Interactive Phylogenetics Module

Gene Id
Pp3c13_20209

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_20200 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1427.9 777 100.0
Pp3c13_20209 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1427.9 777 100.0
Mapoly0033s0129 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 1.7e-272 941.4 638 73.5
gene13434 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 8.0e-270 932.6 629 73.4
Ma04_g22700 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 1.2e-268 928.7 638 71.0
gene26512 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 1.5e-268 928.3 629 73.1
ATR0329G039 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 8.5e-264 912.5 712 66.2
Aco007673 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 1.1e-263 912.1 640 69.8
Sspon.01G0019980-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 8.8e-261 902.5 638 68.7
Bradi3g29530 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 3.4e-260 900.6 638 68.7
Sobic.001G211500 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 1.3e-259 898.7 638 68.5
Sspon.01G0020010-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.3e-259 898.7 638 68.5
TraesCS1D02G172600 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 3.7e-259 897.1 665 66.5
Misin01G188300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 4.9e-259 896.7 638 68.3
TraesCS1B02G184700 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 4.9e-259 896.7 665 66.3
TraesCS1A02G172100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 8.3e-259 896.0 665 66.5
Seita.9G212100 Setaria italica HOM04x5M001747 ORTHO04x5M002018 1.1e-258 895.6 638 68.0
Misin02G189500 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 2.0e-257 891.3 638 68.0
LP020896 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 5.9e-257 889.8 638 67.9
HORVU1Hr1G044350 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 3.8e-256 887.1 678 64.9
Pgl_GLEAN_10028670 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 6.6e-256 886.3 627 68.6
PEQU_15249 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 1.5e-255 885.2 639 68.5
Spipo16G0032600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 7.3e-255 882.9 638 67.7
Zm00008a004117 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 9.5e-255 882.5 638 67.4
LOC_Os10g34750 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 1.2e-254 882.1 628 68.5
OsR498G1018951400.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 1.2e-254 882.1 628 68.5
OB10G21140 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 2.1e-254 881.3 627 68.4
ASH_gene2944 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 1.4e-253 878.6 698 63.6
Zosma34g01290 Zostera marina HOM04x5M001747 ORTHO04x5M002018 2.9e-251 870.9 640 67.3
Potri.009G005900 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 8.3e-251 869.4 682 63.2
Zm00007a00014538 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 1.1e-250 869.0 616 68.3
Solyc11g066370.1 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 2.0e-249 864.8 623 68.7
GSVIVG01031470001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 1.9e-247 858.2 639 66.2
AT1G08130 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 6.8e-245 849.7 632 64.6
Zm00001d032632 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 5.8e-244 846.7 638 65.4
Sspon.01G0020010-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 8.3e-243 842.8 631 66.1
CALSI_Maker00032487 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 5.0e-240 833.6 638 64.6
Sspon.01G0020010-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 4.7e-238 827.0 638 64.6
TRITD1Bv1G107980 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 1.4e-237 825.5 617 66.0
TRITD1Av1G110770 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 2.5e-223 778.1 591 65.1
PH01001204G0070 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 6.4e-203 710.3 564 62.1
AT1G49250 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 7.4e-199 696.8 603 57.9
evm.TU.AsparagusV1_04.2270.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 4.0e-197 691.0 487 69.6
MCO11G338 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 6.9e-197 690.3 637 56.2
Cre07.g325716 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 8.2e-182 640.2 713 49.5
Sspon.01G0019980-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 5.2e-152 541.2 418 64.4
Oropetium_20150105_11084 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 6.8e-144 514.2 638 46.4
Mapoly0069s0045 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 2.6e-135 485.7 641 40.4
gene13766 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 1.8e-133 479.6 634 42.0
OsR498G0101784200.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 8.6e-131 470.7 690 37.1
LP029527 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 9.5e-130 467.2 647 38.6
OB01G36030 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 1.2e-129 466.8 647 38.3
HORVU3Hr1G063470 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 2.8e-129 465.7 635 38.7
TraesCS3B02G298100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 2.8e-129 465.7 633 38.7
Bradi2g46780 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 3.6e-129 465.3 635 38.9
TraesCS3A02G264800 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 3.6e-129 465.3 637 38.6
TRITD3Av1G176280 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 3.6e-129 465.3 637 38.6
TraesCS3D02G265000 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 6.2e-129 464.5 635 38.6
TRITD3Bv1G156800 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 6.2e-129 464.5 635 38.6
GSVIVG01030942001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 8.0e-129 464.2 637 39.2
Misin06G224100 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 3.1e-128 462.2 635 38.6
AT1G66730 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 2.6e-127 459.1 639 39.1
ATR0691G097 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 1.3e-126 456.8 646 39.3
Solyc02g091120.2 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 2.2e-126 456.1 668 37.4
Seita.5G274300 Setaria italica HOM04x5M001747 ORTHO04x5M002018 3.2e-125 452.2 635 38.0
CALSI_Maker00050199 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 1.2e-124 450.3 653 38.7
ASH_gene7517 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 3.0e-123 445.7 638 38.6
Ma04_g00670 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 3.0e-123 445.7 638 39.5
LOC_Os01g49180 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 7.1e-117 424.5 755 33.4
PEQU_31644 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 2.6e-111 406.0 637 36.4
Sobic.003G260400 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 6.6e-107 391.3 541 38.8
Pgl_GLEAN_10032519 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 3.3e-106 389.0 635 34.8
PH01000186G0040 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 4.3e-106 388.7 303 65.0
gene13033 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 2.4e-104 382.9 518 41.7
Sspon.01G0019980-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 3.2e-101 372.5 279 65.2
Potri.004G094300 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 1.9e-98 363.2 473 40.2
Oropetium_20150105_11565 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 1.1e-96 357.5 565 35.6
MCO09G458 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 4.2e-85 318.9 619 35.5
PH01000704G0390 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 1.8e-80 303.5 476 35.7
Sspon.03G0031770-1B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 2.6e-79 299.7 399 39.1
Zjn_sc00017.1.g06380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 2.3e-67 260.0 638 32.0
Cre06.g278177 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 3.4e-63 246.1 1038 23.9
Aco000044 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 1.1e-56 224.6 425 33.2
p5.00_sc00008_p0159 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 5.3e-56 222.2 343 37.0
Zm00001d043835 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 9.1e-56 221.5 390 33.1
Zm00008a014124 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 3.4e-55 219.5 260 40.4
evm.TU.AsparagusV1_09.814.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 4.4e-50 202.6 438 30.1
Sspon.03G0031770-2C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 7.0e-48 195.3 398 32.2
p5.00_sc00008_p0160 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 5.9e-47 192.2 215 45.1
ATR0749G050 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 1.0e-46 191.4 128 68.8
PAB00005808 Picea abies HOM04x5M001747 ORTHO04x5M002018 1.3e-46 191.0 198 44.4
PAB00000364 Picea abies HOM04x5M001747 ORTHO04x5M002018 6.5e-46 188.7 116 77.6
Spipo19G0024700 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 3.0e-43 179.9 279 37.3
PAB00001978 Picea abies HOM04x5M001747 ORTHO04x5M002018 7.5e-42 175.3 167 56.9
ATR0749G104 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 1.4e-40 171.0 105 76.2
PAB00036263 Picea abies HOM04x5M001747 ORTHO04x5M002018 7.2e-37 158.7 88 80.7
Zm00007a00029335 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 1.6e-36 157.5 246 34.1
Pgl_GLEAN_10020369 Cenchrus americanus HOM04x5M004601 ORTHO04x5M005443 3.0e-35 153.3 577 25.8
TraesCS2A02G431800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 4.0e-35 152.9 600 25.3
TraesCS2D02G429800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 2.0e-34 150.6 602 25.6
gene15054 Selaginella moellendorffii HOM04x5M004601 ORTHO04x5M005443 3.4e-34 149.8 553 26.0
Pp3c14_5920 Physcomitrium patens HOM04x5M004601 ORTHO04x5M005443 5.7e-34 149.1 509 25.7
Spipo19G0024800 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 1.7e-33 147.5 228 37.3
TRITD2Bv1G212650 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 2.2e-33 147.1 602 25.4
gene25806 Selaginella moellendorffii HOM04x5M004601 ORTHO04x5M005443 1.4e-32 144.4 538 25.7
Bradi5g20927 Brachypodium distachyon HOM04x5M004601 ORTHO04x5M005443 1.8e-32 144.1 600 24.7
TraesCS2B02G453300 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 2.4e-32 143.7 539 25.2
Sobic.006G207300 Sorghum bicolor HOM04x5M004601 ORTHO04x5M005443 4.1e-32 142.9 585 24.1
Seita.7G229000 Setaria italica HOM04x5M004601 ORTHO04x5M005443 5.4e-32 142.5 614 24.8
TRITD2Av1G250540 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 1.2e-31 141.4 566 25.1
LP005256 Lolium perenne HOM04x5M004601 ORTHO04x5M005443 7.7e-31 138.7 578 25.6
Potri.018G141900 Populus trichocarpa HOM04x5M004601 ORTHO04x5M005443 2.9e-30 136.7 621 24.6
Spipo28G0023000 Spirodela polyrhiza HOM04x5M004601 ORTHO04x5M005443 2.9e-30 136.7 558 24.4
AT5G57160 Arabidopsis thaliana HOM04x5M004601 ORTHO04x5M005443 6.6e-30 135.6 559 24.5
evm.TU.AsparagusV1_01.47.V1.1 Asparagus officinalis HOM04x5M004601 ORTHO04x5M005443 1.5e-29 134.4 542 23.6
PEQU_25681 Phalaenopsis equestris HOM04x5M004601 ORTHO04x5M005443 1.5e-29 134.4 506 23.7
Ma01_g18780 Musa acuminata HOM04x5M004601 ORTHO04x5M005443 9.5e-29 131.7 557 23.9
GSVIVG01029314001 Vitis vinifera HOM04x5M004601 ORTHO04x5M005443 9.5e-29 131.7 561 24.6
ATR0626G236 Amborella trichopoda HOM04x5M004601 ORTHO04x5M005443 1.2e-28 131.3 556 24.5
Zm00001d002390 Zea mays B73 HOM04x5M004601 ORTHO04x5M005443 1.6e-28 131.0 591 23.7
Zjn_sc00023.1.g02440.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004601 ORTHO04x5M005443 4.7e-28 129.4 451 26.4
Mapoly0001s0137 Marchantia polymorpha HOM04x5M004601 ORTHO04x5M005443 6.1e-28 129.0 649 23.3
Zm00007a00034356 Zea mays B104 HOM04x5M004601 ORTHO04x5M005443 1.8e-27 127.5 569 24.4
PH01000224G0720 Phyllostachys edulis HOM04x5M004601 ORTHO04x5M005443 5.2e-27 125.9 613 23.7
Zosma58g00340 Zostera marina HOM04x5M004601 ORTHO04x5M005443 6.8e-27 125.6 544 23.5
Solyc07g017990.2 Solanum lycopersicum HOM04x5M004601 ORTHO04x5M005443 2.6e-26 123.6 466 23.8
PAB00058901 Picea abies HOM04x5M001747 ORTHO04x5M002018 5.7e-26 122.5 74 82.4
PAB00006638 Picea abies HOM04x5M001747 ORTHO04x5M002018 1.7e-25 120.9 175 33.7
evm.TU.AsparagusV1_01.2163.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 6.3e-25 119.0 108 50.0
evm.TU.AsparagusV1_08.2229.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 3.1e-24 116.7 121 46.3
Zm00008a014123 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 5.9e-23 112.5 140 38.6
p5.00_sc00005_p0252 Elaeis guineensis HOM04x5M004601 ORTHO04x5M005443 3.8e-22 109.8 596 23.3
Zjn_sc00011.1.g00310.1.cf.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 5.0e-22 109.4 139 37.4
Sspon.03G0009130-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.5e-21 107.8 137 38.7
Oropetium_20150105_01621 Oropetium thomaeum HOM04x5M004601 ORTHO04x5M005443 9.5e-21 105.1 452 23.2
Potri.004G094200 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 9.5e-21 105.1 149 34.9
Cre10.g433550 Chlamydomonas reinhardtii HOM04x5M004601 ORTHO04x5M005443 1.0e-19 101.7 501 25.1
CALSI_Maker00020618 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 1.2e-18 98.2 139 38.8
OB04G31400 Oryza brachyantha HOM04x5M004601 ORTHO04x5M005443 2.6e-18 97.1 224 32.1
OsR498G0409240600.01 Oryza sativa ssp. indica HOM04x5M004601 ORTHO04x5M005443 1.4e-16 91.3 332 25.6
Zm00008a014122 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 1.4e-16 91.3 106 41.5
evm.TU.AsparagusV1_04.1989.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 6.0e-15 85.9 72 55.6
Zm00007a00052093 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 5.0e-14 82.8 85 41.2
Misin05G212300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 1.1e-13 81.6 85 41.2
ASH_gene14619 Apostasia shenzhenica HOM04x5M004601 ORTHO04x5M005443 3.3e-13 80.1 251 25.5
Zm00008a006350 Zea mays PH207 HOM04x5M004601 ORTHO04x5M005443 4.3e-13 79.7 193 31.1
ATR0749G026 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 1.1e-11 75.1 56 66.1
Misin05G212200 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 2.3e-11 73.9 188 30.3
Sspon.03G0031770-3D Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 2.0e-10 70.9 232 28.0
CALSI_Maker00003384 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 2.6e-10 70.5 73 43.8
CALSI_Maker00023721 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 7.5e-10 68.9 67 46.3
Zm00007a00029334 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 6.4e-09 65.9 73 38.4
CALSI_Maker00001347 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 3.5e-07 60.1 67 41.8

Amborella trichopoda (6 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (3 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (6 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (6 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (3 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (3 genes)
Picea abies (6 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (6 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (4 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (3 genes)
Zea mays B73 (3 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (5 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

Program Settings