Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.001G125800 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 5.4e-291 1002.3 516 100.0
Potri.003G107900 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 1.2e-261 904.8 524 89.5
GSVIVG01014046001 Vitis vinifera HOM04x5M003245 ORTHO04x5M005668 6.4e-175 616.7 498 63.1
Solyc03g093310.2 Solanum lycopersicum HOM04x5M003245 ORTHO04x5M005668 3.0e-164 581.3 486 59.5
AT5G51380 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 3.2e-158 561.2 429 64.6
AT5G51370 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 1.7e-151 538.9 423 61.9
Potri.002G143200 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 2.7e-149 531.6 435 58.6
ATR0317G122 Amborella trichopoda HOM04x5M003245 ORTHO04x5M005668 1.4e-145 519.2 512 51.0
p5.00_sc00002_p0220 Elaeis guineensis HOM04x5M003245 ORTHO04x5M005668 2.4e-145 518.5 495 55.8
Solyc01g095800.2 Solanum lycopersicum HOM04x5M003245 ORTHO04x5M005668 5.3e-145 517.3 422 59.5
Spipo11G0034400 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 2.0e-144 515.4 427 60.4
Ma04_g20220 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 2.2e-143 511.9 501 54.3
PAB00017842 Picea abies HOM04x5M003245 ORTHO04x5M005668 3.0e-140 501.5 435 56.1
Spipo17G0022500 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 3.9e-140 501.1 425 58.6
Aco012817 Ananas comosus HOM04x5M003245 ORTHO04x5M005668 8.8e-140 500.0 423 61.2
Ma05_g13320 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 8.8e-140 500.0 422 59.2
AT5G07670 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 5.9e-136 487.3 425 58.8
PEQU_14480 Phalaenopsis equestris HOM04x5M003245 ORTHO04x5M005668 3.7e-130 468.0 430 58.1
Ma04_g36850 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 4.1e-129 464.5 500 51.0
Zosma85g00440 Zostera marina HOM04x5M003245 ORTHO04x5M005668 3.2e-126 454.9 421 55.1
Oropetium_20150105_21240 Oropetium thomaeum HOM04x5M003245 ORTHO04x5M005668 2.3e-124 448.7 433 53.8
CALSI_Maker00016894 Calamus simplicifolius HOM04x5M003245 ORTHO04x5M005668 5.2e-124 447.6 311 68.5
TraesCS6D02G231500 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 2.0e-123 445.7 429 53.8
HORVU6Hr1G063100 Hordeum vulgare HOM04x5M003245 ORTHO04x5M005668 3.4e-123 444.9 429 53.6
TraesCS6B02G275600 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 3.4e-123 444.9 429 53.8
TRITD6Bv1G145190 Triticum turgidum HOM04x5M003245 ORTHO04x5M005668 3.4e-123 444.9 429 53.8
Sspon.01G0000930-1P Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 7.5e-123 443.7 426 53.8
TraesCS6A02G249800 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 9.8e-123 443.4 426 54.0
TRITD6Av1G159240 Triticum turgidum HOM04x5M003245 ORTHO04x5M005668 9.8e-123 443.4 426 54.0
Zm00001d017492 Zea mays B73 HOM04x5M003245 ORTHO04x5M005668 1.1e-121 439.9 435 52.9
Zm00007a00015682 Zea mays B104 HOM04x5M003245 ORTHO04x5M005668 1.1e-121 439.9 435 52.9
LP006587 Lolium perenne HOM04x5M003245 ORTHO04x5M005668 2.4e-121 438.7 426 53.3
Seita.1G260300 Setaria italica HOM04x5M003245 ORTHO04x5M005668 2.4e-121 438.7 436 52.5
Misin08G230600 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 3.1e-121 438.3 435 52.4
OsR498G0204455800.01 Oryza sativa ssp. indica HOM04x5M003245 ORTHO04x5M005668 3.1e-121 438.3 429 53.4
LOC_Os02g44104 Oryza sativa ssp. japonica HOM04x5M003245 ORTHO04x5M005668 4.1e-121 438.0 429 53.4
Bradi3g50726 Brachypodium distachyon HOM04x5M003245 ORTHO04x5M005668 2.0e-120 435.6 435 53.3
Misin07G434300 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 4.5e-120 434.5 427 53.4
OB02G33900 Oryza brachyantha HOM04x5M003245 ORTHO04x5M005668 1.0e-119 433.3 429 52.7
Sspon.01G0000930-3D Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 8.5e-119 430.3 426 53.1
Sspon.01G0000930-1A Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 2.5e-118 428.7 425 52.9
ASH_gene6044 Apostasia shenzhenica HOM04x5M003245 ORTHO04x5M005668 4.7e-117 424.5 481 48.6
Zosma85g00410 Zostera marina HOM04x5M003245 ORTHO04x5M005668 2.6e-115 418.7 433 49.4
PH01000995G0530 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 4.9e-114 414.5 395 53.7
gene2101 Selaginella moellendorffii HOM04x5M003245 ORTHO04x5M005668 1.7e-111 406.0 483 45.5
GSVIVG01018169001 Vitis vinifera HOM04x5M003245 ORTHO04x5M005668 2.3e-111 405.6 416 51.9
gene5137 Selaginella moellendorffii HOM04x5M003245 ORTHO04x5M005668 2.9e-111 405.2 483 45.5
Potri.014G059100 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 8.0e-109 397.1 266 68.0
PAB00008675 Picea abies HOM04x5M003245 ORTHO04x5M005668 4.4e-107 391.3 453 45.5
Pp3c14_8820 Physcomitrium patens HOM04x5M003245 ORTHO04x5M005668 1.8e-105 386.0 514 40.7
PH01003305G0030 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 8.0e-101 370.5 612 37.9
Pp3c10_7500 Physcomitrium patens HOM04x5M003245 ORTHO04x5M005668 1.4e-100 369.8 510 40.0
Zm00008a022532 Zea mays PH207 HOM04x5M003245 ORTHO04x5M005668 3.4e-99 365.2 280 61.8
Pgl_GLEAN_10009580 Cenchrus americanus HOM04x5M003245 ORTHO04x5M005668 3.7e-98 361.7 280 62.1
Sobic.004G294700 Sorghum bicolor HOM04x5M003245 ORTHO04x5M005668 5.1e-87 324.7 344 50.6
Spipo1G0082300 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 4.7e-85 318.2 340 50.6
Mapoly0089s0010 Marchantia polymorpha HOM04x5M003245 ORTHO04x5M005668 6.2e-85 317.8 580 34.5
Zjn_sc00007.1.g10190.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M003245 ORTHO04x5M005668 8.6e-79 297.4 433 41.6
p5.00_sc00023_p0055 Elaeis guineensis HOM04x5M003245 ORTHO04x5M005668 4.0e-60 235.3 308 46.4
Sspon.01G0000930-2C Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 7.7e-19 98.2 152 38.8
Sobic.001G303825 Sorghum bicolor HOM04x5M003245 ORTHO04x5M005668 2.7e-16 89.7 167 35.9
Aco009980 Ananas comosus HOM04x5M009981 ORTHO04x5M012091 1.4e-15 87.4 308 28.2
GSVIVG01035624001 Vitis vinifera HOM04x5M009981 ORTHO04x5M012091 1.5e-14 84.0 245 30.2
p5.00_sc00001_p0162 Elaeis guineensis HOM04x5M009981 ORTHO04x5M012091 2.6e-14 83.2 300 27.0
gene10300 Selaginella moellendorffii HOM04x5M001710 ORTHO04x5M001818 3.3e-14 82.8 403 25.3
gene29354 Selaginella moellendorffii HOM04x5M001710 ORTHO04x5M001818 3.3e-14 82.8 403 25.3
AT2G25490 Arabidopsis thaliana HOM04x5M001828 ORTHO04x5M001806 2.2e-13 80.1 280 23.6
AT3G50080 Arabidopsis thaliana HOM04x5M001710 ORTHO04x5M001818 3.7e-13 79.3 397 25.7
AT5G67250 Arabidopsis thaliana HOM04x5M001710 ORTHO04x5M001818 8.2e-13 78.2 391 24.8
gene29505 Selaginella moellendorffii HOM04x5M007241 ORTHO04x5M009064 8.2e-13 78.2 385 25.2
gene31603 Selaginella moellendorffii HOM04x5M007241 ORTHO04x5M009064 1.1e-12 77.8 385 25.2
gene26044 Selaginella moellendorffii HOM04x5M005490 ORTHO04x5M004478 2.4e-12 76.6 267 30.3
Aco024398 Ananas comosus HOM04x5M001710 ORTHO04x5M001818 3.1e-12 76.3 420 24.8
CALSI_Maker00015473 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 3.1e-12 76.3 433 22.9
CALSI_Maker00046348 Calamus simplicifolius HOM04x5M000398 ORTHO04x5M000623 7.0e-12 75.1 407 25.3
PAB00023311 Picea abies HOM04x5M001010 ORTHO04x5M000824 9.1e-12 74.7 412 25.2
Zjn_sc00028.1.g04240.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002561 ORTHO04x5M002801 9.1e-12 74.7 250 28.0
gene31717 Selaginella moellendorffii HOM04x5M005490 ORTHO04x5M004478 1.6e-11 73.9 267 28.8
Spipo5G0012500 Spirodela polyrhiza HOM04x5M013795 ORTHO04x5M014864 2.0e-11 73.6 235 25.5
AT4G07400 Arabidopsis thaliana HOM04x5M001710 ORTHO04x5M001818 2.7e-11 73.2 412 23.3
Ma09_g11000 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 2.7e-11 73.2 365 25.5
Misin11G135000 Miscanthus sinensis HOM04x5M001710 ORTHO04x5M001818 7.7e-11 71.6 385 23.1
GSVIVG01030257001 Vitis vinifera HOM04x5M002561 ORTHO04x5M002801 7.7e-11 71.6 233 26.2
CALSI_Maker00050381 Calamus simplicifolius HOM04x5M009981 ORTHO04x5M012091 1.0e-10 71.2 201 28.9
Ma08_g29480 Musa acuminata HOM04x5M007020 ORTHO04x5M008674 1.0e-10 71.2 399 22.6
Zm00001d019677 Zea mays B73 HOM04x5M001710 ORTHO04x5M001818 1.3e-10 70.9 451 23.9
Zm00007a00007249 Zea mays B104 HOM04x5M001710 ORTHO04x5M001818 1.3e-10 70.9 451 23.9
Potri.005G141800 Populus trichocarpa HOM04x5M001710 ORTHO04x5M001818 1.7e-10 70.5 425 23.1
Potri.002G123100 Populus trichocarpa HOM04x5M001710 ORTHO04x5M001818 2.9e-10 69.7 395 23.0
p5.00_sc00004_p0111 Elaeis guineensis HOM04x5M001710 ORTHO04x5M001818 6.5e-10 68.6 410 22.9
Mapoly0010s0090 Marchantia polymorpha HOM04x5M002561 ORTHO04x5M002801 6.5e-10 68.6 369 22.0
GSVIVG01017859001 Vitis vinifera HOM04x5M005490 ORTHO04x5M004478 8.5e-10 68.2 269 28.3
Potri.014G023500 Populus trichocarpa HOM04x5M001710 ORTHO04x5M001818 2.5e-09 66.6 396 25.0
AT4G15475 Arabidopsis thaliana HOM04x5M005490 ORTHO04x5M004478 3.2e-09 66.2 247 27.1
p5.00_sc00198_p0026 Elaeis guineensis HOM04x5M002638 ORTHO04x5M007717 3.2e-09 66.2 235 25.5
ATR0490G002 Amborella trichopoda HOM04x5M001710 ORTHO04x5M001818 4.2e-09 65.9 210 29.0
Ma08_g19870 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 5.5e-09 65.5 379 24.8
gene37033 Selaginella moellendorffii HOM04x5M000398 ORTHO04x5M000623 5.5e-09 65.5 432 23.8
Sspon.03G0021410-2B Saccharum spontaneum HOM04x5M002561 ORTHO04x5M002801 5.5e-09 65.5 192 26.6
CALSI_Maker00037739 Calamus simplicifolius HOM04x5M000398 ORTHO04x5M000623 7.2e-09 65.1 387 23.0
Spipo25G0007500 Spirodela polyrhiza HOM04x5M001710 ORTHO04x5M001818 7.2e-09 65.1 412 22.6
p5.00_sc00211_p0008 Elaeis guineensis HOM04x5M000398 ORTHO04x5M000623 1.2e-08 64.3 364 21.2
gene11205 Selaginella moellendorffii HOM04x5M001710 ORTHO04x5M001818 1.2e-08 64.3 428 24.8
gene17980 Selaginella moellendorffii HOM04x5M000398 ORTHO04x5M000623 1.2e-08 64.3 432 23.8
CALSI_Maker00010146 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 1.6e-08 63.9 401 23.2
CALSI_Maker00037456 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 1.6e-08 63.9 401 23.2
gene8715 Selaginella moellendorffii HOM04x5M002561 ORTHO04x5M002801 1.6e-08 63.9 369 24.1
gene4269 Selaginella moellendorffii HOM04x5M002561 ORTHO04x5M002801 1.6e-08 63.9 370 24.3
TraesCS2A02G359900 Triticum aestivum HOM04x5M001710 ORTHO04x5M001818 1.6e-08 63.9 361 23.0
ASH_gene3870 Apostasia shenzhenica HOM04x5M001710 ORTHO04x5M001818 2.7e-08 63.2 421 21.9
OB04G18050 Oryza brachyantha HOM04x5M000398 ORTHO04x5M000623 3.6e-08 62.8 375 25.6
Potri.006G238300 Populus trichocarpa HOM04x5M009981 ORTHO04x5M012091 3.6e-08 62.8 352 25.0
Spipo21G0000800 Spirodela polyrhiza HOM04x5M001828 ORTHO04x5M001806 3.6e-08 62.8 190 26.8
CALSI_Maker00027207 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 6.1e-08 62.0 235 25.1
CALSI_Maker00027201 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 6.1e-08 62.0 235 25.1
Misin03G123700 Miscanthus sinensis HOM04x5M001710 ORTHO04x5M001818 6.1e-08 62.0 242 26.0
Potri.017G053400 Populus trichocarpa HOM04x5M001010 ORTHO04x5M000824 6.1e-08 62.0 201 26.4
GSVIVG01017521001 Vitis vinifera HOM04x5M001010 ORTHO04x5M000824 6.1e-08 62.0 390 24.6
Solyc03g044220.1 Solanum lycopersicum HOM04x5M001710 ORTHO04x5M001818 8.0e-08 61.6 397 22.2
gene30457 Selaginella moellendorffii HOM04x5M001710 ORTHO04x5M001818 8.0e-08 61.6 407 23.1
Pp3c20_4050 Physcomitrium patens HOM04x5M000398 ORTHO04x5M181511 1.0e-07 61.2 404 24.3
Sspon.04G0009050-3D Saccharum spontaneum HOM04x5M007241 ORTHO04x5M009064 1.0e-07 61.2 421 24.2
Ma04_g12920 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 1.4e-07 60.8 438 21.0
p5.00_sc14261_p0001 Elaeis guineensis HOM04x5M001710 ORTHO04x5M001818 1.8e-07 60.5 132 34.1
evm.TU.AsparagusV1_09.504.V1.1 Asparagus officinalis HOM04x5M007020 ORTHO04x5M008674 3.0e-07 59.7 171 29.2
gene429 Selaginella moellendorffii HOM04x5M002561 ORTHO04x5M002801 3.0e-07 59.7 242 22.7
ATR0602G021 Amborella trichopoda HOM04x5M005129 ORTHO04x5M007169 4.0e-07 59.3 197 27.9
gene417 Selaginella moellendorffii HOM04x5M002561 ORTHO04x5M002801 4.0e-07 59.3 126 32.5
gene8159 Selaginella moellendorffii HOM04x5M002561 ORTHO04x5M002801 4.0e-07 59.3 126 32.5
TraesCS4D02G148000 Triticum aestivum HOM04x5M005490 ORTHO04x5M004478 4.0e-07 59.3 283 26.9
LP026565 Lolium perenne HOM04x5M006240 ORTHO04x5M008259 5.2e-07 58.9 123 26.0
Misin04G136500 Miscanthus sinensis HOM04x5M001710 ORTHO04x5M001818 5.2e-07 58.9 242 25.6
Oropetium_20150105_06205 Oropetium thomaeum HOM04x5M001710 ORTHO04x5M001818 6.8e-07 58.5 435 22.1
CALSI_Maker00044058 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 1.2e-06 57.8 132 32.6
OB03G16510 Oryza brachyantha HOM04x5M000398 ORTHO04x5M000623 1.5e-06 57.4 226 27.9
PAB00028759 Picea abies HOM04x5M001710 ORTHO04x5M001818 1.5e-06 57.4 158 27.2
Sobic.004G202700 Sorghum bicolor HOM04x5M007241 ORTHO04x5M009064 1.5e-06 57.4 315 24.8
Sspon.04G0024290-1B Saccharum spontaneum HOM04x5M001801 ORTHO04x5M000731 2.0e-06 57.0 375 19.2
Spipo13G0014700 Spirodela polyrhiza HOM04x5M007020 ORTHO04x5M008674 2.6e-06 56.6 236 28.0
Spipo23G0043100 Spirodela polyrhiza HOM04x5M002561 ORTHO04x5M002801 3.4e-06 56.2 158 25.9
CALSI_Maker00012362 Calamus simplicifolius HOM04x5M000398 ORTHO04x5M000623 4.4e-06 55.8 165 29.1
CALSI_Maker00033549 Calamus simplicifolius HOM04x5M000398 ORTHO04x5M000623 4.4e-06 55.8 161 29.8
PH01000038G1830 Phyllostachys edulis HOM04x5M000398 ORTHO04x5M000623 4.4e-06 55.8 226 26.1
Pp3c14_26462 Physcomitrium patens HOM04x5M001710 ORTHO04x5M001818 4.4e-06 55.8 195 26.2
Pp3c14_26460 Physcomitrium patens HOM04x5M001710 ORTHO04x5M001818 4.4e-06 55.8 195 26.2
Pgl_GLEAN_10032906 Cenchrus americanus HOM04x5M001710 ORTHO04x5M001818 5.7e-06 55.5 130 36.9
Ma09_g23070 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 5.7e-06 55.5 132 32.6
Oropetium_20150105_12048 Oropetium thomaeum HOM04x5M001710 ORTHO04x5M001818 5.7e-06 55.5 121 30.6
Spipo6G0036000 Spirodela polyrhiza HOM04x5M005490 ORTHO04x5M004478 5.7e-06 55.5 162 27.8
Pp3c17_21920 Physcomitrium patens HOM04x5M001710 ORTHO04x5M001818 9.8e-06 54.7 214 25.7

Amborella trichopoda (3 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (8 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (12 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (7 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (8 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (6 genes)
Picea abies (4 genes)
Populus trichocarpa (9 genes)
Saccharum spontaneum (7 genes)
Selaginella moellendorffii (17 genes)
Setaria italica (1 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (9 genes)
Triticum aestivum (5 genes)
Triticum turgidum (2 genes)
Vitis vinifera (6 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)