Interactive Phylogenetics Module

Gene Id
Potri.003G143700

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G143700 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1499.6 731 100.0
Potri.001G087400 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1438.3 731 95.8
Solyc08g082830.2 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1315.4 733 86.1
GSVIVG01019608001 Vitis vinifera HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1297.7 732 85.9
AT1G55090 Arabidopsis thaliana HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1283.9 731 83.7
p5.00_sc00006_p0154 Elaeis guineensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1217.2 731 80.0
evm.TU.AsparagusV1_07.3669.V1.1 Asparagus officinalis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1208.7 729 78.5
CALSI_Maker00005878 Calamus simplicifolius HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1206.8 734 78.6
Aco003438 Ananas comosus HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1200.7 736 77.7
Sobic.002G112700 Sorghum bicolor HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1179.1 735 77.0
Misin04G109200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1177.5 735 77.0
Zm00008a008470 Zea mays PH207 HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1177.2 734 76.8
Misin03G098200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1175.2 735 76.9
Seita.2G110200 Setaria italica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1172.5 735 76.6
Sspon.02G0020200-1A Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1169.8 732 77.2
Ma02_g07730 Musa acuminata HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1168.7 734 75.6
OB07G13280 Oryza brachyantha HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1163.3 734 76.3
OsR498G0713585300.01 Oryza sativa ssp. indica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1162.9 734 76.2
LOC_Os07g07260 Oryza sativa ssp. japonica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1161.7 734 76.0
Spipo4G0085100 Spirodela polyrhiza HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1161.7 733 75.4
LP027001 Lolium perenne HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1160.2 736 75.3
TraesCS3B02G090300 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1157.5 738 75.5
Bradi1g29020 Brachypodium distachyon HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1157.1 740 75.1
TraesCS3A02G076400 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1156.0 738 75.3
TraesCS3D02G076500 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1154.4 738 75.5
HORVU3Hr1G013640 Hordeum vulgare HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1154.0 738 75.3
Zosma8g00780 Zostera marina HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1152.9 698 79.7
PEQU_08732 Phalaenopsis equestris HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1152.1 734 75.3
ATR1098G082 Amborella trichopoda HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1138.6 704 77.4
Zm00001d005157 Zea mays B73 HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1097.4 734 73.2
Sspon.02G0020200-3C Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1093.6 722 74.2
ASH_gene8283 Apostasia shenzhenica HOM04x5M005046 ORTHO04x5M006164 1.5e-307 1057.7 659 76.2
TRITD3Bv1G024720 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 1.4e-305 1051.2 737 70.0
TRITD3Av1G021090 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 1.4e-305 1051.2 737 70.0
gene17841 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 3.8e-290 1000.0 732 65.8
gene29750 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 1.9e-289 997.7 732 66.0
Mapoly0035s0052 Marchantia polymorpha HOM04x5M005046 ORTHO04x5M006164 3.1e-284 980.3 736 65.1
MCO17G006 Micromonas commoda HOM04x5M005046 ORTHO04x5M006164 4.9e-261 903.3 690 62.6
Pp3c17_21910 Physcomitrium patens HOM04x5M005046 ORTHO04x5M006164 6.6e-258 892.9 669 64.7
gene12860 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 2.2e-253 877.9 697 61.0
gene4078 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 8.3e-253 875.9 697 60.8
Cre10.g435250 Chlamydomonas reinhardtii HOM04x5M005046 ORTHO04x5M006164 6.0e-235 816.6 783 53.6
PAB00015820 Picea abies HOM04x5M005046 ORTHO04x5M006164 1.9e-172 609.0 413 72.4
Sspon.02G0020200-4D Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 2.7e-166 588.6 377 73.7
PH01002232G0310 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 8.6e-165 583.6 359 78.6
PH01002232G0290 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 9.5e-156 553.5 407 65.8
Oropetium_20150105_11454 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 2.0e-145 519.2 318 80.2
Oropetium_20150105_11453 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 4.6e-134 481.5 321 69.8
Zm00007a00049707 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 8.9e-130 467.2 332 71.7
PH01000031G0760 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 1.3e-115 420.2 277 75.1
Zm00007a00051183 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 2.1e-110 402.9 264 72.3
Sspon.02G0020200-2B Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 2.7e-94 349.4 195 86.2
Zjn_sc00077.1.g00130.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005046 ORTHO04x5M006164 2.8e-43 179.9 241 42.3
PH01000031G0750 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 5.9e-41 172.2 120 71.7
Pgl_GLEAN_10033649 Cenchrus americanus HOM04x5M005046 ORTHO04x5M006164 6.6e-24 115.5 66 75.8
evm.TU.AsparagusV1_05.1844.V1.1 Asparagus officinalis HOM04x5M001700 ORTHO04x5M004467 1.6e-22 110.9 66 75.8
Solyc06g071240.1 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 1.1e-21 108.2 130 51.5
PAB00013173 Picea abies HOM04x5M005046 ORTHO04x5M006164 1.5e-20 104.4 64 75.0
Zjn_sc00077.1.g00140.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005046 ORTHO04x5M006164 2.8e-14 83.6 76 59.2

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (1 genes)
Picea abies (2 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings