M004483 ORTHO04x5M005884 5.0e-270 933.3 845 59.6
Misin06G362600 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 1.5e-269 931.8 843 59.0
Ma06_g32990 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 4.3e-269 930.2 839 59.7
OB01G49770 Oryza brachyantha HOM04x5M004483 ORTHO04x5M005884 4.3e-269 930.2 840 59.0
Zosma30g00970 Zostera marina HOM04x5M004483 ORTHO04x5M005884 7.3e-269 929.5 845 59.4
AT1G50500 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 3.4e-266 920.6 832 58.3
TraesCS3B02G422700 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 9.8e-266 919.1 843 58.2
Seita.5G420100 Setaria italica HOM04x5M004483 ORTHO04x5M005884 1.7e-265 918.3 843 58.5
LP034954 Lolium perenne HOM04x5M004483 ORTHO04x5M005884 2.9e-265 917.5 843 57.8
Sobic.003G394200 Sorghum bicolor HOM04x5M004483 ORTHO04x5M005884 6.4e-265 916.4 843 58.5
HORVU3Hr1G088490 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 1.1e-264 915.6 844 57.8
TraesCS3D02G383500 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 1.4e-264 915.2 843 58.4
Zm00008a013008 Zea mays PH207 HOM04x5M004483 ORTHO04x5M005884 1.4e-264 915.2 849 58.3
TraesCS3A02G390900 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 9.2e-264 912.5 843 57.9
TRITD3Av1G230670 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 9.2e-264 912.5 843 57.9
HORVU3Hr1G088450 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 2.7e-263 911.0 842 57.8
Zm00001d042451 Zea mays B73 HOM04x5M004483 ORTHO04x5M005884 3.5e-263 910.6 859 57.6
OsR498G0102540800.01 Oryza sativa ssp. indica HOM04x5M004483 ORTHO04x5M005884 1.9e-261 904.8 827 59.5
TRITD3Bv1G217030 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 1.5e-258 895.2 834 57.4
Sspon.03G0000770-1A Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 5.8e-258 893.3 843 57.3
Sspon.03G0000770-4D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 8.6e-254 879.4 843 56.7
Sspon.03G0045090-1D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 4.9e-249 863.6 880 54.4
Pgl_GLEAN_10010470 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 1.6e-239 832.0 863 54.1
PH01000031G1260 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 4.9e-225 783.9 867 52.5
Zm00007a00032775 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 1.2e-218 762.7 716 57.0
Sspon.03G0000770-3C Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 1.1e-192 676.4 650 55.5
Sspon.03G0000770-2B Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 1.5e-168 596.3 843 43.9
MCO12G450 Micromonas commoda HOM04x5M004483 ORTHO04x5M005884 1.7e-153 546.2 773 42.6
PH01000229G0300 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 1.2e-141 506.9 650 48.0
Zjn_sc00034.1.g03870.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 9.6e-120 434.1 827 37.7
LOC_Os01g67880 Oryza sativa ssp. japonica HOM04x5M004483 ORTHO04x5M005884 2.7e-114 416.0 406 55.7
PEQU_14398 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 1.9e-107 393.3 413 52.1
Cre06.g259600 Chlamydomonas reinhardtii HOM04x5M004483 ORTHO04x5M005884 5.5e-107 391.7 812 32.6
PEQU_01746 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 2.9e-92 342.8 267 65.5
AT1G50970 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 1.7e-68 263.8 386 41.2
Misin11G134900 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 6.1e-66 255.4 180 73.9
Zjn_sc00009.1.g03380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 4.7e-58 229.2 299 46.2
PAB00008915 Picea abies HOM04x5M004483 ORTHO04x5M005884 7.5e-48 195.3 120 81.7
Zm00007a00040839 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 7.3e-35 152.1 115 68.7
PEQU_14397 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M021890 4.7e-26 122.9 135 53.3
PAB00038035 Picea abies HOM04x5M004483 ORTHO04x5M021890 8.4e-23 112.1 152 47.4
PAB00059840 Picea abies HOM04x5M004483 ORTHO04x5M005884 9.6e-11 72.0 142 35.9
Pgl_GLEAN_10023950 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 4.9e-07 59.7 46 56.5

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings