Interactive Phylogenetics Module

Gene Id
Pp3c24_4920

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c24_4920 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1571.2 835 100.0
Pp3c8_8190 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1456.4 838 92.8
Mapoly0030s0152 Marchantia polymorpha HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1177.5 829 76.0
gene23001 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 1.5e-290 1001.5 831 66.1
gene24646 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 1.5e-290 1001.5 831 66.1
ATR1098G037 Amborella trichopoda HOM04x5M004483 ORTHO04x5M005884 7.2e-285 982.6 832 63.2
Solyc04g049490.2 Solanum lycopersicum HOM04x5M004483 ORTHO04x5M005884 6.6e-278 959.5 828 61.2
GSVIVG01016094001 Vitis vinifera HOM04x5M004483 ORTHO04x5M005884 6.6e-278 959.5 747 66.0
p5.00_sc00079_p0034 Elaeis guineensis HOM04x5M004483 ORTHO04x5M005884 8.0e-276 952.6 852 59.7
Ma09_g26670 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 3.0e-275 950.7 852 59.7
CALSI_Maker00040564 Calamus simplicifolius HOM04x5M004483 ORTHO04x5M005884 4.4e-274 946.8 856 59.5
Oropetium_20150105_13133 Oropetium thomaeum HOM04x5M004483 ORTHO04x5M005884 3.7e-273 943.7 840 59.3
Aco018477 Ananas comosus HOM04x5M004483 ORTHO04x5M005884 7.0e-272 939.5 857 58.8
Bradi2g58070 Brachypodium distachyon HOM04x5M004483 ORTHO04x5M005884 9.2e-272 939.1 838 59.5
evm.TU.AsparagusV1_07.3477.V1.1 Asparagus officinalis HOM04x5M004483 ORTHO04x5M005884 2.7e-271 937.6 843 59.2
Misin06G412700 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 2.9e-270 934.1 847 58.7
ASH_gene16649 Apostasia shenzhenica HOM04x5M004483 ORTHO04x5M005884 4.3e-269 930.2 855 58.1
Zosma30g00970 Zostera marina HOM04x5M004483 ORTHO04x5M005884 2.1e-268 927.9 845 58.6
Potri.016G023000 Populus trichocarpa HOM04x5M004483 ORTHO04x5M005884 3.6e-268 927.2 826 59.9
Ma06_g32990 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 8.0e-268 926.0 743 64.3
Misin06G362600 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 8.0e-268 926.0 842 58.0
OB01G49770 Oryza brachyantha HOM04x5M004483 ORTHO04x5M005884 1.2e-266 922.2 845 58.5
AT1G50500 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 1.7e-265 918.3 833 58.0
Spipo16G0007900 Spirodela polyrhiza HOM04x5M004483 ORTHO04x5M005884 2.9e-265 917.5 758 62.8
Zm00008a013008 Zea mays PH207 HOM04x5M004483 ORTHO04x5M005884 1.1e-264 915.6 850 57.5
Seita.5G420100 Setaria italica HOM04x5M004483 ORTHO04x5M005884 3.2e-264 914.1 843 57.5
TraesCS3B02G422700 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 9.2e-264 912.5 847 57.7
Zm00001d042451 Zea mays B73 HOM04x5M004483 ORTHO04x5M005884 2.7e-263 911.0 860 56.9
Sobic.003G394200 Sorghum bicolor HOM04x5M004483 ORTHO04x5M005884 3.5e-263 910.6 844 57.5
LP034954 Lolium perenne HOM04x5M004483 ORTHO04x5M005884 4.6e-263 910.2 843 57.2
TraesCS3D02G383500 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 3.0e-262 907.5 852 57.4
HORVU3Hr1G088450 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 3.9e-262 907.1 842 57.6
HORVU3Hr1G088490 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 5.0e-262 906.7 847 57.4
TraesCS3A02G390900 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 8.6e-262 906.0 847 57.4
TRITD3Av1G230670 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 8.6e-262 906.0 847 57.4
OsR498G0102540800.01 Oryza sativa ssp. indica HOM04x5M004483 ORTHO04x5M005884 6.2e-260 899.8 826 58.5
TRITD3Bv1G217030 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 2.2e-257 891.3 835 57.0
Sspon.03G0000770-1A Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 7.0e-256 886.3 842 56.3
Sspon.03G0000770-4D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 1.2e-252 875.5 844 55.8
Sspon.03G0045090-1D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 1.9e-248 861.7 879 53.6
Pgl_GLEAN_10010470 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 9.6e-237 822.8 865 52.9
PH01000031G1260 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 3.5e-223 777.7 875 51.7
Zm00007a00032775 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 1.1e-219 766.1 717 56.2
Sspon.03G0000770-3C Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 2.5e-192 675.2 649 54.5
Sspon.03G0000770-2B Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 7.7e-170 600.5 842 43.1
MCO12G450 Micromonas commoda HOM04x5M004483 ORTHO04x5M005884 5.9e-154 547.7 773 42.3
PH01000229G0300 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 4.6e-138 495.0 650 47.2
Zjn_sc00034.1.g03870.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 1.3e-121 440.3 822 37.7
LOC_Os01g67880 Oryza sativa ssp. japonica HOM04x5M004483 ORTHO04x5M005884 4.9e-116 421.8 404 54.2
PEQU_14398 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 1.5e-109 400.2 413 51.3
Cre06.g259600 Chlamydomonas reinhardtii HOM04x5M004483 ORTHO04x5M005884 4.5e-109 398.7 812 32.9
PEQU_01746 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 1.8e-89 333.6 267 64.8
AT1G50970 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 1.0e-65 254.6 387 39.8
Misin11G134900 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 4.0e-65 252.7 180 73.3
Zjn_sc00009.1.g03380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 3.0e-57 226.5 294 44.9
PAB00008915 Picea abies HOM04x5M004483 ORTHO04x5M005884 3.5e-45 186.4 120 78.3
Zm00007a00040839 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 8.0e-34 148.7 115 67.8
PEQU_14397 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M021890 7.3e-27 125.6 137 54.0
PAB00038035 Picea abies HOM04x5M004483 ORTHO04x5M021890 6.0e-21 105.9 155 47.1
PAB00059840 Picea abies HOM04x5M004483 ORTHO04x5M005884 1.0e-12 78.6 142 34.5
Pgl_GLEAN_10023950 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 5.4e-06 56.2 46 52.2

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings