Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Pp3c5_9920	Physcomitrium patens	HOM04x5M003355	ORTHO04x5M178023	1.5e-39	164.5	86	100.0
Pp3c23_15810	Physcomitrium patens	HOM04x5M003355	ORTHO04x5M004677	1.6e-17	91.3	79	73.4
Pp3c24_18820	Physcomitrium patens	HOM04x5M003355	ORTHO04x5M004677	4.0e-13	76.6	82	54.9
gene13859	Selaginella moellendorffii	HOM04x5M003355	ORTHO04x5M004677	1.4e-10	68.2	79	53.2
gene30760	Selaginella moellendorffii	HOM04x5M003355	ORTHO04x5M004677	1.4e-10	68.2	79	53.2
Pp3c3_2590	Physcomitrium patens	HOM04x5M003355	ORTHO04x5M181827	5.4e-10	66.2	86	52.3
evm.TU.AsparagusV1_Unassigned.219.V1.1	Asparagus officinalis	HOM04x5M003355	ORTHO04x5M004677	9.2e-10	65.5	81	45.7
Mapoly0091s0082	Marchantia polymorpha	HOM04x5M003355	ORTHO04x5M004677	1.2e-09	65.1	79	50.6
ATR0680G162	Amborella trichopoda	HOM04x5M003355	ORTHO04x5M004677	7.8e-09	62.4	81	46.9
PAB00064689	Picea abies	HOM04x5M003355	ORTHO04x5M004677	1.3e-08	61.6	81	48.1
Solyc08g081170.2	Solanum lycopersicum	HOM04x5M003355	ORTHO04x5M004677	1.7e-08	61.2	80	43.8
p5.00_sc00097_p0008	Elaeis guineensis	HOM04x5M003355	ORTHO04x5M004677	3.0e-08	60.5	81	44.4
AT1G63680	Arabidopsis thaliana	HOM04x5M003355	ORTHO04x5M004677	8.6e-08	58.9	79	41.8
CALSI_Maker00009677	Calamus simplicifolius	HOM04x5M003355	ORTHO04x5M004677	8.6e-08	58.9	80	42.5
CALSI_Maker00016688	Calamus simplicifolius	HOM04x5M003355	ORTHO04x5M004677	8.6e-08	58.9	80	42.5
PEQU_22706	Phalaenopsis equestris	HOM04x5M003355	ORTHO04x5M004677	1.5e-07	58.2	81	40.7
p5.00_sc00197_p0046	Elaeis guineensis	HOM04x5M003355	ORTHO04x5M004677	1.9e-07	57.8	81	40.7
ASH_gene14768	Apostasia shenzhenica	HOM04x5M003355	ORTHO04x5M004677	2.5e-07	57.4	81	46.9
Potri.001G103300	Populus trichocarpa	HOM04x5M003355	ORTHO04x5M004677	2.5e-07	57.4	80	43.8
Spipo1G0029900	Spirodela polyrhiza	HOM04x5M003355	ORTHO04x5M004677	5.6e-07	56.2	80	43.8
Aco010253	Ananas comosus	HOM04x5M003355	ORTHO04x5M004677	7.3e-07	55.8	81	45.7
evm.TU.AsparagusV1_Unassigned.218.V1.1	Asparagus officinalis	HOM04x5M003355	ORTHO04x5M004677	7.3e-07	55.8	81	43.2
Ma05_g12140	Musa acuminata	HOM04x5M003355	ORTHO04x5M004677	1.2e-06	55.1	81	42.0
Zosma16g00460	Zostera marina	HOM04x5M003355	ORTHO04x5M004677	2.8e-06	53.9	80	43.8
evm.TU.AsparagusV1_07.2214.V1.1	Asparagus officinalis	HOM04x5M003355	ORTHO04x5M004677	3.6e-06	53.5	71	39.4
PEQU_17496	Phalaenopsis equestris	HOM04x5M003355	ORTHO04x5M004677	4.7e-06	53.1	37	62.2
Aco011760	Ananas comosus	HOM04x5M003355	ORTHO04x5M004677	6.2e-06	52.8	81	39.5
ASH_gene11961	Apostasia shenzhenica	HOM04x5M003355	ORTHO04x5M004677	6.2e-06	52.8	80	45.0
CALSI_Maker00021578	Calamus simplicifolius	HOM04x5M003355	ORTHO04x5M004677	6.2e-06	52.8	81	40.7

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment